Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016838001 Vitis vinifera HOM05D004267 ORTHO05D005267 5.3e-95 350.9 164 100.0
GSVIVG01016840001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.4e-82 309.7 164 88.4
Prupe.1G415500 Prunus persica HOM05D004267 ORTHO05D005267 1.5e-28 130.2 166 40.4
Cfa017926 Carpinus fangiana HOM05D004267 ORTHO05D005267 1.6e-27 126.7 165 41.8
Haze_18224 Corylus avellana HOM05D004267 ORTHO05D005267 3.6e-27 125.6 165 41.8
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 6.2e-27 124.8 164 39.6
ECA246G5265 Erigeron canadensis HOM05D004267 ORTHO05D005267 8.1e-27 124.4 164 42.1
PGR031G1882 Punica granatum HOM05D004267 ORTHO05D005267 1.1e-26 124.0 164 39.6
TWI34G0953 Tripterygium wilfordii HOM05D004267 ORTHO05D005267 2.3e-26 122.9 165 41.8
Gohir.A05G044300 Gossypium hirsutum HOM05D004267 ORTHO05D005267 4.0e-26 122.1 164 39.6
TAR624G0139 Trochodendron aralioides HOM05D004267 ORTHO05D005267 6.8e-26 121.3 172 39.0
unitig_578.g16576 Utricularia gibba HOM05D004267 ORTHO05D005267 8.9e-26 120.9 164 38.4
Nn8g38967 Nelumbo nucifera HOM05D004267 ORTHO05D005267 1.2e-25 120.6 165 41.2
SalBow4G2144 Salvia bowleyana HOM05D004267 ORTHO05D005267 1.5e-25 120.2 160 40.0
Aqoxy7G03943 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 2.0e-25 119.8 163 39.9
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 2.0e-25 119.8 164 38.4
Gorai.009G047300 Gossypium raimondii HOM05D004267 ORTHO05D005267 3.4e-25 119.0 164 39.0
SGA_v2.0_scaffold88G27217 Striga asiatica HOM05D004267 ORTHO05D005267 7.5e-25 117.9 160 38.1
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 9.9e-25 117.5 165 39.4
Os01g0565600 Oryza sativa ssp. japonica HOM05D004267 ORTHO05D005267 9.9e-25 117.5 155 38.1
Migut.A00159 Erythranthe guttata HOM05D004267 ORTHO05D005267 1.3e-24 117.1 164 36.0
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 1.7e-24 116.7 166 39.8
Ciclev10009729m.g Citrus clementina HOM05D004267 ORTHO05D005267 1.7e-24 116.7 164 39.6
Eucgr.C00632 Eucalyptus grandis HOM05D004267 ORTHO05D005267 1.7e-24 116.7 164 39.6
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 1.7e-24 116.7 165 39.4
ATR0789G016 Amborella trichopoda HOM05D004267 ORTHO05D005267 2.2e-24 116.3 165 38.8
CSS0026627 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D005267 2.9e-24 115.9 164 37.8
CSS0030161 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D000002 2.9e-24 115.9 164 37.8
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 4.9e-24 115.2 165 39.4
Lsat_1_v5_gn_3_28241 Lactuca sativa HOM05D004267 ORTHO05D005267 6.4e-24 114.8 165 37.0
Sc09g0009630 Simmondsia chinensis HOM05D004267 ORTHO05D005267 8.3e-24 114.4 164 37.8
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 8.3e-24 114.4 166 38.6
FAN20G1958 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.1e-23 114.0 166 38.6
QL02p001694 Quercus lobata HOM05D004267 ORTHO05D005267 1.1e-23 114.0 165 38.8
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 1.1e-23 114.0 165 38.8
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 1.1e-23 114.0 165 40.0
Duzib168G1102 Durio zibethinus HOM05D004267 ORTHO05D005267 1.4e-23 113.6 165 39.4
Sed0007787 Sechium edule HOM05D004267 ORTHO05D005267 1.4e-23 113.6 164 39.6
HanXRQChr17g0539351 Helianthus annuus HOM05D004267 ORTHO05D005267 1.9e-23 113.2 164 35.4
PSO210G4696 Papaver somniferum HOM05D004267 ORTHO05D005267 2.4e-23 112.8 164 38.4
PSO210G6502 Papaver somniferum HOM05D004267 ORTHO05D005267 2.4e-23 112.8 164 38.4
CsaV3_2G025720 Cucumis sativus L. HOM05D004267 ORTHO05D005267 3.2e-23 112.5 164 39.6
FAN24G1314 Fragaria x ananassa HOM05D004267 ORTHO05D005267 3.2e-23 112.5 166 38.0
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea HOM05D004267 ORTHO05D005267 4.1e-23 112.1 164 38.4
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 4.1e-23 112.1 166 38.0
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 4.1e-23 112.1 165 38.8
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 5.4e-23 111.7 165 37.0
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 5.4e-23 111.7 165 37.0
Duzib187G0506 Durio zibethinus HOM05D004267 ORTHO05D005267 5.4e-23 111.7 165 38.8
FvH4_2g32280 Fragaria vesca HOM05D004267 ORTHO05D005267 5.4e-23 111.7 166 38.0
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 7.1e-23 111.3 164 37.8
ClCG08G016900 Citrullus lanatus HOM05D004267 ORTHO05D005267 7.1e-23 111.3 164 38.4
Gohir.A06G090500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 7.1e-23 111.3 166 37.3
Gohir.D06G089500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 7.1e-23 111.3 166 37.3
Gorai.010G103400 Gossypium raimondii HOM05D004267 ORTHO05D005267 7.1e-23 111.3 166 37.3
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 7.1e-23 111.3 165 38.2
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 9.2e-23 110.9 164 37.8
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 1.2e-22 110.5 164 37.8
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 1.2e-22 110.5 162 37.7
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 1.2e-22 110.5 165 36.4
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 1.6e-22 110.2 165 37.6
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 2.1e-22 109.8 165 36.4
MD08G1073900 Malus domestica HOM05D004267 ORTHO05D005267 2.1e-22 109.8 175 38.3
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 2.7e-22 109.4 164 36.0
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 2.7e-22 109.4 165 36.4
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 2.7e-22 109.4 165 37.0
Rhsim07G0144100 Rhododendron simsii HOM05D004267 ORTHO05D005267 2.7e-22 109.4 164 36.0
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 3.5e-22 109.0 165 36.4
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 4.6e-22 108.6 165 36.4
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 4.6e-22 108.6 165 36.4
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 4.6e-22 108.6 165 37.0
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 4.6e-22 108.6 165 37.6
RcHm_v2.0_Chr6g0310431 Rosa chinensis HOM05D004267 ORTHO05D005267 4.6e-22 108.6 163 36.8
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 4.6e-22 108.6 165 36.4
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 6.0e-22 108.2 165 36.4
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 6.0e-22 108.2 164 36.0
Thecc.09G050400 Theobroma cacao HOM05D004267 ORTHO05D005267 6.0e-22 108.2 165 38.2
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 1.0e-21 107.5 165 36.4
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 1.0e-21 107.5 158 36.7
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 1.3e-21 107.1 169 38.5
Manes.03G046100 Manihot esculenta HOM05D004267 ORTHO05D005267 1.7e-21 106.7 165 37.6
CANSAT01G0851 Cannabis sativa HOM05D004267 ORTHO05D005267 2.3e-21 106.3 165 37.6
CANSAT01G1320 Cannabis sativa HOM05D004267 ORTHO05D005267 2.3e-21 106.3 165 37.6
FAN15G3631 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.3e-21 106.3 181 37.0
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 2.3e-21 106.3 164 35.4
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 3.9e-21 105.5 121 42.1
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 6.6e-21 104.8 166 38.0
RcHm_v2.0_Chr6g0310421 Rosa chinensis HOM05D004267 ORTHO05D005267 6.6e-21 104.8 161 37.3
Aqoxy408s001 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 8.6e-21 104.4 126 42.1
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 8.6e-21 104.4 165 37.0
Lj8A557T6 Lonicera japonica HOM05D004267 ORTHO05D005267 1.5e-20 103.6 165 35.8
PGSC0003DMG400025516 Solanum tuberosum HOM05D004267 ORTHO05D005267 1.5e-20 103.6 165 37.0
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 1.5e-20 103.6 164 34.1
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 1.9e-20 103.2 173 34.7
Dinv27959 Davidia involucrata HOM05D004267 ORTHO05D005267 3.3e-20 102.4 164 36.0
EL10Ac2g03945 Beta vulgaris HOM05D004267 ORTHO05D005267 5.6e-20 101.7 160 35.0
Solyc11g070050.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 5.6e-20 101.7 165 37.0
Sopen11g028730 Solanum pennellii HOM05D004267 ORTHO05D005267 5.6e-20 101.7 165 37.0
Potri.006G233500 Populus trichocarpa HOM05D004267 ORTHO05D005267 9.5e-20 100.9 160 35.6
SEGI_14756 Sequoiadendron giganteum HOM05D004267 ORTHO05D005267 9.5e-20 100.9 167 35.3
HPP92_004580 Vanilla planifolia HOM05D004267 ORTHO05D005267 9.5e-20 100.9 159 36.5
Hund03363 Selenicereus undatus HOM05D004267 ORTHO05D005267 1.2e-19 100.5 186 34.9
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 2.1e-19 99.8 147 38.1
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 3.6e-19 99.0 129 36.4
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 4.7e-19 98.6 161 33.5
CAN.G309.57 Capsicum annuum HOM05D004267 ORTHO05D005267 6.2e-19 98.2 166 36.1
COL.COLO4_21022 Corchorus olitorius HOM05D004267 ORTHO05D005267 2.4e-18 96.3 184 32.6
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 3.1e-18 95.9 164 34.1
Hund19479 Selenicereus undatus HOM05D004267 ORTHO05D005267 5.2e-18 95.1 174 33.3
Nitab4.5_0021628g0010 Nicotiana tabacum HOM05D004267 ORTHO05D005267 2.6e-17 92.8 165 34.5
Mapoly0044s0101 Marchantia polymorpha HOM05D004267 ORTHO05D005267 3.4e-17 92.4 158 34.2
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea HOM05D004267 ORTHO05D005267 4.4e-17 92.0 200 30.5
FAN15G2319 Fragaria x ananassa HOM05D004267 ORTHO05D005267 9.9e-17 90.9 150 33.3
MBI04_g12184_MAGBIO Magnolia biondii HOM05D004267 ORTHO05D005267 9.9e-17 90.9 186 33.9
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 1.3e-16 90.5 122 37.7
Pp3c5_10040 Physcomitrium patens HOM05D004267 ORTHO05D005267 1.7e-16 90.1 165 33.3
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 1.1e-15 87.4 132 36.4
DCAR_004448 Daucus carota HOM05D004267 ORTHO05D005267 2.4e-15 86.3 165 32.7
DCAR_004449 Daucus carota HOM05D004267 ORTHO05D005267 2.4e-15 86.3 164 34.8
FAN24G0417 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.4e-15 86.3 148 32.4
FAN27G1738 Fragaria x ananassa HOM05D004267 ORTHO05D005267 4.2e-15 85.5 176 31.8
CDE07G0102 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 9.2e-15 84.3 120 40.8
CARHR240940 Cardamine hirsuta HOM05D004267 ORTHO05D005267 1.2e-14 84.0 132 35.6
MELO3C010766.2 Cucumis melo HOM05D004267 ORTHO05D005267 1.6e-14 83.6 131 38.2
CDE07G1388 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 2.7e-14 82.8 102 44.1
Gohir.D05G045900 Gossypium hirsutum HOM05D004267 ORTHO05D005267 7.8e-14 81.3 164 30.5
GSVIVG01022475001 Vitis vinifera HOM05D004267 ORTHO05D438840 1.0e-13 80.9 45 73.3
Sopen11g028740 Solanum pennellii HOM05D004267 ORTHO05D005267 1.1e-10 70.9 146 31.5
Zm00001eb159830 Zea mays HOM05D004267 ORTHO05D005267 1.8e-10 70.1 92 38.0
AUR62040201 Chenopodium quinoa HOM05D004267 ORTHO05D005267 4.0e-10 68.9 132 33.3
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis HOM05D004267 ORTHO05D005267 5.2e-10 68.6 130 31.5
AUR62043052 Chenopodium quinoa HOM05D004267 ORTHO05D005267 6.9e-10 68.2 131 33.6
AUR62009204 Chenopodium quinoa HOM05D004267 ORTHO05D005267 9.0e-10 67.8 132 33.3
Peaxi162Scf00545g00002 Petunia axillaris HOM05D004267 ORTHO05D005267 2.0e-09 66.6 98 33.7
Aqoxy7G03891 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 5.8e-09 65.1 87 36.8
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea HOM05D004267 ORTHO05D005267 6.4e-08 61.6 92 35.9
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea HOM05D004267 ORTHO05D005267 6.4e-08 61.6 92 35.9
Cpa.g.sc78.12 Carica papaya HOM05D004267 ORTHO05D005267 1.9e-07 60.1 93 35.5
Lsat_1_v5_gn_5_67680 Lactuca sativa HOM05D004267 ORTHO05D005267 1.2e-06 57.4 113 30.1
CAN.G1143.36 Capsicum annuum HOM05D001836 ORTHO05D001519 2.7e-06 56.2 57 38.6
Nitab4.5_0001927g0060 Nicotiana tabacum HOM05D004267 ORTHO05D005267 6.0e-06 55.1 118 27.1


User provided reference genes

Program Settings