Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017356001 Vitis vinifera HOM05D007527 ORTHO05D009523 7.1e-63 243.8 128 100.0
Actinidia15754 Actinidia chinensis HOM05D007527 ORTHO05D009523 1.5e-23 113.2 135 52.6
COL.COLO4_11916 Corchorus olitorius HOM05D007527 ORTHO05D009523 2.5e-23 112.5 127 52.0
Dinv30616 Davidia involucrata HOM05D007527 ORTHO05D009523 2.5e-23 112.5 97 66.0
Thecc.06G029900 Theobroma cacao HOM05D007527 ORTHO05D009523 5.5e-23 111.3 127 49.6
CiPaw.01G249100 Carya illinoinensis HOM05D007527 ORTHO05D009523 1.2e-22 110.2 109 56.0
Gohir.A09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 2.1e-22 109.4 128 50.8
TWI12G0113 Tripterygium wilfordii HOM05D007527 ORTHO05D009523 2.7e-22 109.0 130 49.2
Gorai.006G101400 Gossypium raimondii HOM05D007527 ORTHO05D009523 6.1e-22 107.8 128 50.0
Gohir.D09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 2.3e-21 105.9 127 49.6
CsaV3_4G001960 Cucumis sativus L. HOM05D007527 ORTHO05D009523 8.8e-21 104.0 108 52.8
MSTRG.5063 Avicennia marina HOM05D007527 ORTHO05D009523 2.6e-20 102.4 103 56.3
Sabra03G0018000 Salix brachista HOM05D007527 ORTHO05D009523 5.7e-20 101.3 146 47.9
vmacro16881 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 5.7e-20 101.3 107 50.5
Rhsim12G0190600 Rhododendron simsii HOM05D007527 ORTHO05D009523 7.4e-20 100.9 140 43.6
Atru.chr1.2902 Acer truncatum HOM05D007527 ORTHO05D009523 1.3e-19 100.1 131 49.6
MELO3C017840.2 Cucumis melo HOM05D007527 ORTHO05D009523 1.3e-19 100.1 125 47.2
Ciclev10026543m.g Citrus clementina HOM05D007527 ORTHO05D009523 3.7e-19 98.6 142 48.6
CSS0000513 Camellia sinensis var. sinensis HOM05D007527 ORTHO05D009523 8.2e-19 97.4 104 55.8
Cfa001953 Carpinus fangiana HOM05D007527 ORTHO05D009523 8.2e-19 97.4 151 41.1
ClCG07G012200 Citrullus lanatus HOM05D007527 ORTHO05D009523 1.4e-18 96.7 103 50.5
Migut.N01835 Erythranthe guttata HOM05D007527 ORTHO05D009523 1.4e-18 96.7 97 58.8
MD17G1213600 Malus domestica HOM05D007527 ORTHO05D009523 1.4e-18 96.7 98 52.0
SGA_v2.0_scaffold43G16304 Striga asiatica HOM05D007527 ORTHO05D009523 1.4e-18 96.7 129 49.6
Duzib160G0519 Durio zibethinus HOM05D007527 ORTHO05D009523 1.8e-18 96.3 93 53.8
Manes.11G058100 Manihot esculenta HOM05D007527 ORTHO05D009523 3.1e-18 95.5 120 50.0
Cc04_g04490 Coffea canephora HOM05D007527 ORTHO05D009523 9.1e-18 94.0 136 43.4
Manes.04G111800 Manihot esculenta HOM05D007527 ORTHO05D009523 9.1e-18 94.0 141 46.1
Hund06552 Selenicereus undatus HOM05D007527 ORTHO05D009523 2.0e-17 92.8 102 53.9
TAR383G1076 Trochodendron aralioides HOM05D007527 ORTHO05D009523 2.0e-17 92.8 83 63.9
CAN.G407.74 Capsicum annuum HOM05D007527 ORTHO05D009523 3.5e-17 92.0 95 55.8
Sc07g0004280 Simmondsia chinensis HOM05D007527 ORTHO05D009523 7.7e-17 90.9 96 56.2
Nitab4.5_0003463g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 1.0e-16 90.5 95 53.7
Peaxi162Scf00332g00530 Petunia axillaris HOM05D007527 ORTHO05D009523 1.3e-16 90.1 117 50.4
Sed0020992 Sechium edule HOM05D007527 ORTHO05D009523 1.7e-16 89.7 88 47.7
Eucgr.B02436 Eucalyptus grandis HOM05D007527 ORTHO05D009523 2.2e-16 89.4 95 54.7
DCAR_021351 Daucus carota HOM05D002695 ORTHO05D002964 3.8e-16 88.6 129 43.4
Potri.001G202000 Populus trichocarpa HOM05D007527 ORTHO05D009523 3.8e-16 88.6 127 45.7
Hma1.2p1_0242F.1_g100670 Hydrangea macrophylla HOM05D007527 ORTHO05D009523 5.0e-16 88.2 97 54.6
Lsat_1_v5_gn_5_131420 Lactuca sativa HOM05D007527 ORTHO05D009523 5.0e-16 88.2 84 58.3
PGR102G2450 Punica granatum HOM05D007527 ORTHO05D009523 6.5e-16 87.8 94 54.3
CANSAT56G2488 Cannabis sativa HOM05D007527 ORTHO05D009523 1.9e-15 86.3 127 42.5
Sopen03g035730 Solanum pennellii HOM05D007527 ORTHO05D009523 5.5e-15 84.7 111 46.8
Nitab4.5_0008560g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 7.2e-15 84.3 94 51.1
RcHm_v2.0_Chr2g0134751 Rosa chinensis HOM05D007527 ORTHO05D009523 9.4e-15 84.0 98 46.9
ECA234G1859 Erigeron canadensis HOM05D007527 ORTHO05D009523 1.2e-14 83.6 59 69.5
Cpa.g.sc67.40 Carica papaya HOM05D007527 ORTHO05D009523 1.6e-14 83.2 111 45.9
Haze_16571 Corylus avellana HOM05D007527 ORTHO05D009523 2.1e-14 82.8 129 44.2
PGSC0003DMG400000643 Solanum tuberosum HOM05D007527 ORTHO05D009523 2.1e-14 82.8 125 44.0
FvH4_6g29470 Fragaria vesca HOM05D007527 ORTHO05D009523 2.7e-14 82.4 95 50.5
vmacro07515 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 2.7e-14 82.4 87 50.6
FAN14G2734 Fragaria x ananassa HOM05D007527 ORTHO05D009523 3.6e-14 82.0 97 48.5
HanXRQChr10g0302821 Helianthus annuus HOM05D007527 ORTHO05D009523 3.6e-14 82.0 115 44.3
Sp3g14230 Schrenkiella parvula HOM05D007527 ORTHO05D009523 3.6e-14 82.0 97 46.4
Thhalv10021721m.g Eutrema salsugineum HOM05D007527 ORTHO05D009523 4.7e-14 81.6 126 44.4
RcHm_v2.0_Chr2g0134671 Rosa chinensis HOM05D007527 ORTHO05D009523 4.7e-14 81.6 101 50.5
Solyc03g116800.4 Solanum lycopersicum HOM05D007527 ORTHO05D009523 4.7e-14 81.6 111 45.9
Aqoxy7G01859 Aquilegia oxysepala HOM05D007527 ORTHO05D009523 8.0e-14 80.9 115 43.5
FAN09G0177 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.0e-13 80.5 95 48.4
FAN02G0939 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.4e-13 80.1 94 50.0
FAN05G4324 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.4e-13 80.1 129 44.2
Os02g0804400 Oryza sativa ssp. japonica HOM05D007527 ORTHO05D009523 1.4e-13 80.1 61 70.5
BcaC09g48568 Brassica carinata HOM05D007527 ORTHO05D009523 1.8e-13 79.7 129 42.6
C01p48470 Brassica napus HOM05D007527 ORTHO05D009523 1.8e-13 79.7 129 42.6
BolC1t04807H Brassica oleracea HOM05D007527 ORTHO05D009523 1.8e-13 79.7 129 42.6
Nn8g39533 Nelumbo nucifera HOM05D007527 ORTHO05D009523 1.8e-13 79.7 61 60.7
BcaB04g20897 Brassica carinata HOM05D007527 ORTHO05D009523 3.0e-13 79.0 97 45.4
CDE04G3040 Ceratophyllum demersum HOM05D002695 ORTHO05D002964 4.0e-13 78.6 77 51.9
CDE03G0516 Ceratophyllum demersum HOM05D007527 ORTHO05D009523 8.8e-13 77.4 74 54.1
MBI15_g00959_MAGBIO Magnolia biondii HOM05D007527 ORTHO05D009523 8.8e-13 77.4 101 46.5
PSO170G5637 Papaver somniferum HOM05D007527 ORTHO05D009523 1.2e-12 77.0 79 54.4
A01p38200 Brassica napus HOM05D007527 ORTHO05D009523 2.0e-12 76.3 128 40.6
BraA01t03878Z Brassica rapa HOM05D007527 ORTHO05D009523 2.0e-12 76.3 128 40.6
Lj3g0017680 Lotus japonicus HOM05D007527 ORTHO05D009523 2.0e-12 76.3 108 43.5
Lalb_Chr24g0395451 Lupinus albus HOM05D007527 ORTHO05D009523 2.0e-12 76.3 83 51.8
VMungo1080G0810 Vigna mungo HOM05D007527 ORTHO05D009523 2.0e-12 76.3 110 42.7
Phvul.005G178900 Phaseolus vulgaris HOM05D007527 ORTHO05D009523 3.4e-12 75.5 108 42.6
arahy.Tifrunner.gnm1.ann1.HBF5UW Arachis hypogaea HOM05D007527 ORTHO05D009523 5.7e-12 74.7 64 59.4
arahy.Tifrunner.gnm1.ann1.JM0XW1 Arachis hypogaea HOM05D007527 ORTHO05D009523 5.7e-12 74.7 64 59.4
AL3G28550 Arabidopsis lyrata HOM05D007527 ORTHO05D009523 7.5e-12 74.3 128 39.8
Prupe.3G089500 Prunus persica HOM05D007527 ORTHO05D009523 7.5e-12 74.3 103 42.7
PSO017G1806 Papaver somniferum HOM05D007527 ORTHO05D009523 9.8e-12 73.9 117 43.6
RcHm_v2.0_Chr2g0134971 Rosa chinensis HOM05D007527 ORTHO05D009523 1.7e-11 73.2 98 48.0
Psat5g303480 Pisum sativum HOM05D007527 ORTHO05D009523 2.8e-11 72.4 101 46.5
Carub.0003s1564 Capsella rubella HOM05D007527 ORTHO05D009523 3.7e-11 72.0 117 41.0
Aa31LG8G3080 Aethionema arabicum HOM05D007527 ORTHO05D009523 4.8e-11 71.6 58 58.6
ATR0716G018 Amborella trichopoda HOM05D007527 ORTHO05D009523 4.8e-11 71.6 63 52.4
AT3G15900 Arabidopsis thaliana HOM05D007527 ORTHO05D009523 4.8e-11 71.6 122 41.0
Ah.01g006590 Amaranthus hybridus HOM05D007527 ORTHO05D009523 6.3e-11 71.2 88 47.7
Zm00001eb192090 Zea mays HOM05D007527 ORTHO05D009523 6.3e-11 71.2 110 44.5
HPP92_017057 Vanilla planifolia HOM05D007527 ORTHO05D009523 1.8e-10 69.7 81 44.4
Glyma.15G006800 Glycine max HOM05D007527 ORTHO05D009523 4.1e-10 68.6 121 39.7
Medtr2g104040 Medicago truncatula HOM05D007527 ORTHO05D009523 5.4e-10 68.2 66 56.1
vmacro16888 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.2e-09 67.0 52 57.7
CARHR091010 Cardamine hirsuta HOM05D007527 ORTHO05D009523 4.5e-09 65.1 53 56.6
vmacro16886 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 5.9e-09 64.7 46 63.0
Mapoly0006s0085 Marchantia polymorpha HOM05D007527 ORTHO05D009523 2.9e-08 62.4 74 44.6


User provided reference genes

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