Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017054001 Vitis vinifera HOM05D005658 ORTHO05D006989 1.1e-150 536.6 270 100.0
GSVIVG01017053001 Vitis vinifera HOM05D005658 ORTHO05D006989 1.0e-90 337.4 228 75.4
CiPaw.01G234800 Carya illinoinensis HOM05D005658 ORTHO05D006989 1.1e-84 317.4 196 80.6
Potri.003G051700 Populus trichocarpa HOM05D005658 ORTHO05D006989 1.4e-84 317.0 198 78.8
Manes.04G130900 Manihot esculenta HOM05D005658 ORTHO05D006989 1.8e-84 316.6 196 79.1
Duzib235G1329 Durio zibethinus HOM05D005658 ORTHO05D006989 4.1e-84 315.5 196 80.6
Lj5g0010105 Lotus japonicus HOM05D005658 ORTHO05D006989 4.5e-83 312.0 196 81.6
Lj5g0006747 Lotus japonicus HOM05D005658 ORTHO05D006989 7.7e-83 311.2 190 82.1
Gorai.003G064300 Gossypium raimondii HOM05D005658 ORTHO05D006989 1.0e-82 310.8 193 78.2
Glyma.07G018600 Glycine max HOM05D005658 ORTHO05D006989 1.3e-82 310.5 196 79.1
Gohir.D03G062533 Gossypium hirsutum HOM05D005658 ORTHO05D006989 1.3e-82 310.5 193 78.2
TAR383G0711 Trochodendron aralioides HOM05D005658 ORTHO05D006989 1.3e-82 310.5 196 78.6
Phvul.010G147700 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 6.5e-82 308.1 207 75.4
PGR102G0856 Punica granatum HOM05D005658 ORTHO05D006989 8.5e-82 307.8 198 78.3
TPR.G38603 Trifolium pratense HOM05D005658 ORTHO05D006989 8.5e-82 307.8 196 77.6
Lalb_Chr04g0262841 Lupinus albus HOM05D005658 ORTHO05D006989 1.9e-81 306.6 195 77.4
arahy.Tifrunner.gnm1.ann1.5XEL3K Arachis hypogaea HOM05D005658 ORTHO05D006989 2.5e-81 306.2 195 77.4
Haze_16346 Corylus avellana HOM05D005658 ORTHO05D006989 7.2e-81 304.7 196 76.5
Eucgr.J02954 Eucalyptus grandis HOM05D005658 ORTHO05D006989 1.2e-80 303.9 193 76.7
Nn3g18122 Nelumbo nucifera HOM05D005658 ORTHO05D006989 1.2e-80 303.9 190 77.9
CANSAT56G4082 Cannabis sativa HOM05D005658 ORTHO05D006989 2.1e-80 303.1 196 77.0
RcHm_v2.0_Chr2g0139251 Rosa chinensis HOM05D005658 ORTHO05D006989 2.1e-80 303.1 196 74.5
FvH4_6g31890 Fragaria vesca HOM05D005658 ORTHO05D006989 3.6e-80 302.4 196 76.0
Glyma.08G203800 Glycine max HOM05D005658 ORTHO05D006989 3.6e-80 302.4 196 77.0
Gohir.A02G119700 Gossypium hirsutum HOM05D005658 ORTHO05D006989 3.6e-80 302.4 193 77.2
Aqoxy7G01547 Aquilegia oxysepala HOM05D005658 ORTHO05D006989 4.6e-80 302.0 191 79.1
Psat5g078360 Pisum sativum HOM05D005658 ORTHO05D006989 4.6e-80 302.0 196 77.0
Thecc.06G094500 Theobroma cacao HOM05D005658 ORTHO05D006989 4.6e-80 302.0 196 76.5
VMungo0331G1814 Vigna mungo HOM05D005658 ORTHO05D006989 6.1e-80 301.6 207 72.9
Prupe.3G064800 Prunus persica HOM05D005658 ORTHO05D006989 7.9e-80 301.2 194 75.8
Psat7g255000 Pisum sativum HOM05D005658 ORTHO05D006989 1.4e-79 300.4 196 76.0
MD09G1208600 Malus domestica HOM05D005658 ORTHO05D006989 3.0e-79 299.3 195 74.4
Ciclev10026541m.g Citrus clementina HOM05D005658 ORTHO05D006989 5.1e-79 298.5 195 75.9
FAN14G0081 Fragaria x ananassa HOM05D005658 ORTHO05D006989 6.7e-79 298.1 196 75.0
Cfa002103 Carpinus fangiana HOM05D005658 ORTHO05D006989 2.5e-78 296.2 196 75.0
Actinidia08995 Actinidia chinensis HOM05D005658 ORTHO05D006989 3.3e-78 295.8 193 77.7
THA.LOC104817977 Tarenaya hassleriana HOM05D005658 ORTHO05D006989 4.3e-78 295.4 194 72.2
CSS0031663 Camellia sinensis var. sinensis HOM05D005658 ORTHO05D006989 5.7e-78 295.0 188 76.6
MBI04_g04855_MAGBIO Magnolia biondii HOM05D005658 ORTHO05D006989 5.7e-78 295.0 188 78.2
CANSAT56G2118 Cannabis sativa HOM05D005658 ORTHO05D006989 1.7e-77 293.5 191 75.9
FAN02G2498 Fragaria x ananassa HOM05D005658 ORTHO05D006989 2.2e-77 293.1 196 73.5
ECA234G0336 Erigeron canadensis HOM05D005658 ORTHO05D006989 8.2e-77 291.2 196 76.5
Dinv38010 Davidia involucrata HOM05D005658 ORTHO05D006989 1.8e-76 290.0 168 83.9
RcHm_v2.0_Chr2g0139241 Rosa chinensis HOM05D005658 ORTHO05D006989 1.8e-76 290.0 190 74.7
HanXRQChr10g0313501 Helianthus annuus HOM05D005658 ORTHO05D006989 6.9e-76 288.1 187 78.1
Solyc03g120540.3 Solanum lycopersicum HOM05D005658 ORTHO05D006989 6.9e-76 288.1 186 76.3
CAN.G438.34 Capsicum annuum HOM05D005658 ORTHO05D006989 1.5e-75 287.0 186 75.3
SalBow7G0412 Salvia bowleyana HOM05D005658 ORTHO05D006989 4.5e-75 285.4 185 76.8
CARHR091380 Cardamine hirsuta HOM05D005658 ORTHO05D006989 5.9e-75 285.0 192 72.9
Cc04_g02920 Coffea canephora HOM05D005658 ORTHO05D006989 7.7e-75 284.6 191 74.9
DCAR_016205 Daucus carota HOM05D005658 ORTHO05D006989 7.7e-75 284.6 202 72.3
Sabra03G0027300 Salix brachista HOM05D005658 ORTHO05D006989 2.9e-74 282.7 178 79.2
Nitab4.5_0004205g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 5.0e-74 282.0 186 76.3
QL05p021437 Quercus lobata HOM05D005658 ORTHO05D006989 5.0e-74 282.0 170 81.8
AL3G28880 Arabidopsis lyrata HOM05D005658 ORTHO05D006989 6.5e-74 281.6 197 69.5
MSTRG.9467 Avicennia marina HOM05D005658 ORTHO05D006989 6.5e-74 281.6 208 70.2
Nitab4.5_0001315g0030 Nicotiana tabacum HOM05D005658 ORTHO05D006989 6.5e-74 281.6 186 76.3
AT3G16190 Arabidopsis thaliana HOM05D005658 ORTHO05D006989 1.1e-73 280.8 197 70.6
CDE08G1506 Ceratophyllum demersum HOM05D005658 ORTHO05D006989 1.4e-73 280.4 190 72.6
arahy.Tifrunner.gnm1.ann1.JS39C6 Arachis hypogaea HOM05D005658 ORTHO05D006989 2.5e-73 279.6 189 75.7
SGA_v2.0_scaffold68G22977 Striga asiatica HOM05D005658 ORTHO05D006989 2.5e-73 279.6 185 74.1
PGSC0003DMG400002629 Solanum tuberosum HOM05D005658 ORTHO05D006989 3.2e-73 279.3 188 72.9
Thhalv10021560m.g Eutrema salsugineum HOM05D005658 ORTHO05D006989 4.2e-73 278.9 197 70.1
VMungo0331G0597 Vigna mungo HOM05D005658 ORTHO05D006989 4.2e-73 278.9 196 71.9
BcaC09g48588 Brassica carinata HOM05D005658 ORTHO05D006989 1.2e-72 277.3 197 69.5
COL.COLO4_30455 Corchorus olitorius HOM05D005658 ORTHO05D006989 2.1e-72 276.6 190 73.2
Gohir.D03G066800 Gossypium hirsutum HOM05D005658 ORTHO05D006989 2.7e-72 276.2 170 80.0
Phvul.010G147800 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 3.6e-72 275.8 196 70.9
Ca_20421_v3 Cicer arietinum L. HOM05D005658 ORTHO05D006989 6.1e-72 275.0 170 79.4
PSO210G2136 Papaver somniferum HOM05D005658 ORTHO05D006989 6.1e-72 275.0 198 71.2
EL10Ac9g22053 Beta vulgaris HOM05D005658 ORTHO05D006989 7.9e-72 274.6 196 71.9
Sp3g14560 Schrenkiella parvula HOM05D005658 ORTHO05D006989 1.0e-71 274.2 197 69.0
A05p33310 Brassica napus HOM05D005658 ORTHO05D006989 1.4e-71 273.9 198 69.7
vmacro16973 Vaccinium macrocarpon HOM05D005658 ORTHO05D006989 2.3e-71 273.1 179 76.5
PSO421G0294 Papaver somniferum HOM05D005658 ORTHO05D006989 6.7e-71 271.6 190 73.2
ATR0736G109 Amborella trichopoda HOM05D005658 ORTHO05D006989 8.8e-71 271.2 188 71.3
C05p50310 Brassica napus HOM05D005658 ORTHO05D006989 1.1e-70 270.8 198 68.7
Medtr4g011330 Medicago truncatula HOM05D005658 ORTHO05D006989 1.5e-70 270.4 170 75.9
unitig_746.g26661 Utricularia gibba HOM05D005658 ORTHO05D006989 1.5e-70 270.4 194 69.1
Migut.D01014 Erythranthe guttata HOM05D005658 ORTHO05D006989 3.3e-70 269.2 186 72.6
Lsat_1_v5_gn_5_131001 Lactuca sativa HOM05D000012 ORTHO05D000804 3.3e-70 269.2 170 78.8
Rhsim12G0201100 Rhododendron simsii HOM05D005658 ORTHO05D006989 5.7e-70 268.5 169 78.7
BraA05t22156Z Brassica rapa HOM05D005658 ORTHO05D006989 9.7e-70 267.7 206 67.5
COL.COLO4_30457 Corchorus olitorius HOM05D005658 ORTHO05D006989 1.7e-69 266.9 173 76.9
Lj9A509T93 Lonicera japonica HOM05D005658 ORTHO05D006989 3.7e-69 265.8 179 75.4
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 4.8e-69 265.4 222 64.0
arahy.Tifrunner.gnm1.ann1.17ZCGM Arachis hypogaea HOM05D005658 ORTHO05D006989 6.3e-69 265.0 172 76.2
Nitab4.5_0001968g0140 Nicotiana tabacum HOM05D005658 ORTHO05D006989 8.2e-69 264.6 189 73.5
Migut.D01013 Erythranthe guttata HOM05D005658 ORTHO05D006989 2.4e-68 263.1 176 72.2
PSO210G3060 Papaver somniferum HOM05D005658 ORTHO05D006989 3.1e-68 262.7 191 72.3
Sopen03g039400 Solanum pennellii HOM05D005658 ORTHO05D006989 3.1e-68 262.7 173 75.7
FAN05G4480 Fragaria x ananassa HOM05D005658 ORTHO05D006989 4.1e-68 262.3 174 74.7
Os02g0276400 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 5.3e-68 261.9 186 71.0
ClCG09G001890 Citrullus lanatus HOM05D005658 ORTHO05D006989 9.1e-68 261.2 195 64.6
PSO063G2380 Papaver somniferum HOM05D005658 ORTHO05D006989 4.5e-67 258.8 196 67.9
SalBow7G1899 Salvia bowleyana HOM05D005658 ORTHO05D006989 5.9e-67 258.5 189 68.8
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 1.9e-65 253.4 175 71.4
Sed0000814 Sechium edule HOM05D005658 ORTHO05D006989 2.5e-65 253.1 196 64.3
SEGI_12338 Sequoiadendron giganteum HOM05D005658 ORTHO05D006989 4.2e-65 252.3 185 68.1
HPP92_003927 Vanilla planifolia HOM05D005658 ORTHO05D006989 1.2e-64 250.8 182 68.7
Sc12g0009500 Simmondsia chinensis HOM05D005658 ORTHO05D006989 3.6e-64 249.2 174 71.8
Ciclev10026617m.g Citrus clementina HOM05D005658 ORTHO05D006989 4.7e-64 248.8 163 72.4
Sed0023183 Sechium edule HOM05D005658 ORTHO05D006989 6.1e-64 248.4 190 63.7
CsaV3_7G033450 Cucumis sativus L. HOM05D005658 ORTHO05D006989 8.0e-64 248.1 192 63.5
Os02g0276200 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 1.0e-63 247.7 178 70.8
Oeu029646.1 Olea europaea HOM05D005658 ORTHO05D006989 3.0e-63 246.1 173 72.3
Carub.0003s1594 Capsella rubella HOM05D005658 ORTHO05D006989 1.5e-62 243.8 170 68.8
COL.COLO4_18473 Corchorus olitorius HOM05D005658 ORTHO05D006989 4.4e-62 242.3 190 66.8
Psat7g255080 Pisum sativum HOM05D005658 ORTHO05D006989 7.4e-62 241.5 142 82.4
MELO3C027085.2 Cucumis melo HOM05D005658 ORTHO05D006989 1.3e-61 240.7 195 62.1
TPR.G40810 Trifolium pratense HOM05D005658 ORTHO05D006989 8.2e-61 238.0 142 82.4
SGA_v2.0_scaffold4G02011 Striga asiatica HOM05D005658 ORTHO05D006989 4.1e-60 235.7 166 69.9
AUR62011683 Chenopodium quinoa HOM05D005658 ORTHO05D006989 3.5e-59 232.6 170 70.6
Mapoly0052s0007 Marchantia polymorpha HOM05D005658 ORTHO05D006989 2.5e-57 226.5 185 59.5
Ah.01g021740 Amaranthus hybridus HOM05D005658 ORTHO05D006989 3.2e-57 226.1 170 70.6
SMO147G0229 Selaginella moellendorffii HOM05D005658 ORTHO05D006989 7.2e-57 224.9 190 62.1
AUR62016508 Chenopodium quinoa HOM05D005658 ORTHO05D006989 1.8e-55 220.3 194 62.4
Peaxi162Scf00015g00132 Petunia axillaris HOM05D005658 ORTHO05D006989 2.6e-54 216.5 183 63.4
AUR62016509 Chenopodium quinoa HOM05D005658 ORTHO05D006989 7.5e-54 214.9 170 66.5
Pp3c13_4590 Physcomitrium patens HOM05D005658 ORTHO05D006989 9.8e-54 214.5 188 58.5
Haze_16345 Corylus avellana HOM05D003600 ORTHO05D004129 1.6e-51 207.2 118 86.4
Atru.chr1.3413 Acer truncatum HOM05D005658 ORTHO05D006989 1.0e-50 204.5 121 84.3
Nitab4.5_0003039g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 2.2e-50 203.4 140 73.6
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 1.9e-49 200.3 200 52.5
Cpa.g.sc1241.2 Carica papaya HOM05D005658 ORTHO05D006989 3.2e-49 199.5 133 71.4
CBR_g48432 Chara braunii HOM05D005658 ORTHO05D006989 6.1e-48 195.3 200 52.5
Peaxi162Scf00015g00131 Petunia axillaris HOM05D005658 ORTHO05D006989 2.7e-43 179.9 186 54.8
Glyma.08G203700 Glycine max HOM05D005658 ORTHO05D006989 7.7e-43 178.3 118 74.6
Psat5g078240 Pisum sativum HOM05D005658 ORTHO05D006989 1.3e-42 177.6 117 74.4
Sed0018991 Sechium edule HOM05D005658 ORTHO05D006989 8.6e-42 174.9 133 63.2
Manes.11G037100 Manihot esculenta HOM05D005658 ORTHO05D006989 1.1e-41 174.5 170 59.4
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 3.4e-38 162.9 183 47.0
AUR62011684 Chenopodium quinoa HOM05D005658 ORTHO05D006989 2.2e-37 160.2 114 71.1
CAN.G214.3 Capsicum annuum HOM05D005658 ORTHO05D006989 4.7e-24 115.9 116 55.2
QL02p037511 Quercus lobata HOM05D005658 ORTHO05D006989 9.5e-17 91.7 61 72.1
Atru.chr1.3414 Acer truncatum HOM05D005658 ORTHO05D006989 4.4e-14 82.8 68 63.2
TPR.G1351 Trifolium pratense HOM05D005658 ORTHO05D006989 3.0e-10 70.1 51 62.7
Sopen12g022580 Solanum pennellii HOM05D005658 ORTHO05D006989 5.1e-10 69.3 166 35.5
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 1.5e-09 67.8 170 27.6
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 2.5e-09 67.0 178 29.2
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 5.6e-09 65.9 175 29.1
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 9.6e-09 65.1 176 28.4
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 9.6e-09 65.1 170 29.4
Cre10.g448500 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 1.2e-08 64.7 199 29.1
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 1.2e-08 64.7 175 29.7
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 2.1e-08 63.9 182 30.2
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 2.1e-08 63.9 169 30.8
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 2.1e-08 63.9 172 27.9
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 2.8e-08 63.5 102 40.2
MCO09G426 Micromonas commoda HOM05D006499 ORTHO05D007874 2.8e-08 63.5 180 27.2
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 3.6e-08 63.2 172 28.5
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 6.2e-08 62.4 175 28.6
Cfa026003 Carpinus fangiana HOM05D006499 ORTHO05D007874 1.1e-07 61.6 150 31.3
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 1.1e-07 61.6 172 27.3
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 1.8e-07 60.8 175 28.6
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 1.8e-07 60.8 172 28.5
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 4.0e-07 59.7 172 27.9
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 6.8e-07 58.9 169 28.4
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 8.9e-07 58.5 172 26.7
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 8.9e-07 58.5 172 27.9
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 8.9e-07 58.5 172 26.7
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 1.2e-06 58.2 182 26.9
arahy.Tifrunner.gnm1.ann1.K04B1Q Arachis hypogaea HOM05D006661 ORTHO05D008369 1.2e-06 58.2 68 45.6
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 1.2e-06 58.2 176 27.8
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 1.5e-06 57.8 67 46.3
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 1.5e-06 57.8 172 29.1
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 2.0e-06 57.4 172 27.3
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 2.0e-06 57.4 175 26.9
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 2.0e-06 57.4 173 28.9
MCO13G030 Micromonas commoda HOM05D006499 ORTHO05D007874 2.0e-06 57.4 171 28.7
Zm00001eb237290 Zea mays HOM05D005658 ORTHO05D006989 2.0e-06 57.4 50 64.0
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 2.6e-06 57.0 172 26.7
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 2.6e-06 57.0 172 28.5
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 2.6e-06 57.0 169 29.0
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 2.6e-06 57.0 172 28.5
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 5.8e-06 55.8 174 25.3
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 5.8e-06 55.8 174 25.3
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 5.8e-06 55.8 179 29.1
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 5.8e-06 55.8 172 26.7
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 7.6e-06 55.5 188 29.3
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 7.6e-06 55.5 179 28.5
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 7.6e-06 55.5 182 28.6
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 9.9e-06 55.1 172 26.2
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 9.9e-06 55.1 172 26.2


User provided reference genes

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