Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 1.5e-206 722.6 359 100.0
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 1.2e-163 580.1 329 84.8
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.0e-159 567.0 330 83.9
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 5.1e-159 564.7 329 83.3
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 7.4e-158 560.8 330 82.1
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 9.0e-156 553.9 325 81.8
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 2.6e-155 552.4 328 81.7
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 3.4e-155 552.0 353 77.9
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 5.8e-155 551.2 338 79.9
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 3.8e-154 548.5 326 81.6
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 8.4e-154 547.4 323 82.0
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 1.4e-153 546.6 334 81.1
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 2.5e-153 545.8 324 81.8
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 9.3e-153 543.9 349 76.8
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 1.3e-151 540.0 351 75.5
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 6.7e-151 537.7 366 74.3
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 6.7e-151 537.7 330 79.4
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 6.7e-151 537.7 335 79.4
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 3.7e-149 531.9 337 77.4
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 8.2e-149 530.8 325 80.0
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 8.2e-149 530.8 336 78.6
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.1e-148 530.4 335 75.8
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 3.1e-148 528.9 337 76.9
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 5.3e-148 528.1 322 74.8
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.5e-147 526.6 337 76.9
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 2.2e-146 522.7 329 77.5
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 2.9e-146 522.3 322 74.2
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 1.1e-145 520.4 355 72.4
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 3.2e-145 518.8 330 77.6
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 7.2e-145 517.7 310 81.0
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 2.1e-144 516.2 310 80.6
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 2.3e-143 512.7 352 72.7
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 5.1e-143 511.5 310 80.0
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 8.8e-143 510.8 310 79.7
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 8.8e-143 510.8 314 79.6
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.5e-142 510.0 310 79.7
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 3.3e-142 508.8 346 72.3
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 7.4e-142 507.7 329 75.1
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 7.4e-142 507.7 343 73.5
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.7e-141 506.5 310 79.0
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 2.2e-141 506.1 352 71.3
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 3.7e-141 505.4 311 79.7
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 3.7e-141 505.4 311 79.7
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 3.7e-141 505.4 311 79.7
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 6.3e-141 504.6 313 79.2
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.8e-140 503.1 343 72.3
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 2.4e-140 502.7 314 75.5
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 3.1e-140 502.3 336 72.3
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 2.6e-139 499.2 321 74.5
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 5.9e-139 498.0 364 69.5
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 5.9e-139 498.0 279 86.4
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 5.9e-139 498.0 314 76.1
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.0e-138 497.3 314 77.1
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 1.3e-138 496.9 330 74.5
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.3e-138 496.9 330 74.5
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 2.9e-138 495.7 322 74.2
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 8.5e-138 494.2 313 76.0
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.9e-137 493.0 323 74.3
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 7.2e-137 491.1 337 73.6
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 4.7e-136 488.4 338 72.8
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 6.1e-136 488.0 339 70.8
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 7.9e-136 487.6 330 72.1
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 5.7e-134 481.5 339 70.8
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 4.8e-133 478.4 340 70.6
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.4e-132 476.9 306 75.5
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 2.7e-128 462.6 310 70.6
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.4e-127 460.3 315 72.1
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.3e-127 459.5 315 72.1
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 1.5e-126 456.8 325 68.9
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 9.7e-126 454.1 295 73.9
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 9.7e-126 454.1 325 68.6
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.1e-124 450.7 279 79.2
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.8e-124 449.9 338 65.1
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 5.3e-124 448.4 334 66.5
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 7.0e-124 448.0 325 68.0
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 9.1e-124 447.6 310 70.6
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.2e-123 447.2 337 65.0
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 1.7e-122 443.4 314 67.2
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 2.2e-122 443.0 314 66.6
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 2.9e-122 442.6 315 69.5
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 5.0e-122 441.8 307 75.2
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 3.2e-121 439.1 315 68.3
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 3.6e-120 435.6 315 66.0
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 1.2e-112 410.6 331 63.4
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.0e-110 403.3 252 80.2
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 1.3e-109 400.6 264 76.1
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 8.3e-109 397.9 254 77.2
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 8.3e-109 397.9 320 57.5
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 5.9e-107 391.7 319 63.6
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 7.2e-105 384.8 308 58.4
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 2.8e-104 382.9 325 60.3
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.6e-96 357.1 309 54.4
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 4.0e-95 352.4 350 50.6
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 6.0e-91 338.6 336 49.4
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 6.0e-91 338.6 336 49.4
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.5e-89 334.0 308 51.3
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 4.3e-89 332.4 330 54.2
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 3.6e-88 329.3 356 47.5
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.2e-86 324.3 308 50.6
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.0e-86 323.6 317 48.9
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 6.4e-85 318.5 248 64.9
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 8.3e-85 318.2 344 50.3
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.1e-84 317.8 308 48.7
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.2e-83 314.3 356 46.3
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 3.9e-82 309.3 259 57.5
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 7.8e-75 285.0 323 48.9
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 1.6e-72 277.3 318 45.3
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.5e-62 244.2 213 55.9
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 3.9e-50 203.0 278 42.8
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 6.1e-35 152.5 364 32.1
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 3.4e-30 136.7 121 59.5
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 5.9e-06 56.2 37 64.9


User provided reference genes

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