Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 1.3e-135 486.5 268 100.0
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 1.8e-92 343.2 255 74.9
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 9.3e-89 330.9 270 71.1
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 3.5e-88 328.9 270 70.7
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 8.7e-87 324.3 272 67.6
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 3.1e-84 315.8 270 66.7
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 1.7e-82 310.1 272 65.4
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 6.4e-82 308.1 267 66.7
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 4.6e-80 302.0 254 67.7
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 2.3e-79 299.7 265 67.2
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 2.3e-79 299.7 267 65.9
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 1.5e-78 297.0 252 69.4
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 1.9e-78 296.6 265 66.4
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 4.3e-78 295.4 257 67.7
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 6.2e-77 291.6 255 67.5
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 8.1e-77 291.2 270 67.4
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 1.4e-76 290.4 262 66.0
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 1.8e-76 290.0 266 64.7
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 5.3e-76 288.5 262 66.8
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 6.9e-76 288.1 260 63.1
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 5.8e-75 285.0 256 64.5
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 1.7e-74 283.5 249 67.5
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 1.7e-74 283.5 284 61.6
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 2.9e-74 282.7 273 62.6
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 6.4e-74 281.6 253 66.4
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 8.4e-74 281.2 251 65.7
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 2.5e-73 279.6 254 64.6
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 4.2e-73 278.9 279 61.6
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 5.5e-73 278.5 263 64.6
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.2e-72 277.3 268 61.2
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 1.6e-72 276.9 270 61.9
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 4.6e-72 275.4 278 61.5
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 4.6e-72 275.4 278 62.2
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 6.0e-72 275.0 278 61.2
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 7.9e-72 274.6 250 66.8
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 6.7e-71 271.6 265 59.6
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 1.1e-70 270.8 254 62.2
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 1.9e-70 270.0 352 51.4
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 3.3e-70 269.2 255 63.9
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 3.3e-70 269.2 288 59.4
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 3.3e-70 269.2 263 60.5
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 4.3e-70 268.9 325 54.5
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 5.6e-70 268.5 293 58.4
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 5.6e-70 268.5 243 63.4
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 7.4e-70 268.1 259 60.6
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 9.6e-70 267.7 293 58.4
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.6e-69 266.9 288 59.4
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 2.8e-69 266.2 293 58.7
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 2.8e-69 266.2 248 63.3
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 1.4e-68 263.8 252 63.5
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.8e-68 263.5 235 66.4
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 1.8e-68 263.5 249 64.7
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 4.0e-68 262.3 262 61.5
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 6.9e-68 261.5 316 53.8
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 6.9e-68 261.5 230 69.1
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 1.2e-67 260.8 250 63.6
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 2.6e-67 259.6 232 67.7
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 5.8e-67 258.5 252 62.3
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 5.8e-67 258.5 250 62.8
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 7.6e-67 258.1 266 57.9
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.0e-66 257.7 235 66.0
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 6.5e-66 255.0 226 65.9
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 8.4e-66 254.6 250 63.6
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 7.1e-65 251.5 345 50.1
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 1.2e-64 250.8 258 58.5
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 1.2e-64 250.8 256 60.9
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 4.6e-64 248.8 256 60.2
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 6.0e-64 248.4 250 61.6
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 7.9e-64 248.1 248 59.3
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 1.0e-63 247.7 268 59.0
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 7.4e-62 241.5 257 59.5
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 9.7e-62 241.1 187 74.9
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 1.6e-61 240.4 227 63.0
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 4.8e-61 238.8 306 53.3
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 4.8e-61 238.8 241 58.9
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 1.8e-60 236.9 262 56.1
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 4.1e-60 235.7 268 52.2
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 5.3e-60 235.3 255 57.3
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 5.9e-59 231.9 233 61.8
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 6.5e-58 228.4 228 58.8
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 1.4e-57 227.3 270 55.6
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 1.9e-57 226.9 262 54.6
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 2.5e-57 226.5 255 53.3
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 3.2e-57 226.1 250 59.2
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 4.6e-56 222.2 227 58.6
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 7.9e-56 221.5 242 54.1
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 7.9e-56 221.5 242 54.1
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 1.0e-55 221.1 242 54.1
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 3.0e-55 219.5 216 61.1
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 3.9e-55 219.2 240 53.8
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 3.9e-55 219.2 237 54.9
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 3.9e-55 219.2 240 53.8
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 8.8e-55 218.0 240 53.8
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 1.5e-54 217.2 178 73.0
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 1.5e-54 217.2 256 55.5
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 3.3e-54 216.1 240 52.9
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 7.4e-54 214.9 237 54.4
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 9.7e-54 214.5 239 53.6
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 3.7e-53 212.6 236 53.0
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 6.3e-53 211.8 240 52.9
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 1.4e-52 210.7 256 54.7
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 1.8e-52 210.3 233 53.2
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 2.4e-52 209.9 236 52.1
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 1.2e-51 207.6 264 50.0
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 1.3e-50 204.1 240 51.7
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 5.5e-49 198.7 242 52.1
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 1.6e-48 197.2 240 50.8
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 4.7e-48 195.7 240 51.2
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 4.7e-48 195.7 252 49.6
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 1.0e-47 194.5 256 48.4
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 7.2e-41 171.8 252 44.4
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 3.6e-40 169.5 124 73.4
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 5.7e-38 162.2 165 60.6
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 3.2e-33 146.4 127 66.9
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 3.2e-33 146.4 270 38.5
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 8.3e-29 131.7 125 63.2
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 2.7e-27 126.7 229 42.4
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 8.5e-26 121.7 231 39.4
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 3.2e-25 119.8 152 48.7
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 5.5e-25 119.0 260 32.3
GSVIVG01017610001 Vitis vinifera HOM05D005991 ORTHO05D007408 5.5e-25 119.0 134 59.7
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 9.4e-25 118.2 227 38.8
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 3.6e-24 116.3 124 53.2
GSVIVG01017622001 Vitis vinifera HOM05D005991 ORTHO05D007408 1.0e-18 98.2 70 78.6
GSVIVG01017621001 Vitis vinifera HOM05D005991 ORTHO05D007408 4.7e-16 89.4 100 59.0
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 4.4e-14 82.8 273 31.1
Sabra10G0116500 Salix brachista HOM05D005991 ORTHO05D007408 2.2e-13 80.5 105 53.3
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 6.6e-10 68.9 224 32.1


User provided reference genes

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