Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017504001 Vitis vinifera HOM05D002815 ORTHO05D003409 1.0e-14 82.0 37 100.0
GSVIVG01037049001 Vitis vinifera HOM05D002815 ORTHO05D003409 1.0e-14 82.0 37 100.0
GSVIVG01037922001 Vitis vinifera HOM05D002815 ORTHO05D003409 1.0e-14 82.0 37 100.0
GSVIVG01020238001 Vitis vinifera HOM05D002815 ORTHO05D003409 2.3e-14 80.9 37 97.3
GSVIVG01011309001 Vitis vinifera HOM05D002815 ORTHO05D003409 5.1e-14 79.7 37 97.3
GSVIVG01012458001 Vitis vinifera HOM05D002815 ORTHO05D003409 5.1e-14 79.7 37 97.3
GSVIVG01022216001 Vitis vinifera HOM05D002815 ORTHO05D003409 9.7e-13 75.5 37 91.9
CiPaw.03G135000 Carya illinoinensis HOM05D002815 ORTHO05D003409 6.3e-12 72.8 37 86.5
Duzib187G1281 Durio zibethinus HOM05D002815 ORTHO05D003409 6.3e-12 72.8 37 83.8
Ciclev10025987m.g Citrus clementina HOM05D002815 ORTHO05D003409 1.8e-11 71.2 37 83.8
Haze_25031 Corylus avellana HOM05D002815 ORTHO05D003409 1.8e-11 71.2 37 83.8
Gohir.A12G092900 Gossypium hirsutum HOM05D002815 ORTHO05D003409 1.8e-11 71.2 37 81.1
Hma1.2p1_0375F.1_g138590 Hydrangea macrophylla HOM05D002815 ORTHO05D003409 1.8e-11 71.2 37 83.8
TAR625G0199 Trochodendron aralioides HOM05D002815 ORTHO05D003409 5.3e-11 69.7 37 83.8
Actinidia28889 Actinidia chinensis HOM05D002815 ORTHO05D003409 9.1e-11 68.9 37 83.8
ClCG01G019280 Citrullus lanatus HOM05D002815 ORTHO05D003409 9.1e-11 68.9 37 83.8
PSO210G7429 Papaver somniferum HOM05D002815 ORTHO05D003409 9.1e-11 68.9 37 81.1
PSO447G0121 Papaver somniferum HOM05D002815 ORTHO05D003409 9.1e-11 68.9 37 81.1
CiPaw.04G092700 Carya illinoinensis HOM05D002815 ORTHO05D003409 1.2e-10 68.6 37 78.4
QL06p032363 Quercus lobata HOM05D002815 ORTHO05D003409 1.2e-10 68.6 36 77.8
Glyma.04G220100 Glycine max HOM05D002815 ORTHO05D003409 1.5e-10 68.2 37 78.4
Lalb_Chr07g0184831 Lupinus albus HOM05D002815 ORTHO05D003409 1.5e-10 68.2 37 78.4
Sc07g0001510 Simmondsia chinensis HOM05D002815 ORTHO05D003409 2.0e-10 67.8 37 81.1
CDE02G3240 Ceratophyllum demersum HOM05D002815 ORTHO05D003409 2.6e-10 67.4 37 83.8
Glyma.05G183300 Glycine max HOM05D002815 ORTHO05D003409 4.5e-10 66.6 37 75.7
Potri.007G082000 Populus trichocarpa HOM05D002815 ORTHO05D003409 4.5e-10 66.6 37 81.1
SEGI_12429 Sequoiadendron giganteum HOM05D002815 ORTHO05D003409 4.5e-10 66.6 37 81.1
Actinidia12206 Actinidia chinensis HOM05D002815 ORTHO05D003409 5.9e-10 66.2 37 78.4
Cc07_g16040 Coffea canephora HOM05D002815 ORTHO05D003409 5.9e-10 66.2 37 78.4
HanXRQChr10g0305391 Helianthus annuus HOM05D002815 ORTHO05D003409 5.9e-10 66.2 37 75.7
arahy.Tifrunner.gnm1.ann1.HMT8RT Arachis hypogaea HOM05D002815 ORTHO05D003409 7.7e-10 65.9 37 75.7
arahy.Tifrunner.gnm1.ann1.U2FY0G Arachis hypogaea HOM05D002815 ORTHO05D003409 7.7e-10 65.9 37 75.7
Lj1g0001740 Lotus japonicus HOM05D002815 ORTHO05D003409 7.7e-10 65.9 37 73.0
TPR.G2180 Trifolium pratense HOM05D002815 ORTHO05D003409 7.7e-10 65.9 37 75.7
TWI53G1894 Tripterygium wilfordii HOM05D002815 ORTHO05D003409 1.3e-09 65.1 37 75.7
ECA232G4479 Erigeron canadensis HOM05D002815 ORTHO05D003409 1.7e-09 64.7 34 79.4
Sc03g0004290 Simmondsia chinensis HOM05D002815 ORTHO05D003409 1.7e-09 64.7 37 81.1
AL6G20450 Arabidopsis lyrata HOM05D002815 ORTHO05D003409 2.2e-09 64.3 37 75.7
Ca_17698_v3 Cicer arietinum L. HOM05D002815 ORTHO05D003409 2.2e-09 64.3 37 73.0
VMungo0251G0260 Vigna mungo HOM05D002815 ORTHO05D003409 2.2e-09 64.3 34 76.5
HanXRQChr09g0254771 Helianthus annuus HOM05D002815 ORTHO05D003409 2.9e-09 63.9 37 78.4
Glyma.20G028200 Glycine max HOM05D002815 ORTHO05D003409 3.8e-09 63.5 37 75.7
PSO204G0001 Papaver somniferum HOM05D002815 ORTHO05D003409 3.8e-09 63.5 37 75.7
SMO367G1178 Selaginella moellendorffii HOM05D002815 ORTHO05D003409 5.0e-09 63.2 35 74.3
AT5G10010 Arabidopsis thaliana HOM05D002815 ORTHO05D003409 6.5e-09 62.8 37 73.0
Carub.0006s0847 Capsella rubella HOM05D002815 ORTHO05D003409 6.5e-09 62.8 37 73.0
Thhalv10013514m.g Eutrema salsugineum HOM05D002815 ORTHO05D003409 6.5e-09 62.8 37 73.0
Mapoly0126s0032 Marchantia polymorpha HOM05D002815 ORTHO05D003409 6.5e-09 62.8 37 75.7
Nn5g28923 Nelumbo nucifera HOM05D002815 ORTHO05D003409 6.5e-09 62.8 37 73.0
HPP92_018242 Vanilla planifolia HOM05D002815 ORTHO05D003409 8.5e-09 62.4 37 75.7
MD15G1083500 Malus domestica HOM05D002815 ORTHO05D003409 1.1e-08 62.0 37 73.0
Prupe.1G436000 Prunus persica HOM05D002815 ORTHO05D003409 1.1e-08 62.0 37 75.7
vmacro22670 Vaccinium macrocarpon HOM05D002815 ORTHO05D003409 1.1e-08 62.0 37 73.0
Aqoxy5G01953 Aquilegia oxysepala HOM05D002815 ORTHO05D003409 1.4e-08 61.6 37 73.0
BcaB08g37149 Brassica carinata HOM05D002815 ORTHO05D003409 1.4e-08 61.6 37 70.3
Sed0017782 Sechium edule HOM05D002815 ORTHO05D003409 2.5e-08 60.8 28 96.4
BcaB05g21510 Brassica carinata HOM05D002815 ORTHO05D003409 4.2e-08 60.1 34 70.6
BcaB01g05552 Brassica carinata HOM05D002815 ORTHO05D003409 5.5e-08 59.7 37 67.6
A03p04360 Brassica napus HOM05D002815 ORTHO05D003409 5.5e-08 59.7 37 67.6
C03p04810 Brassica napus HOM05D002815 ORTHO05D003409 5.5e-08 59.7 37 67.6
C09p67550 Brassica napus HOM05D002815 ORTHO05D003409 5.5e-08 59.7 36 69.4
BolC9t59516H Brassica oleracea HOM05D002815 ORTHO05D003409 5.5e-08 59.7 36 69.4
BraA03t09780Z Brassica rapa HOM05D002815 ORTHO05D003409 5.5e-08 59.7 37 67.6
Gohir.D12G093900 Gossypium hirsutum HOM05D002815 ORTHO05D003409 7.2e-08 59.3 37 73.0
PGR102G0114 Punica granatum HOM05D002815 ORTHO05D003409 1.2e-07 58.5 37 67.6
BcaC04g19355 Brassica carinata HOM05D002815 ORTHO05D003409 2.1e-07 57.8 35 68.6
A10p27480 Brassica napus HOM05D002815 ORTHO05D003409 2.1e-07 57.8 35 68.6
BraA10t44800Z Brassica rapa HOM05D002815 ORTHO05D003409 2.1e-07 57.8 35 68.6
unitig_736.g22623 Utricularia gibba HOM05D002815 ORTHO05D003409 2.7e-07 57.4 37 62.2
CsaV3_6G045970 Cucumis sativus L. HOM05D002815 ORTHO05D003409 6.1e-07 56.2 37 64.9
Pp3c9_21820 Physcomitrium patens HOM05D002815 ORTHO05D003409 7.9e-07 55.8 37 67.6
ATR0564G233 Amborella trichopoda HOM05D002815 ORTHO05D003409 1.0e-06 55.5 37 70.3
Pp3c15_14660 Physcomitrium patens HOM05D002815 ORTHO05D003409 1.0e-06 55.5 37 67.6
Zm00001eb078940 Zea mays HOM05D002815 ORTHO05D003409 1.0e-06 55.5 37 62.2
Lalb_Chr11g0068021 Lupinus albus HOM05D002815 ORTHO05D003409 2.3e-06 54.3 36 61.1
Zm00001eb425460 Zea mays HOM05D002815 ORTHO05D003409 2.3e-06 54.3 33 66.7
AL8G42410 Arabidopsis lyrata HOM05D002815 ORTHO05D003409 3.9e-06 53.5 38 63.2
CBR_g49135 Chara braunii HOM05D002815 ORTHO05D003409 6.7e-06 52.8 37 56.8
Prupe.6G339200 Prunus persica HOM05D002815 ORTHO05D048687 6.7e-06 52.8 37 62.2
Nitab4.5_0001215g0030 Nicotiana tabacum HOM05D002815 ORTHO05D003409 8.8e-06 52.4 38 60.5


User provided reference genes

Program Settings