Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017804001 Vitis vinifera HOM05D003864 ORTHO05D004658 9.4e-242 839.7 411 100.0
Haze_01063 Corylus avellana HOM05D003864 ORTHO05D004658 1.4e-144 516.9 317 80.1
Cfa015492 Carpinus fangiana HOM05D003864 ORTHO05D004658 2.7e-140 502.7 346 74.9
Sabra08G0157300 Salix brachista HOM05D003864 ORTHO05D004658 1.0e-139 500.7 319 76.5
TAR362G0395 Trochodendron aralioides HOM05D003864 ORTHO05D004658 1.0e-139 500.7 308 78.6
TAR633G1069 Trochodendron aralioides HOM05D003864 ORTHO05D004658 3.0e-139 499.2 288 82.3
Actinidia23428 Actinidia chinensis HOM05D003864 ORTHO05D004658 3.3e-138 495.7 340 72.1
Nn4g25986 Nelumbo nucifera HOM05D003864 ORTHO05D004658 3.3e-138 495.7 343 71.4
Potri.008G204700 Populus trichocarpa HOM05D003864 ORTHO05D004658 1.3e-137 493.8 311 76.5
Prupe.1G142000 Prunus persica HOM05D003864 ORTHO05D004658 1.7e-137 493.4 289 81.7
Nn3g21324 Nelumbo nucifera HOM05D003864 ORTHO05D004658 1.2e-135 487.3 328 71.6
CiPaw.01G152900 Carya illinoinensis HOM05D003864 ORTHO05D004658 3.5e-135 485.7 288 80.6
ClCG06G005360 Citrullus lanatus HOM05D003864 ORTHO05D004658 1.0e-134 484.2 292 77.7
CiPaw.02G086600 Carya illinoinensis HOM05D003864 ORTHO05D004658 2.2e-134 483.0 290 79.7
Lj6A670T81 Lonicera japonica HOM05D003864 ORTHO05D004658 2.2e-134 483.0 337 72.7
Manes.15G016900 Manihot esculenta HOM05D003864 ORTHO05D004658 2.2e-134 483.0 296 77.7
Sed0008062 Sechium edule HOM05D003864 ORTHO05D004658 1.1e-133 480.7 343 70.6
Ciclev10005325m.g Citrus clementina HOM05D003864 ORTHO05D004658 1.5e-133 480.3 348 69.5
Dinv38324 Davidia involucrata HOM05D003864 ORTHO05D004658 1.5e-133 480.3 333 73.9
Manes.03G191300 Manihot esculenta HOM05D003864 ORTHO05D004658 1.5e-133 480.3 287 79.1
Eucgr.B01266 Eucalyptus grandis HOM05D003864 ORTHO05D004658 1.9e-133 479.9 299 77.6
MELO3C021355.2 Cucumis melo HOM05D003864 ORTHO05D004658 5.5e-133 478.4 292 76.4
TWI53G0015 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 9.4e-133 477.6 292 77.7
TWI53G1008 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 9.4e-133 477.6 292 77.7
CsaV3_6G017400 Cucumis sativus L. HOM05D003864 ORTHO05D004658 2.7e-132 476.1 292 75.7
Cc03_g02350 Coffea canephora HOM05D003864 ORTHO05D004658 3.6e-132 475.7 280 78.6
Nitab4.5_0004537g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 8.0e-132 474.6 291 76.6
Sed0015457 Sechium edule HOM05D003864 ORTHO05D004658 1.0e-131 474.2 345 69.3
Atru.chr4.2755 Acer truncatum HOM05D003864 ORTHO05D004658 2.3e-131 473.0 303 74.6
MSTRG.10054 Avicennia marina HOM05D003864 ORTHO05D004658 2.3e-131 473.0 323 71.8
Sc19g0004950 Simmondsia chinensis HOM05D003864 ORTHO05D004658 1.5e-130 470.3 349 67.9
PSO210G7573 Papaver somniferum HOM05D003864 ORTHO05D004658 2.6e-130 469.5 318 72.6
Thecc.04G277700 Theobroma cacao HOM05D003864 ORTHO05D004658 2.6e-130 469.5 349 68.5
Duzib151G0071 Durio zibethinus HOM05D003864 ORTHO05D004658 5.7e-130 468.4 311 72.0
Peaxi162Scf00033g01410 Petunia axillaris HOM05D003864 ORTHO05D004658 2.2e-129 466.5 353 65.7
PGR004G1016 Punica granatum HOM05D003864 ORTHO05D004658 4.8e-129 465.3 307 71.7
vmacro08202 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 4.8e-129 465.3 293 76.1
PSO170G3769 Papaver somniferum HOM05D003864 ORTHO05D004658 6.3e-129 464.9 318 72.0
Solyc01g067630.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 5.3e-128 461.8 287 76.3
FvH4_4g17200 Fragaria vesca HOM05D003864 ORTHO05D004658 9.1e-128 461.1 314 72.0
PGR031G0559 Punica granatum HOM05D003864 ORTHO05D004658 9.1e-128 461.1 344 67.4
Aqoxy2G03115 Aquilegia oxysepala HOM05D003864 ORTHO05D004658 1.2e-127 460.7 378 62.7
CAN.G256.9 Capsicum annuum HOM05D003864 ORTHO05D004658 1.0e-126 457.6 296 73.6
PGSC0003DMG400030786 Solanum tuberosum HOM05D003864 ORTHO05D004658 1.3e-126 457.2 288 74.7
Gorai.011G185900 Gossypium raimondii HOM05D003864 ORTHO05D004658 2.2e-126 456.4 315 70.8
Nitab4.5_0001054g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 2.2e-126 456.4 375 62.9
Gohir.D10G166700 Gossypium hirsutum HOM05D003864 ORTHO05D004658 1.1e-125 454.1 315 70.5
Nitab4.5_0000784g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 9.4e-125 451.1 282 74.8
Gohir.A10G101440 Gossypium hirsutum HOM05D003864 ORTHO05D004658 1.2e-124 450.7 314 70.1
RcHm_v2.0_Chr4g0421021 Rosa chinensis HOM05D003864 ORTHO05D004658 1.0e-123 447.6 350 65.4
arahy.Tifrunner.gnm1.ann1.CLS5KG Arachis hypogaea HOM05D003864 ORTHO05D004658 1.8e-123 446.8 299 69.2
CDE01G0506 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.8e-123 446.8 330 66.7
Nitab4.5_0001459g0140 Nicotiana tabacum HOM05D003864 ORTHO05D004658 2.3e-123 446.4 360 64.4
THA.LOC104820237 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 8.8e-123 444.5 338 67.8
THA.LOC104821766 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 1.2e-122 444.1 336 66.4
Lj4g0016445 Lotus japonicus HOM05D003864 ORTHO05D004658 2.0e-122 443.4 298 70.8
LjContig00389g0005087 Lotus japonicus HOM05D003864 ORTHO05D004658 2.6e-122 443.0 300 71.0
AL4G36380 Arabidopsis lyrata HOM05D003864 ORTHO05D004658 8.3e-121 438.0 290 71.4
Phvul.002G188400 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 9.1e-120 434.5 313 67.4
A03p21870 Brassica napus HOM05D003864 ORTHO05D004658 1.2e-119 434.1 295 69.5
MD13G1173800 Malus domestica HOM05D003864 ORTHO05D004658 2.0e-119 433.3 289 73.4
Glyma.13G215300 Glycine max HOM05D003864 ORTHO05D004658 5.9e-119 431.8 295 70.8
Glyma.05G133900 Glycine max HOM05D003864 ORTHO05D004658 7.7e-119 431.4 277 72.9
Cpa.g.sc1008.4 Carica papaya HOM05D003864 ORTHO05D004658 1.0e-118 431.0 339 65.2
Glyma.08G088600 Glycine max HOM05D003864 ORTHO05D004658 1.3e-118 430.6 297 70.0
Phvul.006G161500 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 1.3e-118 430.6 269 74.3
Lalb_Chr20g0118111 Lupinus albus HOM05D003864 ORTHO05D004658 1.7e-118 430.3 348 63.5
Rhsim02G0013600 Rhododendron simsii HOM05D003864 ORTHO05D004658 2.2e-118 429.9 348 64.4
BraA03t11423Z Brassica rapa HOM05D003864 ORTHO05D004658 2.9e-118 429.5 296 69.3
Migut.G00209 Erythranthe guttata HOM05D003864 ORTHO05D004658 3.8e-118 429.1 288 70.5
Ca_18234_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 6.5e-118 428.3 352 61.9
Oeu044793.1 Olea europaea HOM05D003864 ORTHO05D004658 2.5e-117 426.4 268 73.5
TPR.G23836 Trifolium pratense HOM05D003864 ORTHO05D004658 2.5e-117 426.4 299 68.6
C03p25940 Brassica napus HOM05D003864 ORTHO05D004658 3.2e-117 426.0 336 63.4
Glyma.15G097900 Glycine max HOM05D003864 ORTHO05D004658 4.2e-117 425.6 285 71.2
BraA05t19685Z Brassica rapa HOM05D003864 ORTHO05D004658 5.5e-117 425.2 328 64.9
ECA240G1720 Erigeron canadensis HOM05D003864 ORTHO05D004658 7.2e-117 424.9 287 69.7
Ca_00573_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 6.1e-116 421.8 276 70.7
TPR.G1486 Trifolium pratense HOM05D003864 ORTHO05D004658 6.1e-116 421.8 265 73.2
Sp4g21430 Schrenkiella parvula HOM05D003864 ORTHO05D004658 1.0e-115 421.0 351 61.0
AT2G39080 Arabidopsis thaliana HOM05D003864 ORTHO05D004658 1.8e-115 420.2 350 61.1
arahy.Tifrunner.gnm1.ann1.ZU35GG Arachis hypogaea HOM05D003864 ORTHO05D004658 1.2e-114 417.5 307 64.8
Lalb_Chr07g0188241 Lupinus albus HOM05D003864 ORTHO05D004658 1.2e-114 417.5 303 66.3
Medtr4g094742 Medicago truncatula HOM05D003864 ORTHO05D004658 1.2e-114 417.5 318 65.1
Carub.0004s2113 Capsella rubella HOM05D003864 ORTHO05D004658 2.0e-114 416.8 336 62.8
DCAR_002443 Daucus carota HOM05D003864 ORTHO05D004658 2.0e-114 416.8 338 63.0
Lsat_1_v5_gn_5_56881 Lactuca sativa HOM05D003864 ORTHO05D004658 7.5e-114 414.8 349 61.6
Peaxi162Scf00386g00316 Petunia axillaris HOM05D003864 ORTHO05D004658 9.8e-114 414.5 312 67.3
Thhalv10016876m.g Eutrema salsugineum HOM05D003864 ORTHO05D004658 2.8e-113 412.9 336 62.5
Lalb_Chr18g0055711 Lupinus albus HOM05D003864 ORTHO05D004658 3.7e-113 412.5 300 67.3
Os01g0367100 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 4.9e-113 412.1 285 67.4
MD16G1174800 Malus domestica HOM05D003864 ORTHO05D004658 1.1e-112 411.0 341 62.8
Hund20596 Selenicereus undatus HOM05D003864 ORTHO05D004658 1.1e-112 411.0 297 67.0
Ah.12g064180 Amaranthus hybridus HOM05D003864 ORTHO05D004658 3.1e-112 409.5 331 61.9
EL10Ac6g14524 Beta vulgaris HOM05D003864 ORTHO05D004658 7.0e-112 408.3 341 60.7
Medtr2g020190 Medicago truncatula HOM05D003864 ORTHO05D004658 3.5e-111 406.0 269 70.3
BcaB01g03648 Brassica carinata HOM05D003864 ORTHO05D004658 7.7e-111 404.8 291 66.0
A05p07200 Brassica napus HOM05D003864 ORTHO05D004658 1.1e-109 401.0 301 64.8
COL.COLO4_13927 Corchorus olitorius HOM05D003864 ORTHO05D004658 4.2e-109 399.1 289 67.1
vmacro15256 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 4.2e-109 399.1 402 55.7
Rhsim04G0216400 Rhododendron simsii HOM05D003864 ORTHO05D004658 7.2e-109 398.3 395 57.0
BcaB02g09145 Brassica carinata HOM05D003864 ORTHO05D004658 2.1e-108 396.7 301 64.8
Zm00001eb131760 Zea mays HOM05D003864 ORTHO05D004658 3.6e-108 396.0 302 62.9
BcaC02g12038 Brassica carinata HOM05D003864 ORTHO05D004658 1.8e-107 393.7 333 59.2
DCAR_027110 Daucus carota HOM05D003864 ORTHO05D004658 2.3e-107 393.3 272 67.6
Hma1.2p1_0150F.1_g066600 Hydrangea macrophylla HOM05D003864 ORTHO05D004658 3.0e-107 392.9 230 80.4
Actinidia00050 Actinidia chinensis HOM05D003864 ORTHO05D004658 4.0e-107 392.5 313 63.3
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 1.2e-106 391.0 333 58.6
Zm00001eb341670 Zea mays HOM05D003864 ORTHO05D004658 2.2e-105 386.7 284 63.7
vmacro22597 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 1.1e-104 384.4 335 60.0
CDE05G0625 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.8e-104 383.6 324 58.0
SGA_v2.0_scaffold57G20242 Striga asiatica HOM05D003864 ORTHO05D004658 9.2e-104 381.3 345 58.6
C04p08610 Brassica napus HOM05D003864 ORTHO05D004658 1.6e-103 380.6 343 57.1
Psat1g187240 Pisum sativum HOM05D003864 ORTHO05D004658 2.9e-102 376.3 271 66.4
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 5.2e-99 365.5 260 67.7
HPP92_017180 Vanilla planifolia HOM05D003864 ORTHO05D004658 2.6e-98 363.2 272 62.9
ATR0706G015 Amborella trichopoda HOM05D003864 ORTHO05D004658 7.0e-96 355.1 305 60.0
SGA_v2.0_scaffold89G27550 Striga asiatica HOM05D003864 ORTHO05D004658 9.5e-93 344.7 354 53.7
VMungo0251G3051 Vigna mungo HOM05D003864 ORTHO05D004658 9.5e-93 344.7 297 57.6
MBI19_g44903_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 5.2e-91 339.0 324 56.8
Pp3c12_8620 Physcomitrium patens HOM05D003864 ORTHO05D004658 8.3e-89 331.6 265 58.1
Pp3c13_19760 Physcomitrium patens HOM05D003864 ORTHO05D004658 1.2e-87 327.8 286 52.8
FAN07G1078 Fragaria x ananassa HOM05D003864 ORTHO05D004658 3.5e-87 326.2 314 54.8
Mapoly0090s0075 Marchantia polymorpha HOM05D003864 ORTHO05D004658 4.6e-87 325.9 274 59.1
FAN17G0790 Fragaria x ananassa HOM05D003864 ORTHO05D004658 5.1e-86 322.4 306 55.2
arahy.Tifrunner.gnm1.ann1.858I9V Arachis hypogaea HOM05D003864 ORTHO05D004658 8.6e-86 321.6 346 49.7
AagrBONN_evm.TU.Sc2ySwM_344.1910 Anthoceros agrestis HOM05D003864 ORTHO05D004658 1.5e-85 320.9 267 57.3
Aa31LG5G20520 Aethionema arabicum HOM05D003864 ORTHO05D004658 5.6e-85 318.9 359 49.0
arahy.Tifrunner.gnm1.ann1.WPBE4U Arachis hypogaea HOM05D003864 ORTHO05D004658 5.6e-85 318.9 358 48.9
Dinv44425 Davidia involucrata HOM05D003864 ORTHO05D004658 5.6e-85 318.9 180 83.9
FAN22G0711 Fragaria x ananassa HOM05D003864 ORTHO05D004658 3.6e-84 316.2 320 53.4
QL06p007391 Quercus lobata HOM05D003864 ORTHO05D004658 5.8e-82 308.9 219 72.6
MBI19_g26585_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 8.4e-81 305.1 343 51.3
CARHR133840 Cardamine hirsuta HOM05D003864 ORTHO05D004658 5.1e-78 295.8 185 75.1
Sc25g0004750 Simmondsia chinensis HOM05D003864 ORTHO05D004658 3.3e-77 293.1 273 57.9
CBR_g37156 Chara braunii HOM05D003864 ORTHO05D004658 3.6e-76 289.7 300 49.0
PGSC0003DMG400010656 Solanum tuberosum HOM05D003864 ORTHO05D004658 1.8e-75 287.3 187 72.2
Sopen01g029580 Solanum pennellii HOM05D003864 ORTHO05D004658 4.4e-74 282.7 174 76.4
Solyc06g054530.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 6.4e-73 278.9 177 73.4
SalBow2G1899 Salvia bowleyana HOM05D003864 ORTHO05D004658 1.4e-72 277.7 167 76.6
SMO356G0587 Selaginella moellendorffii HOM05D003864 ORTHO05D004658 1.9e-72 277.3 264 51.9
Os01g0367400 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 5.4e-72 275.8 349 44.4
AUR62007746 Chenopodium quinoa HOM05D003864 ORTHO05D004658 1.2e-71 274.6 267 52.1
Sopen06g019600 Solanum pennellii HOM05D003864 ORTHO05D004658 1.6e-71 274.2 232 59.5
AUR62002937 Chenopodium quinoa HOM05D003864 ORTHO05D004658 2.1e-68 263.8 340 43.5
CSS0001944 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.4e-67 261.2 184 70.1
CSS0038005 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.8e-67 260.8 184 70.1
Psat7g088240 Pisum sativum HOM05D003864 ORTHO05D004658 1.8e-67 260.8 183 68.3
BolC3t14979H Brassica oleracea HOM05D003864 ORTHO05D004658 5.8e-66 255.8 227 59.0
unitig_748.g8369 Utricularia gibba HOM05D000472 ORTHO05D000344 1.3e-65 254.6 176 70.5
FAN12G3853 Fragaria x ananassa HOM05D003864 ORTHO05D004658 1.9e-64 250.8 250 52.4
SHI00297 Sapria himalayana HOM05D003864 ORTHO05D004658 1.7e-62 244.2 497 34.0
C04p08680 Brassica napus HOM05D003864 ORTHO05D004658 1.4e-59 234.6 174 64.9
HanXRQChr13g0411231 Helianthus annuus HOM05D003864 ORTHO05D004658 1.6e-52 211.1 189 58.2
Cre13.g608000 Chlamydomonas reinhardtii HOM05D003864 ORTHO05D004658 8.1e-52 208.8 294 39.8
MCO15G076 Micromonas commoda HOM05D003864 ORTHO05D004658 8.1e-52 208.8 263 40.7
CDE12G0924 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 2.7e-47 193.7 134 68.7
PRCOL_00006073 Prasinoderma coloniale HOM05D003864 ORTHO05D004658 1.3e-46 191.4 354 32.5
unitig_748.g8370 Utricularia gibba HOM05D003864 ORTHO05D004658 4.3e-45 186.4 119 65.5
BcaC02g12030 Brassica carinata HOM05D003864 ORTHO05D004658 2.1e-44 184.1 108 75.0
BolC4t22460H Brassica oleracea HOM05D003864 ORTHO05D004658 2.8e-44 183.7 137 64.2
CDE12G0314 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.2e-42 178.3 105 78.1
CSS0003637 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.1e-40 171.8 107 74.8
CSS0011053 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.9e-40 171.0 107 74.8
MSTRG.21813 Avicennia marina HOM05D003864 ORTHO05D004658 5.5e-40 169.5 111 71.2
HanXRQChr13g0411221 Helianthus annuus HOM05D003864 ORTHO05D004658 1.2e-39 168.3 106 72.6
SEGI_14152 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 1.0e-38 165.2 130 58.5
CSS0041699 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.1e-37 161.8 189 48.7
QL06p007393 Quercus lobata HOM05D003864 ORTHO05D004658 9.0e-35 152.1 82 84.1
RcHm_v2.0_Chr4g0421071 Rosa chinensis HOM05D003864 ORTHO05D004658 2.5e-32 144.1 141 53.9
SEGI_31487 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 1.1e-27 128.6 90 62.2
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 1.3e-25 121.7 91 60.4
Actinidia25721 Actinidia chinensis HOM05D003864 ORTHO05D004658 1.2e-23 115.2 60 78.3
SEGI_13555 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 4.8e-20 103.2 74 60.8
RcHm_v2.0_Chr4g0421081 Rosa chinensis HOM05D003864 ORTHO05D004658 8.2e-20 102.4 58 81.0
CSS0015623 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.7e-17 94.7 50 84.0
CSS0047531 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D112748 6.3e-12 76.3 117 47.9
Dinv02075 Davidia involucrata HOM05D003864 ORTHO05D035062 1.4e-11 75.1 55 63.6
Zm00001eb400060 Zea mays HOM05D003864 ORTHO05D004658 3.1e-11 73.9 51 68.6
Dinv08007 Davidia involucrata HOM05D003864 ORTHO05D035062 1.6e-10 71.6 53 62.3
Medtr8g027510 Medicago truncatula HOM05D003864 ORTHO05D004658 1.7e-09 68.2 40 82.5


User provided reference genes

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