Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017783001 Vitis vinifera HOM05D005803 ORTHO05D008090 0.0e+00 1084.7 561 100.0
Hma1.2p1_0698F.1_g205430 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 2.4e-280 968.4 561 87.9
CSS0017376 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 1.2e-276 956.1 561 86.6
CSS0035312 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 1.2e-276 956.1 561 86.6
Cfa015360 Carpinus fangiana HOM05D005803 ORTHO05D008090 7.5e-274 946.8 561 85.7
Ciclev10004654m.g Citrus clementina HOM05D005803 ORTHO05D008090 5.4e-272 940.6 562 84.3
CsaV3_6G017350 Cucumis sativus L. HOM05D005803 ORTHO05D008090 1.6e-271 939.1 561 85.0
Thecc.04G279700 Theobroma cacao HOM05D005803 ORTHO05D008090 1.3e-270 936.0 562 84.7
Dinv44408 Davidia involucrata HOM05D005803 ORTHO05D008090 1.9e-269 932.2 561 84.5
QL06p007721 Quercus lobata HOM05D005803 ORTHO05D008090 4.2e-269 931.0 560 84.3
Haze_01246 Corylus avellana HOM05D005803 ORTHO05D008090 2.3e-267 925.2 600 79.7
PGR031G1735 Punica granatum HOM05D005803 ORTHO05D008090 3.4e-266 921.4 562 82.7
TWI09G0274 Tripterygium wilfordii HOM05D005803 ORTHO05D008090 4.4e-266 921.0 563 84.5
Gohir.A10G161600 Gossypium hirsutum HOM05D005803 ORTHO05D008090 9.8e-266 919.8 562 83.8
RcHm_v2.0_Chr4g0421441 Rosa chinensis HOM05D005803 ORTHO05D008090 2.8e-265 918.3 561 84.1
Manes.15G015300 Manihot esculenta HOM05D005803 ORTHO05D008090 6.3e-265 917.1 561 83.6
Prupe.1G140200 Prunus persica HOM05D005803 ORTHO05D008090 6.3e-265 917.1 561 83.6
Actinidia40241 Actinidia chinensis HOM05D005803 ORTHO05D008090 1.1e-264 916.4 557 84.6
Potri.008G215100 Populus trichocarpa HOM05D005803 ORTHO05D008090 1.2e-263 912.9 561 83.8
Sopen01g029400 Solanum pennellii HOM05D005803 ORTHO05D008090 1.2e-263 912.9 562 82.4
Sabra08G0155700 Salix brachista HOM05D005803 ORTHO05D008090 2.7e-263 911.8 561 83.4
Nn3g21354 Nelumbo nucifera HOM05D005803 ORTHO05D008090 1.7e-262 909.1 562 82.6
ClCG06G005310 Citrullus lanatus HOM05D005803 ORTHO05D008090 2.3e-262 908.7 626 76.5
Gorai.011G187600 Gossypium raimondii HOM05D005803 ORTHO05D008090 6.6e-262 907.1 562 82.7
Potri.010G022100 Populus trichocarpa HOM05D005803 ORTHO05D008090 1.5e-261 906.0 561 83.4
Lj6g0003207 Lotus japonicus HOM05D005803 ORTHO05D008090 3.3e-261 904.8 561 81.6
Peaxi162Scf00386g00615 Petunia axillaris HOM05D005803 ORTHO05D008090 5.6e-261 904.0 562 82.6
CiPaw.01G151500 Carya illinoinensis HOM05D005803 ORTHO05D008090 4.7e-260 901.0 561 82.0
MD16G1173300 Malus domestica HOM05D005803 ORTHO05D008090 8.0e-260 900.2 562 82.0
Lalb_Chr18g0055621 Lupinus albus HOM05D005803 ORTHO05D008090 1.7e-257 892.5 561 81.1
TAR365G0996 Trochodendron aralioides HOM05D005803 ORTHO05D008090 3.7e-257 891.3 562 82.4
CAN.G223.20 Capsicum annuum HOM05D005803 ORTHO05D008090 4.9e-257 891.0 562 81.5
MD13G1171800 Malus domestica HOM05D005803 ORTHO05D008090 4.9e-257 891.0 562 81.7
VMungo0540G0998 Vigna mungo HOM05D005803 ORTHO05D008090 6.4e-257 890.6 561 81.5
Sed0014775 Sechium edule HOM05D005803 ORTHO05D008090 1.6e-255 885.9 561 81.1
Rhsim04G0218200 Rhododendron simsii HOM05D005803 ORTHO05D008090 2.0e-255 885.6 612 76.6
Psat1g187960 Pisum sativum HOM05D005803 ORTHO05D008090 5.9e-255 884.0 561 79.9
Glyma.15G096000 Glycine max HOM05D005803 ORTHO05D008090 1.9e-253 879.0 561 80.6
Glyma.13G216500 Glycine max HOM05D005803 ORTHO05D008090 3.3e-253 878.2 561 80.4
Phvul.006G162900 Phaseolus vulgaris HOM05D005803 ORTHO05D008090 4.3e-253 877.9 561 79.0
Sc19g0005000 Simmondsia chinensis HOM05D005803 ORTHO05D008090 9.5e-253 876.7 562 79.2
Eucgr.B01277 Eucalyptus grandis HOM05D005803 ORTHO05D008090 3.6e-252 874.8 562 79.4
DCAR_027096 Daucus carota HOM05D005803 ORTHO05D008090 6.2e-252 874.0 575 79.1
Lsat_1_v5_gn_5_69681 Lactuca sativa HOM05D005803 ORTHO05D008090 1.0e-251 873.2 561 79.7
CANSAT78G2259 Cannabis sativa HOM05D005803 ORTHO05D008090 1.8e-251 872.5 561 81.1
Duzib151G0664 Durio zibethinus HOM05D005803 ORTHO05D008090 1.5e-250 869.4 561 80.4
MSTRG.3937 Avicennia marina HOM05D005803 ORTHO05D008090 2.0e-250 869.0 565 78.4
Gohir.D10G168100 Gossypium hirsutum HOM05D005803 ORTHO05D008090 2.6e-250 868.6 562 80.4
Ca_00559_v3 Cicer arietinum L. HOM05D005803 ORTHO05D008090 3.4e-250 868.2 561 78.6
Aqoxy5G00678 Aquilegia oxysepala HOM05D005803 ORTHO05D008090 6.4e-249 864.0 539 81.3
FAN07G1352 Fragaria x ananassa HOM05D005803 ORTHO05D008090 6.4e-249 864.0 565 79.6
FAN12G0977 Fragaria x ananassa HOM05D005803 ORTHO05D008090 8.3e-249 863.6 557 80.3
FAN12G3070 Fragaria x ananassa HOM05D005803 ORTHO05D008090 6.0e-247 857.4 560 79.8
Atru.chr4.2785 Acer truncatum HOM05D005803 ORTHO05D008090 6.6e-246 854.0 515 83.5
Cpa.g.sc1214.2 Carica papaya HOM05D005803 ORTHO05D008090 2.5e-245 852.0 562 79.0
arahy.Tifrunner.gnm1.ann1.7QB25Q Arachis hypogaea HOM05D005803 ORTHO05D008090 2.8e-244 848.6 561 77.0
arahy.Tifrunner.gnm1.ann1.FSUI8I Arachis hypogaea HOM05D005803 ORTHO05D008090 2.8e-244 848.6 561 77.0
HanXRQChr13g0410111 Helianthus annuus HOM05D005803 ORTHO05D008090 3.6e-244 848.2 561 77.9
Cc03_g02160 Coffea canephora HOM05D005803 ORTHO05D008090 1.4e-243 846.3 560 78.6
THA.LOC104820247 Tarenaya hassleriana HOM05D005803 ORTHO05D008090 1.8e-243 845.9 562 77.9
EL10Ac3g06553 Beta vulgaris HOM05D005803 ORTHO05D008090 9.8e-242 840.1 562 76.5
Migut.G00189 Erythranthe guttata HOM05D005803 ORTHO05D008090 1.4e-240 836.3 566 76.0
FAN22G2255 Fragaria x ananassa HOM05D005803 ORTHO05D008090 1.6e-239 832.8 546 80.0
Lj6C671G13 Lonicera japonica HOM05D005803 ORTHO05D008090 5.1e-238 827.8 514 81.5
FvH4_4g17530 Fragaria vesca HOM05D005803 ORTHO05D008090 2.5e-237 825.5 513 81.5
Nitab4.5_0000644g0090 Nicotiana tabacum HOM05D005803 ORTHO05D008090 2.5e-237 825.5 576 76.6
MELO3C021349.2 Cucumis melo HOM05D005803 ORTHO05D008090 4.3e-237 824.7 648 69.1
HPP92_015179 Vanilla planifolia HOM05D005803 ORTHO05D008090 6.2e-236 820.8 561 75.9
ATR0706G085 Amborella trichopoda HOM05D005803 ORTHO05D008090 6.0e-231 804.3 562 73.0
PSO832G0201 Papaver somniferum HOM05D005803 ORTHO05D008090 1.7e-230 802.7 562 73.7
Medtr2g019850 Medicago truncatula HOM05D005803 ORTHO05D008090 1.5e-229 799.7 561 74.0
PSO210G1989 Papaver somniferum HOM05D005803 ORTHO05D008090 5.6e-229 797.7 562 73.3
Aa31LG5G20510 Aethionema arabicum HOM05D005803 ORTHO05D008090 1.6e-228 796.2 576 72.7
Ah.13g074480 Amaranthus hybridus HOM05D005803 ORTHO05D008090 1.6e-228 796.2 544 76.1
Carub.0004s2114 Capsella rubella HOM05D005803 ORTHO05D008090 1.6e-228 796.2 562 74.6
AT2G39090 Arabidopsis thaliana HOM05D005803 ORTHO05D008090 2.1e-228 795.8 562 74.2
Sp4g21440 Schrenkiella parvula HOM05D005803 ORTHO05D008090 2.8e-228 795.4 562 74.2
BcaB02g09144 Brassica carinata HOM05D005803 ORTHO05D008090 8.1e-228 793.9 562 73.8
A05p07190 Brassica napus HOM05D005803 ORTHO05D008090 2.6e-226 788.9 563 73.5
BraA05t19684Z Brassica rapa HOM05D005803 ORTHO05D008090 2.6e-226 788.9 563 73.5
MBI19_g01944_MAGBIO Magnolia biondii HOM05D005803 ORTHO05D008090 2.6e-226 788.9 532 76.3
CARHR133850 Cardamine hirsuta HOM05D005803 ORTHO05D008090 4.9e-225 784.6 562 72.6
BcaC02g12039 Brassica carinata HOM05D005803 ORTHO05D008090 2.1e-223 779.2 562 72.8
Thhalv10017916m.g Eutrema salsugineum HOM05D005803 ORTHO05D008090 1.0e-222 776.9 533 75.8
C04p08600 Brassica napus HOM05D005803 ORTHO05D008090 5.1e-222 774.6 563 72.6
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 5.1e-222 774.6 562 72.6
vmacro22476 Vaccinium macrocarpon HOM05D005803 ORTHO05D008090 1.9e-221 772.7 594 71.2
AL4G36390 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 2.8e-220 768.8 562 73.1
COL.COLO4_13910 Corchorus olitorius HOM05D005803 ORTHO05D008090 1.4e-219 766.5 512 76.2
SGA_v2.0_scaffold57G20231 Striga asiatica HOM05D005803 ORTHO05D008090 1.9e-208 729.6 476 78.2
Hma1.2p1_0698F.1_g205440 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 7.9e-199 697.6 393 90.1
unitig_26.g9058 Utricularia gibba HOM05D005803 ORTHO05D008090 1.4e-184 650.2 455 71.4
Os05g0149900 Oryza sativa ssp. japonica HOM05D005803 ORTHO05D008090 2.0e-181 639.8 433 74.1
Pp3c23_6980 Physcomitrium patens HOM05D005803 ORTHO05D008090 2.0e-178 629.8 562 59.8
Mapoly0073s0077 Marchantia polymorpha HOM05D005803 ORTHO05D008090 3.2e-176 622.5 563 58.8
AUR62042651 Chenopodium quinoa HOM05D005803 ORTHO05D008090 2.2e-169 599.7 554 59.7
SMO119G0467 Selaginella moellendorffii HOM05D005803 ORTHO05D008090 6.5e-169 598.2 569 56.6
AagrBONN_evm.TU.Sc2ySwM_228.1968 Anthoceros agrestis HOM05D005803 ORTHO05D008090 1.9e-168 596.7 563 56.7
CBR_g37168 Chara braunii HOM05D005803 ORTHO05D000048 9.4e-160 567.8 568 53.0
Nitab4.5_0000829g0230 Nicotiana tabacum HOM05D005803 ORTHO05D008090 1.6e-154 550.4 339 84.7
AUR62043505 Chenopodium quinoa HOM05D005803 ORTHO05D008090 1.5e-152 543.9 382 73.8
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 4.0e-142 509.2 524 58.2
TPR.G1478 Trifolium pratense HOM05D005803 ORTHO05D008090 9.5e-136 488.0 306 83.0
ECA240G2219 Erigeron canadensis HOM05D005803 ORTHO05D008090 2.1e-135 486.9 340 71.2
CDE06G0920 Ceratophyllum demersum HOM05D005803 ORTHO05D008090 2.3e-134 483.4 349 73.9
Zm00001eb418180 Zea mays HOM05D005803 ORTHO05D008090 2.0e-125 453.8 356 63.2
TPR.G35525 Trifolium pratense HOM05D005803 ORTHO05D008090 2.1e-111 407.1 260 76.5
MCO16G459 Micromonas commoda HOM05D005803 ORTHO05D008090 4.8e-87 326.2 542 38.6
Oeu029260.1 Olea europaea HOM05D005803 ORTHO05D008090 5.3e-78 296.2 208 76.4
Solyc01g067490.4 Solanum lycopersicum HOM05D005803 ORTHO05D008090 1.0e-76 292.0 198 75.3
Oeu032270.1 Olea europaea HOM05D005803 ORTHO05D008090 3.0e-65 253.8 144 83.3
ECA240G4135 Erigeron canadensis HOM05D005803 ORTHO05D008090 6.7e-65 252.7 200 69.5
SEGI_31260 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 1.2e-58 231.9 174 62.1
Hma1.2p1_2251F.1_g318140 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 1.0e-57 228.8 130 86.2
TPR.G29244 Trifolium pratense HOM05D005803 ORTHO05D008090 6.1e-50 203.0 161 67.1
TPR.G29241 Trifolium pratense HOM05D005803 ORTHO05D008090 1.3e-36 158.7 90 78.9
BcaC07g41552 Brassica carinata HOM05D000238 ORTHO05D020090 5.2e-33 146.7 180 48.3
BcaC09g48072 Brassica carinata HOM05D005803 ORTHO05D020090 1.7e-31 141.7 178 47.2
C06p17250 Brassica napus HOM05D005803 ORTHO05D020090 6.3e-31 139.8 157 51.6
BolC6t36924H Brassica oleracea HOM05D005803 ORTHO05D020090 6.3e-31 139.8 157 51.6
Hma1.2p1_0055F.1_g031500 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 1.1e-30 139.0 90 76.7
AL92U10050 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 1.3e-28 132.1 131 59.5
C04p44010 Brassica napus HOM05D005803 ORTHO05D020090 1.2e-26 125.6 167 46.1
Hma1.2p1_2251F.1_g318130 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 1.8e-25 121.7 129 52.7
SEGI_25333 Sequoiadendron giganteum HOM05D005803 ORTHO05D020090 2.9e-23 114.4 77 71.4
BcaC08g44302 Brassica carinata HOM05D005803 ORTHO05D020090 7.8e-21 106.3 58 87.9
Atru.chr4.2782 Acer truncatum HOM05D005803 ORTHO05D008090 4.3e-19 100.5 87 64.4
Hma1.2p1_1012F.1_g247600 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 8.0e-18 96.3 90 60.0
SEGI_29512 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 2.9e-15 87.8 81 58.0


User provided reference genes

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