Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 8.1e-72 273.9 161 100.0
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 2.5e-41 172.6 165 67.9
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 2.8e-40 169.1 169 68.6
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 3.7e-40 168.7 169 67.5
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 8.2e-40 167.5 157 67.5
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 3.1e-39 165.6 157 66.9
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 4.0e-39 165.2 158 68.4
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 6.9e-39 164.5 162 70.4
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.2e-38 163.7 160 69.4
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 4.5e-38 161.8 163 68.7
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 5.8e-38 161.4 162 69.1
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 1.7e-37 159.8 160 65.0
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 2.2e-37 159.5 121 71.9
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 1.4e-36 156.8 153 66.7
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 1.9e-36 156.4 167 64.1
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 4.2e-36 155.2 117 70.9
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 5.5e-36 154.8 119 69.7
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 5.5e-36 154.8 122 68.9
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 9.3e-36 154.1 164 59.1
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 1.6e-35 153.3 165 64.8
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 1.6e-35 153.3 110 73.6
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 2.1e-35 152.9 156 66.7
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 2.7e-35 152.5 157 63.7
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 3.5e-35 152.1 163 66.3
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 4.6e-35 151.8 124 65.3
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 7.9e-35 151.0 165 65.5
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.0e-34 150.6 163 65.6
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 1.3e-34 150.2 111 72.1
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.3e-34 150.2 163 65.6
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 1.3e-34 150.2 168 66.7
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 1.8e-34 149.8 162 67.9
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 3.0e-34 149.1 111 72.1
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 3.9e-34 148.7 163 65.0
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 3.9e-34 148.7 162 64.8
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 3.9e-34 148.7 159 61.6
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 3.9e-34 148.7 152 63.8
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 5.1e-34 148.3 110 70.0
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 6.7e-34 147.9 159 63.5
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 6.7e-34 147.9 159 61.6
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 3.3e-33 145.6 155 62.6
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 4.3e-33 145.2 112 68.8
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 4.3e-33 145.2 126 69.0
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 5.7e-33 144.8 162 64.2
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 5.7e-33 144.8 164 63.4
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 1.3e-32 143.7 161 63.4
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 1.3e-32 143.7 118 65.3
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 1.6e-32 143.3 115 68.7
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 1.6e-32 143.3 162 63.0
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 1.6e-32 143.3 116 68.1
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 2.2e-32 142.9 158 67.1
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 2.2e-32 142.9 114 68.4
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 2.8e-32 142.5 118 68.6
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 2.8e-32 142.5 157 64.3
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 3.7e-32 142.1 168 61.9
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 4.8e-32 141.7 192 57.3
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 6.3e-32 141.4 165 63.0
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 6.3e-32 141.4 115 67.0
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 8.2e-32 141.0 157 65.0
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 1.1e-31 140.6 163 64.4
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 1.1e-31 140.6 165 62.4
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 1.1e-31 140.6 165 62.4
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 1.1e-31 140.6 113 67.3
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 1.4e-31 140.2 88 84.1
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 2.4e-31 139.4 107 67.3
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 2.4e-31 139.4 160 63.8
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 3.1e-31 139.0 164 61.6
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 4.1e-31 138.7 160 62.5
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 5.3e-31 138.3 103 70.9
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 6.9e-31 137.9 106 68.9
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 6.9e-31 137.9 112 67.0
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 1.2e-30 137.1 116 61.2
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.2e-30 137.1 114 67.5
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 2.0e-30 136.3 109 67.0
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 2.0e-30 136.3 109 67.0
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 3.4e-30 135.6 115 67.0
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 3.4e-30 135.6 115 67.0
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 3.4e-30 135.6 115 67.0
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 3.4e-30 135.6 114 64.9
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 4.5e-30 135.2 109 68.8
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 5.9e-30 134.8 110 68.2
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 5.9e-30 134.8 115 67.0
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.3e-29 133.7 115 66.1
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 2.2e-29 132.9 160 63.1
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 2.2e-29 132.9 119 62.2
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 2.2e-29 132.9 113 61.9
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 2.2e-29 132.9 113 61.9
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 2.9e-29 132.5 132 58.3
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 3.8e-29 132.1 86 81.4
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 1.1e-28 130.6 118 61.9
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 1.9e-28 129.8 155 62.6
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 3.2e-28 129.0 112 65.2
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 4.2e-28 128.6 156 62.2
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 7.2e-28 127.9 115 64.3
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 9.3e-28 127.5 115 64.3
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 9.3e-28 127.5 85 77.6
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 2.7e-27 125.9 103 68.9
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 2.3e-26 122.9 169 58.0
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 2.3e-26 122.9 159 57.2
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 1.9e-25 119.8 105 64.8
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 2.5e-25 119.4 167 56.9
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 9.7e-25 117.5 140 52.9
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 3.7e-24 115.5 118 51.7
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 6.3e-24 114.8 90 66.7
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 2.4e-23 112.8 119 54.6
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 9.1e-23 110.9 168 54.8
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 1.1e-20 104.0 126 53.2
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 4.2e-20 102.1 86 64.0
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 2.1e-19 99.8 92 65.2
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 3.6e-19 99.0 83 67.5
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 2.0e-17 93.2 54 83.3
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 4.1e-15 85.5 83 56.6
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 9.1e-15 84.3 162 46.3
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.5e-14 83.6 162 40.7
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 6.5e-13 78.2 89 52.8
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 1.1e-12 77.4 85 50.6
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 6.1e-11 71.6 143 47.6
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 1.1e-09 67.4 152 44.1
Nitab4.5_0000784g0080 Nicotiana tabacum HOM05D006881 ORTHO05D008423 1.2e-06 57.4 158 43.7


User provided reference genes

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