Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 7.8e-43 176.8 93 100.0
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 6.2e-32 140.6 91 73.6
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 2.3e-31 138.7 93 73.1
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 4.0e-31 137.9 91 74.7
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.2e-30 136.3 92 71.7
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 7.5e-30 133.7 93 69.9
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 1.7e-29 132.5 93 68.8
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 2.9e-29 131.7 96 67.7
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 3.7e-29 131.3 79 79.7
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 4.9e-29 131.0 96 66.7
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 1.9e-28 129.0 94 67.0
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 2.4e-28 128.6 95 68.4
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 2.4e-28 128.6 93 68.8
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 7.1e-28 127.1 93 65.6
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 9.2e-28 126.7 93 66.7
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.2e-27 126.3 93 66.7
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.2e-27 126.3 93 66.7
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 1.2e-27 126.3 91 65.9
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 2.1e-27 125.6 91 67.0
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 2.1e-27 125.6 93 67.7
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 2.1e-27 125.6 88 69.3
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 2.7e-27 125.2 77 79.2
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 4.6e-27 124.4 93 65.6
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 6.0e-27 124.0 94 69.1
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 6.0e-27 124.0 92 63.0
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 6.0e-27 124.0 80 77.5
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 7.8e-27 123.6 93 67.7
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 1.7e-26 122.5 96 69.8
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 1.7e-26 122.5 89 62.9
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.7e-26 122.5 89 62.9
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.7e-26 122.5 92 63.0
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.7e-26 122.5 77 79.2
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 3.0e-26 121.7 91 63.7
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 3.9e-26 121.3 89 70.8
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.9e-26 121.3 89 64.0
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 3.9e-26 121.3 88 67.0
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 5.1e-26 120.9 90 62.2
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 5.1e-26 120.9 91 67.0
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 6.6e-26 120.6 86 65.1
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 8.6e-26 120.2 87 65.5
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 8.6e-26 120.2 88 65.9
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.1e-25 119.8 89 60.7
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 1.5e-25 119.4 91 63.7
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 1.5e-25 119.4 93 66.7
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 1.5e-25 119.4 88 67.0
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.9e-25 119.0 86 65.1
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 2.5e-25 118.6 91 63.7
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 2.5e-25 118.6 88 64.8
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 2.5e-25 118.6 89 62.9
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 3.3e-25 118.2 93 64.5
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 4.3e-25 117.9 93 64.5
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 4.3e-25 117.9 74 73.0
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 7.3e-25 117.1 94 61.7
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 9.5e-25 116.7 92 60.9
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 2.1e-24 115.5 94 61.7
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.6e-24 114.8 86 62.8
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 6.2e-24 114.0 88 60.2
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 1.1e-23 113.2 89 59.6
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 1.4e-23 112.8 91 60.4
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 1.4e-23 112.8 91 60.4
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 1.4e-23 112.8 87 60.9
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 1.4e-23 112.8 93 59.1
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 2.3e-23 112.1 91 60.4
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 3.1e-23 111.7 89 60.7
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 5.2e-23 110.9 91 60.4
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 6.8e-23 110.5 88 59.1
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 8.9e-23 110.2 89 61.8
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 8.9e-23 110.2 87 65.5
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 1.2e-22 109.8 72 72.2
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 1.2e-22 109.8 87 65.5
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.5e-22 109.4 94 61.7
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 1.5e-22 109.4 84 60.7
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 2.0e-22 109.0 91 60.4
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 2.6e-22 108.6 91 58.2
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 2.6e-22 108.6 87 64.4
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 7.6e-22 107.1 93 58.1
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 7.6e-22 107.1 81 64.2
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 4.9e-21 104.4 74 68.9
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 5.4e-20 100.9 107 52.3
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 5.4e-20 100.9 71 67.6
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 5.1e-18 94.4 66 66.7
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 8.6e-18 93.6 69 58.0
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 8.6e-18 93.6 65 67.7
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 6.8e-15 84.0 81 54.3
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 2.6e-14 82.0 78 47.4
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 2.4e-12 75.5 49 69.4
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 9.3e-12 73.6 47 70.2
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 1.6e-11 72.8 50 68.0
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 1.0e-10 70.1 51 64.7
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 6.6e-10 67.4 69 49.3
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 6.2e-08 60.8 41 63.4
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 9.9e-06 53.5 43 60.5


User provided reference genes

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