Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 1.6e-68 262.7 138 100.0
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 7.0e-24 114.4 128 54.7
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 1.6e-23 113.2 140 51.4
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 1.9e-21 106.3 116 52.6
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 4.7e-20 101.7 78 61.5
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 1.0e-19 100.5 138 49.3
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 1.8e-19 99.8 97 55.7
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 1.5e-18 96.7 142 46.5
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 3.4e-18 95.5 120 52.5
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 2.2e-17 92.8 129 47.3
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 2.9e-17 92.4 110 47.3
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 6.4e-17 91.3 104 51.0
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 1.9e-16 89.7 122 48.4
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 1.9e-16 89.7 123 47.2
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 3.2e-16 89.0 134 43.3
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 7.0e-16 87.8 137 47.4
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.2e-15 87.0 123 49.6
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 2.0e-15 86.3 114 48.2
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 3.5e-15 85.5 129 48.8
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 3.5e-15 85.5 108 53.7
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 4.6e-15 85.1 107 45.8
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 1.0e-14 84.0 56 67.9
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 1.0e-14 84.0 85 61.2
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 1.3e-14 83.6 88 55.7
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 2.3e-14 82.8 48 75.0
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 3.0e-14 82.4 137 46.0
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 3.0e-14 82.4 132 41.7
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 3.9e-14 82.0 97 52.6
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 6.6e-14 81.3 144 38.9
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 8.6e-14 80.9 110 42.7
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 8.6e-14 80.9 106 50.0
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 8.6e-14 80.9 49 75.5
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 1.5e-13 80.1 144 40.3
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.5e-13 80.1 139 37.4
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 1.5e-13 80.1 154 41.6
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 1.5e-13 80.1 126 44.4
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 3.3e-13 79.0 93 51.6
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 4.3e-13 78.6 137 42.3
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 4.3e-13 78.6 117 48.7
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 7.3e-13 77.8 97 55.7
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 7.3e-13 77.8 136 46.3
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 9.5e-13 77.4 138 39.1
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 2.1e-12 76.3 138 41.3
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 2.8e-12 75.9 82 54.9
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 4.7e-12 75.1 44 68.2
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 6.2e-12 74.7 121 43.0
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 8.1e-12 74.3 50 64.0
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 1.1e-11 73.9 96 44.8
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 1.1e-11 73.9 99 51.5
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 1.8e-11 73.2 94 44.7
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 2.3e-11 72.8 72 51.4
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 2.3e-11 72.8 106 46.2
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 2.3e-11 72.8 106 46.2
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 3.1e-11 72.4 140 44.3
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 4.0e-11 72.0 140 44.3
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 6.8e-11 71.2 69 49.3
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 6.8e-11 71.2 110 46.4
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 8.9e-11 70.9 134 38.8
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 2.0e-10 69.7 86 50.0
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 2.6e-10 69.3 131 39.7
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 3.4e-10 68.9 143 37.1
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 5.8e-10 68.2 139 39.6
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 5.8e-10 68.2 41 68.3
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 9.8e-10 67.4 107 44.9
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 2.9e-09 65.9 73 52.1
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 4.9e-09 65.1 51 60.8
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 3.2e-08 62.4 49 55.1
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 4.1e-08 62.0 76 52.6
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 4.1e-08 62.0 49 55.1
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 5.4e-08 61.6 136 36.8
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 5.4e-08 61.6 91 42.9
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 7.1e-08 61.2 76 44.7
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 9.2e-08 60.8 76 53.9
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 9.2e-08 60.8 60 48.3
CARHR042660 Cardamine hirsuta HOM05D007722 ORTHO05D009730 9.2e-08 60.8 145 42.1
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 1.2e-07 60.5 101 36.6
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 2.1e-07 59.7 82 47.6
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 2.1e-07 59.7 109 46.8
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 7.8e-07 57.8 42 59.5
C01p48660 Brassica napus HOM05D000771 ORTHO05D001963 3.0e-06 55.8 70 50.0
BcaC05g28932 Brassica carinata HOM05D000020 ORTHO05D000543 5.1e-06 55.1 49 46.9
C05p50590 Brassica napus HOM05D000020 ORTHO05D000543 5.1e-06 55.1 49 46.9
AL1G60800 Arabidopsis lyrata HOM05D007722 ORTHO05D009730 8.6e-06 54.3 107 45.8


User provided reference genes

Program Settings