Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017733001 Vitis vinifera HOM05D006926 ORTHO05D008863 5.6e-55 219.9 191 100.0
Carub.0003s0644 Capsella rubella HOM05D006926 ORTHO05D008863 1.2e-28 132.5 221 56.6
AL3G18090 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.2e-20 105.9 160 40.6
Actinidia40273 Actinidia chinensis HOM05D006926 ORTHO05D008863 1.6e-17 95.5 51 92.2
Lj9C380T3 Lonicera japonica HOM05D006926 ORTHO05D008863 1.6e-17 95.5 51 92.2
QL06p009008 Quercus lobata HOM05D006926 ORTHO05D008863 2.1e-17 95.1 49 93.9
vmacro08158 Vaccinium macrocarpon HOM05D006926 ORTHO05D008863 2.7e-17 94.7 51 92.2
CSS0048032 Camellia sinensis var. sinensis HOM05D006926 ORTHO05D008863 4.7e-17 94.0 48 95.8
Atru.chr4.2848 Acer truncatum HOM05D006926 ORTHO05D008863 6.1e-17 93.6 83 59.0
Sopen01g030780 Solanum pennellii HOM05D006926 ORTHO05D008863 6.1e-17 93.6 87 55.2
TAR365G0845 Trochodendron aralioides HOM05D006926 ORTHO05D008863 6.1e-17 93.6 50 92.0
A03p34960 Brassica napus HOM05D006926 ORTHO05D008863 7.9e-17 93.2 105 42.9
BraA03t12676Z Brassica rapa HOM05D006926 ORTHO05D008863 7.9e-17 93.2 105 42.9
Manes.03G195800 Manihot esculenta HOM05D006926 ORTHO05D008863 7.9e-17 93.2 83 57.8
C03p42540 Brassica napus HOM05D006926 ORTHO05D008863 1.0e-16 92.8 105 42.9
CiPaw.01G148200 Carya illinoinensis HOM05D006926 ORTHO05D008863 1.4e-16 92.4 51 88.2
Haze_01195 Corylus avellana HOM05D006926 ORTHO05D008863 2.3e-16 91.7 48 91.7
Nitab4.5_0000059g0440 Nicotiana tabacum HOM05D006926 ORTHO05D008863 2.3e-16 91.7 51 86.3
Nitab4.5_0005852g0010 Nicotiana tabacum HOM05D006926 ORTHO05D008863 2.3e-16 91.7 51 86.3
Cpa.g.sc16.177 Carica papaya HOM05D006926 ORTHO05D008863 3.0e-16 91.3 83 57.8
DCAR_006643 Daucus carota HOM05D006926 ORTHO05D008863 3.0e-16 91.3 50 90.0
Gohir.A09G238600 Gossypium hirsutum HOM05D006926 ORTHO05D008863 3.0e-16 91.3 48 95.8
Cfa015391 Carpinus fangiana HOM05D006926 ORTHO05D008863 3.9e-16 90.9 47 93.6
Rhsim04G0222900 Rhododendron simsii HOM05D006926 ORTHO05D008863 3.9e-16 90.9 49 87.8
CAN.G185.37 Capsicum annuum HOM05D006926 ORTHO05D008863 8.8e-16 89.7 50 86.0
Duzib151G0724 Durio zibethinus HOM05D006926 ORTHO05D008863 8.8e-16 89.7 53 81.1
RcHm_v2.0_Chr4g0422371 Rosa chinensis HOM05D006926 ORTHO05D008863 8.8e-16 89.7 50 90.0
PGSC0003DMG400006295 Solanum tuberosum HOM05D006926 ORTHO05D008863 8.8e-16 89.7 50 86.0
Cc00_g07570 Coffea canephora HOM05D006926 ORTHO05D008863 1.1e-15 89.4 51 80.4
Peaxi162Scf01123g00213 Petunia axillaris HOM05D006926 ORTHO05D008863 1.1e-15 89.4 83 56.6
Prupe.1G135500 Prunus persica HOM05D006926 ORTHO05D008863 1.1e-15 89.4 47 93.6
TWI09G0560 Tripterygium wilfordii HOM05D006926 ORTHO05D008863 1.1e-15 89.4 83 55.4
CSS0040550 Camellia sinensis var. sinensis HOM05D006926 ORTHO05D008863 1.5e-15 89.0 83 54.2
Gohir.D09G239500 Gossypium hirsutum HOM05D006926 ORTHO05D008863 1.5e-15 89.0 53 83.0
Gorai.006G262300 Gossypium raimondii HOM05D006926 ORTHO05D008863 1.5e-15 89.0 53 83.0
Ciclev10007037m.g Citrus clementina HOM05D006926 ORTHO05D008863 2.0e-15 88.6 50 88.0
COL.COLO4_13863 Corchorus olitorius HOM05D006926 ORTHO05D008863 2.0e-15 88.6 46 93.5
FvH4_4g18230 Fragaria vesca HOM05D006926 ORTHO05D008863 2.6e-15 88.2 50 88.0
FAN12G2558 Fragaria x ananassa HOM05D006926 ORTHO05D008863 2.6e-15 88.2 50 88.0
FAN12G4333 Fragaria x ananassa HOM05D006926 ORTHO05D008863 2.6e-15 88.2 50 88.0
Solyc01g080720.4 Solanum lycopersicum HOM05D006926 ORTHO05D008863 3.3e-15 87.8 83 54.2
ECA233G5048 Erigeron canadensis HOM05D006926 ORTHO05D008863 4.4e-15 87.4 51 82.4
Thecc.04G285300 Theobroma cacao HOM05D006926 ORTHO05D008863 4.4e-15 87.4 53 79.2
Phvul.008G277600 Phaseolus vulgaris HOM05D006926 ORTHO05D008863 5.7e-15 87.0 48 85.4
Sabra10G0009000 Salix brachista HOM05D006926 ORTHO05D008863 5.7e-15 87.0 46 91.3
Eucgr.C02193 Eucalyptus grandis HOM05D006926 ORTHO05D008863 9.7e-15 86.3 51 86.3
MD08G1066700 Malus domestica HOM05D006926 ORTHO05D008863 9.7e-15 86.3 46 91.3
Lalb_Chr10g0107371 Lupinus albus HOM05D006926 ORTHO05D008863 1.3e-14 85.9 48 85.4
Ca_06384_v3 Cicer arietinum L. HOM05D006926 ORTHO05D008863 1.7e-14 85.5 48 83.3
Ca_29965_v3 Cicer arietinum L. HOM05D006926 ORTHO05D008863 1.7e-14 85.5 48 83.3
HanXRQChr05g0150001 Helianthus annuus HOM05D006926 ORTHO05D008863 1.7e-14 85.5 83 54.2
Oeu029705.1 Olea europaea HOM05D006926 ORTHO05D008863 1.7e-14 85.5 105 42.9
Potri.010G014100 Populus trichocarpa HOM05D006926 ORTHO05D008863 1.7e-14 85.5 47 89.4
MSTRG.10097 Avicennia marina HOM05D006926 ORTHO05D008863 2.8e-14 84.7 105 45.7
CANSAT78G1021 Cannabis sativa HOM05D006926 ORTHO05D008863 2.8e-14 84.7 83 51.8
FAN17G0573 Fragaria x ananassa HOM05D006926 ORTHO05D008863 2.8e-14 84.7 83 53.0
Medtr5g095130 Medicago truncatula HOM05D006926 ORTHO05D008863 2.8e-14 84.7 83 54.2
Dinv26449 Davidia involucrata HOM05D006926 ORTHO05D008863 4.8e-14 84.0 83 55.4
Migut.G00155 Erythranthe guttata HOM05D006926 ORTHO05D008863 4.8e-14 84.0 47 87.2
VMungo0647G0525 Vigna mungo HOM05D006926 ORTHO05D008863 4.8e-14 84.0 48 83.3
Aa31LG5G17490 Aethionema arabicum HOM05D006926 ORTHO05D008863 6.3e-14 83.6 53 73.6
Psat2g008440 Pisum sativum HOM05D006926 ORTHO05D008863 6.3e-14 83.6 83 54.2
ClCG05G006130 Citrullus lanatus HOM05D006926 ORTHO05D008863 8.2e-14 83.2 106 45.3
Glyma.02G298900 Glycine max HOM05D006926 ORTHO05D008863 8.2e-14 83.2 47 85.1
PGR031G3585 Punica granatum HOM05D006926 ORTHO05D008863 8.2e-14 83.2 58 63.8
AL159U10010 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.1e-13 82.8 53 71.7
AL3G18040 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.1e-13 82.8 53 71.7
AL3G18070 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.1e-13 82.8 53 71.7
SHI00269 Sapria himalayana HOM05D006926 ORTHO05D008863 1.4e-13 82.4 105 41.9
Ah.00g000960 Amaranthus hybridus HOM05D006926 ORTHO05D008863 1.8e-13 82.0 83 51.8
Thhalv10020026m.g Eutrema salsugineum HOM05D006926 ORTHO05D008863 1.8e-13 82.0 51 78.4
LjContig00081g0009495 Lotus japonicus HOM05D006926 ORTHO05D008863 1.8e-13 82.0 47 83.0
Sp3g05870 Schrenkiella parvula HOM05D006926 ORTHO05D008863 1.8e-13 82.0 51 78.4
CARHR081530 Cardamine hirsuta HOM05D006926 ORTHO05D008863 2.4e-13 81.6 53 69.8
THA.LOC104827343 Tarenaya hassleriana HOM05D006926 ORTHO05D008863 2.4e-13 81.6 53 75.5
Nn2g14325 Nelumbo nucifera HOM05D006926 ORTHO05D008863 3.1e-13 81.3 83 51.8
Nn6g34671 Nelumbo nucifera HOM05D006926 ORTHO05D008863 3.1e-13 81.3 82 54.9
Sed0000576 Sechium edule HOM05D006926 ORTHO05D008863 3.1e-13 81.3 53 75.5
THA.LOC104818923 Tarenaya hassleriana HOM05D006926 ORTHO05D008863 3.1e-13 81.3 83 51.8
TPR.G14145 Trifolium pratense HOM05D006926 ORTHO05D008863 3.1e-13 81.3 47 80.9
AT3G06920 Arabidopsis thaliana HOM05D006926 ORTHO05D008863 4.1e-13 80.9 53 69.8
Lsat_1_v5_gn_8_31281 Lactuca sativa HOM05D006926 ORTHO05D008863 4.1e-13 80.9 51 74.5
TAR365G0466 Trochodendron aralioides HOM05D006926 ORTHO05D008863 4.1e-13 80.9 83 54.2
CsaV3_3G014680 Cucumis sativus L. HOM05D006926 ORTHO05D008863 5.3e-13 80.5 45 82.2
EL10Ac1g01925 Beta vulgaris HOM05D006926 ORTHO05D008863 1.5e-12 79.0 83 50.6
SalBow1G7679 Salvia bowleyana HOM05D006926 ORTHO05D008863 1.5e-12 79.0 105 41.0
Cc01_g06580 Coffea canephora HOM05D006926 ORTHO05D008863 2.0e-12 78.6 83 51.8
Lalb_Chr17g0348851 Lupinus albus HOM05D006926 ORTHO05D008863 2.0e-12 78.6 48 77.1
TPR.G14143 Trifolium pratense HOM05D006926 ORTHO05D008863 2.0e-12 78.6 98 42.9
Hund12224 Selenicereus undatus HOM05D006926 ORTHO05D008863 2.6e-12 78.2 83 50.6
BolC3t16524H Brassica oleracea HOM05D006926 ORTHO05D008863 3.5e-12 77.8 53 66.0
Aqoxy5G00729 Aquilegia oxysepala HOM05D004412 ORTHO05D005316 5.9e-12 77.0 53 66.0
AUR62035127 Chenopodium quinoa HOM05D006926 ORTHO05D008863 1.0e-11 76.3 83 48.2
AUR62040613 Chenopodium quinoa HOM05D006926 ORTHO05D008863 1.0e-11 76.3 83 48.2
arahy.Tifrunner.gnm1.ann1.R7Y0VJ Arachis hypogaea HOM05D006926 ORTHO05D008863 3.8e-11 74.3 53 67.9
arahy.Tifrunner.gnm1.ann1.DI2NU4 Arachis hypogaea HOM05D006926 ORTHO05D008863 5.0e-11 73.9 53 67.9
MBI01_g30450_MAGBIO Magnolia biondii HOM05D006926 ORTHO05D008863 6.5e-11 73.6 53 69.8
Zm00001eb304410 Zea mays HOM05D006926 ORTHO05D008863 6.5e-11 73.6 49 71.4
Os07g0249100 Oryza sativa ssp. japonica HOM05D006926 ORTHO05D008863 1.9e-10 72.0 47 74.5
Sc10g0006430 Simmondsia chinensis HOM05D006926 ORTHO05D008863 9.4e-10 69.7 41 82.9
PSO302G0177 Papaver somniferum HOM05D006926 ORTHO05D008863 2.1e-09 68.6 42 81.0
CDE11G0294 Ceratophyllum demersum HOM05D006926 ORTHO05D008863 3.6e-09 67.8 52 65.4
Sed0021384 Sechium edule HOM05D006926 ORTHO05D008863 1.4e-08 65.9 46 67.4
ATR0796G196 Amborella trichopoda HOM05D006926 ORTHO05D008863 3.9e-08 64.3 46 67.4
CDE01G0787 Ceratophyllum demersum HOM05D006926 ORTHO05D008863 1.1e-07 62.8 83 42.2
SGA_v2.0_scaffold67G22630 Striga asiatica HOM05D006926 ORTHO05D008863 1.5e-07 62.4 35 80.0
Nn1g09562 Nelumbo nucifera HOM05D006926 ORTHO05D008863 2.6e-07 61.6 48 58.3


User provided reference genes

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