Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017782001 Vitis vinifera HOM05D007775 ORTHO05D009858 1.1e-181 639.8 309 100.0
Cfa015361 Carpinus fangiana HOM05D007775 ORTHO05D009858 7.4e-90 334.7 266 63.2
Dinv38311 Davidia involucrata HOM05D007775 ORTHO05D009858 2.8e-89 332.8 263 62.4
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 1.6e-84 317.0 264 59.8
TAR362G1316 Trochodendron aralioides HOM05D007775 ORTHO05D009858 7.4e-82 308.1 274 56.2
Ciclev10005542m.g Citrus clementina HOM05D007775 ORTHO05D009858 4.8e-81 305.4 267 56.6
Thecc.04G279800 Theobroma cacao HOM05D007775 ORTHO05D009858 4.1e-80 302.4 263 57.0
QL06p007731 Quercus lobata HOM05D007775 ORTHO05D009858 6.9e-80 301.6 269 58.7
Prupe.1G140100 Prunus persica HOM05D007775 ORTHO05D009858 8.5e-78 294.7 265 56.6
Rhsim04G0218300 Rhododendron simsii HOM05D007775 ORTHO05D009858 8.5e-78 294.7 264 59.1
THA.LOC104820248 Tarenaya hassleriana HOM05D007775 ORTHO05D009858 2.5e-77 293.1 263 55.5
Atru.chr4.2786 Acer truncatum HOM05D007775 ORTHO05D009858 4.2e-77 292.4 253 57.3
Manes.15G015200 Manihot esculenta HOM05D007775 ORTHO05D009858 9.4e-77 291.2 240 61.7
COL.COLO4_13909 Corchorus olitorius HOM05D007775 ORTHO05D009858 1.6e-76 290.4 263 54.4
TWI09G0118 Tripterygium wilfordii HOM05D007775 ORTHO05D009858 1.6e-76 290.4 266 56.8
RcHm_v2.0_Chr4g0421471 Rosa chinensis HOM05D007775 ORTHO05D009858 7.9e-76 288.1 261 55.2
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 1.0e-75 287.7 262 57.3
Potri.008G215200 Populus trichocarpa HOM05D007775 ORTHO05D009858 6.7e-75 285.0 268 57.1
FAN07G2931 Fragaria x ananassa HOM05D007775 ORTHO05D009858 5.7e-74 282.0 258 55.4
Actinidia40242 Actinidia chinensis HOM05D007775 ORTHO05D009858 7.4e-74 281.6 263 55.5
MD13G1171700 Malus domestica HOM05D007775 ORTHO05D009858 7.4e-74 281.6 259 56.4
MELO3C021348.2 Cucumis melo HOM05D007775 ORTHO05D009858 1.7e-73 280.4 263 55.1
Sopen06g019650 Solanum pennellii HOM05D007775 ORTHO05D009858 2.2e-73 280.0 269 54.3
Cc03_g02150 Coffea canephora HOM05D007775 ORTHO05D009858 4.8e-73 278.9 266 54.9
ClCG06G005300 Citrullus lanatus HOM05D007775 ORTHO05D009858 8.2e-73 278.1 263 54.8
FvH4_4g17570 Fragaria vesca HOM05D007775 ORTHO05D009858 8.2e-73 278.1 259 54.4
Solyc06g054580.4 Solanum lycopersicum HOM05D007775 ORTHO05D009858 8.2e-73 278.1 269 53.9
Gohir.D10G168200 Gossypium hirsutum HOM05D007775 ORTHO05D009858 1.4e-72 277.3 268 53.0
Sabra08G0155600 Salix brachista HOM05D007775 ORTHO05D009858 1.4e-72 277.3 272 55.9
Eucgr.B01278 Eucalyptus grandis HOM05D007775 ORTHO05D009858 2.4e-72 276.6 264 55.7
Gorai.011G187800 Gossypium raimondii HOM05D007775 ORTHO05D009858 7.0e-72 275.0 271 52.0
CsaV3_6G017340 Cucumis sativus L. HOM05D007775 ORTHO05D009858 9.1e-72 274.6 263 53.6
Duzib151G1205 Durio zibethinus HOM05D007775 ORTHO05D009858 5.9e-71 271.9 244 57.8
PGSC0003DMG400030783 Solanum tuberosum HOM05D007775 ORTHO05D009858 1.7e-70 270.4 266 53.8
MBI19_g01943_MAGBIO Magnolia biondii HOM05D007775 ORTHO05D009858 2.5e-69 266.5 277 53.1
Lsat_1_v5_gn_5_52881 Lactuca sativa HOM05D007775 ORTHO05D009858 1.6e-68 263.8 266 52.3
Lj6A671T60 Lonicera japonica HOM05D007775 ORTHO05D009858 8.0e-68 261.5 254 54.7
Nn3g16301 Nelumbo nucifera HOM05D007775 ORTHO05D009858 1.8e-67 260.4 261 52.1
Cpa.g.sc197.12 Carica papaya HOM05D007775 ORTHO05D009858 4.0e-67 259.2 243 55.6
AT2G39100 Arabidopsis thaliana HOM05D007775 ORTHO05D009858 5.2e-67 258.8 262 50.4
Aa31LG5G20500 Aethionema arabicum HOM05D007775 ORTHO05D009858 6.7e-67 258.5 267 48.3
Sed0017003 Sechium edule HOM05D007775 ORTHO05D009858 7.5e-66 255.0 254 52.8
Ah.13g074550 Amaranthus hybridus HOM05D007775 ORTHO05D009858 2.8e-65 253.1 261 52.1
CAN.G256.16 Capsicum annuum HOM05D007775 ORTHO05D009858 8.2e-65 251.5 269 52.0
HanXRQChr03g0080871 Helianthus annuus HOM05D007775 ORTHO05D009858 1.1e-64 251.1 268 50.7
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 1.8e-64 250.4 253 52.6
FAN12G2546 Fragaria x ananassa HOM05D007775 ORTHO05D009858 2.0e-63 246.9 240 52.9
Gohir.A10G161700 Gossypium hirsutum HOM05D007775 ORTHO05D009858 7.7e-63 245.0 254 51.2
CARHR133870 Cardamine hirsuta HOM05D007775 ORTHO05D009858 1.0e-62 244.6 265 46.8
Sp4g21450 Schrenkiella parvula HOM05D007775 ORTHO05D009858 1.7e-62 243.8 263 47.5
Nitab4.5_0001459g0060 Nicotiana tabacum HOM05D007775 ORTHO05D009858 2.9e-62 243.0 240 55.4
BraA04t18439Z Brassica rapa HOM05D007775 ORTHO05D009858 3.8e-62 242.7 264 48.1
Carub.0004s2115 Capsella rubella HOM05D007775 ORTHO05D009858 3.8e-62 242.7 261 47.9
Thhalv10017000m.g Eutrema salsugineum HOM05D007775 ORTHO05D009858 5.0e-62 242.3 263 46.8
C04p67030 Brassica napus HOM05D007775 ORTHO05D009858 6.5e-62 241.9 265 48.3
CANSAT78G0244 Cannabis sativa HOM05D007775 ORTHO05D009858 6.5e-62 241.9 241 51.9
Nitab4.5_0002148g0040 Nicotiana tabacum HOM05D007775 ORTHO05D009858 6.5e-62 241.9 244 54.5
BolC4t28205H Brassica oleracea HOM05D007775 ORTHO05D009858 1.9e-61 240.4 267 48.3
ECA240G4119 Erigeron canadensis HOM05D007775 ORTHO05D009858 2.3e-59 233.4 245 51.4
DCAR_024553 Daucus carota HOM05D007775 ORTHO05D009858 4.1e-56 222.6 215 53.5
arahy.Tifrunner.gnm1.ann1.J8QG6N Arachis hypogaea HOM05D007775 ORTHO05D009858 4.5e-55 219.2 276 47.1
Peaxi162Scf00033g01324 Petunia axillaris HOM05D007775 ORTHO05D009858 5.0e-54 215.7 259 46.7
arahy.Tifrunner.gnm1.ann1.KJPE0P Arachis hypogaea HOM05D007775 ORTHO05D009858 1.9e-53 213.8 290 44.1
PSO210G6602 Papaver somniferum HOM05D007775 ORTHO05D009858 1.9e-53 213.8 280 43.9
Lalb_Chr13g0303771 Lupinus albus HOM05D007775 ORTHO05D009858 7.2e-53 211.8 281 44.8
A04p29770 Brassica napus HOM05D007775 ORTHO05D009858 2.0e-50 203.8 216 49.1
Sc06g0007440 Simmondsia chinensis HOM05D007775 ORTHO05D009858 1.2e-47 194.5 239 46.0
Aqoxy2G03074 Aquilegia oxysepala HOM05D007775 ORTHO05D009858 5.9e-47 192.2 216 48.6
AL4G36400 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 1.9e-45 187.2 206 46.1
BcaC02g12905 Brassica carinata HOM05D007775 ORTHO05D009858 4.0e-43 179.5 237 42.6
FAN12G2785 Fragaria x ananassa HOM05D007775 ORTHO05D009858 4.9e-41 172.6 168 52.4
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 2.3e-35 153.7 151 53.6
Pp3c21_11960 Physcomitrium patens HOM05D007775 ORTHO05D009858 5.8e-34 149.1 308 31.5
AL92U10060 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 1.7e-33 147.5 179 43.0
ATR0706G202 Amborella trichopoda HOM05D007775 ORTHO05D009858 6.4e-33 145.6 209 39.7
SMO147G0036 Selaginella moellendorffii HOM05D007775 ORTHO05D009858 2.5e-29 133.7 319 28.8
QL06p007898 Quercus lobata HOM05D007775 ORTHO05D009858 4.0e-27 126.3 118 56.8
vmacro08108 Vaccinium macrocarpon HOM05D007775 ORTHO05D009858 4.1e-24 116.3 90 60.0
CSS0050081 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 5.6e-21 105.9 83 62.7
CSS0035717 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 2.1e-20 104.0 83 60.2
SEGI_15450 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 2.8e-20 103.6 126 38.9
CSS0036115 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 6.8e-19 99.0 83 59.0
SEGI_08073 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 1.3e-17 94.7 142 35.9
Prupe.8G004900 Prunus persica HOM05D007775 ORTHO05D009858 1.7e-17 94.4 73 58.9
MSTRG.10078 Avicennia marina HOM05D007775 ORTHO05D009858 1.4e-16 91.3 83 54.2
Ciclev10002145m.g Citrus clementina HOM05D006625 ORTHO05D008060 6.4e-09 65.9 271 24.4
COL.COLO4_10908 Corchorus olitorius HOM05D007775 ORTHO05D009858 1.4e-08 64.7 58 50.0
ECA238G3785 Erigeron canadensis HOM05D006625 ORTHO05D008060 2.7e-07 60.5 265 23.4
Hund07059 Selenicereus undatus HOM05D006625 ORTHO05D008060 4.6e-07 59.7 271 23.6
CsaV3_2G005130 Cucumis sativus L. HOM05D006625 ORTHO05D008060 6.0e-07 59.3 264 23.9
HanXRQChr10g0295051 Helianthus annuus HOM05D006625 ORTHO05D008060 6.0e-07 59.3 265 23.4
Cpa.g.sc48.33 Carica papaya HOM05D006625 ORTHO05D008060 3.0e-06 57.0 264 24.6
Lj5g0018133 Lotus japonicus HOM05D006625 ORTHO05D008060 5.1e-06 56.2 264 24.2
QL03p005837 Quercus lobata HOM05D006625 ORTHO05D008060 6.6e-06 55.8 266 22.6


User provided reference genes

Program Settings