Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016802001 Vitis vinifera HOM05D003238 ORTHO05D003571 7.4e-33 143.7 94 100.0
TAR624G1148 Trochodendron aralioides HOM05D003238 ORTHO05D003571 9.7e-17 90.1 96 69.8
Manes.11G024400 Manihot esculenta HOM05D003238 ORTHO05D003571 2.2e-16 89.0 92 71.7
Nn6g35523 Nelumbo nucifera HOM05D003238 ORTHO05D003571 9.0e-15 83.6 95 68.4
Cfa003563 Carpinus fangiana HOM05D003238 ORTHO05D003571 1.5e-14 82.8 92 69.6
Dinv37898 Davidia involucrata HOM05D003238 ORTHO05D003571 2.6e-14 82.0 86 72.1
Actinidia39103 Actinidia chinensis HOM05D003238 ORTHO05D003571 1.7e-13 79.3 86 70.9
Ciclev10026836m.g Citrus clementina HOM05D003238 ORTHO05D003571 1.7e-13 79.3 98 66.3
Glyma.07G008200 Glycine max HOM05D003238 ORTHO05D003571 3.8e-13 78.2 88 70.5
TWI79G0340 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 3.8e-13 78.2 92 65.2
Haze_15983 Corylus avellana HOM05D003238 ORTHO05D003571 6.5e-13 77.4 93 68.8
Atru.chr1.3787 Acer truncatum HOM05D003238 ORTHO05D003571 8.5e-13 77.0 96 64.6
QL05p009982 Quercus lobata HOM05D003238 ORTHO05D003571 8.5e-13 77.0 97 63.9
Glyma.08G191200 Glycine max HOM05D003238 ORTHO05D003571 1.1e-12 76.6 88 69.3
Haze_25933 Corylus avellana HOM05D003238 ORTHO05D003571 2.5e-12 75.5 97 61.9
Cc04_g01740 Coffea canephora HOM05D003238 ORTHO05D003571 4.2e-12 74.7 78 74.4
Lj3g0007714 Lotus japonicus HOM05D003238 ORTHO05D003571 4.2e-12 74.7 88 68.2
Sed0015805 Sechium edule HOM05D003238 ORTHO05D003571 5.5e-12 74.3 82 72.0
Cpa.g.sc25.72 Carica papaya HOM05D003238 ORTHO05D003571 9.4e-12 73.6 58 67.2
Lalb_Chr04g0263271 Lupinus albus HOM05D003238 ORTHO05D003571 1.2e-11 73.2 97 63.9
Rhsim08G0235200 Rhododendron simsii HOM05D003238 ORTHO05D003571 1.2e-11 73.2 86 67.4
TPR.G27679 Trifolium pratense HOM05D003238 ORTHO05D003571 1.2e-11 73.2 94 64.9
CiPaw.01G223100 Carya illinoinensis HOM05D003238 ORTHO05D003571 1.6e-11 72.8 87 69.0
MELO3C024380.2 Cucumis melo HOM05D003238 ORTHO05D003571 2.7e-11 72.0 78 73.1
MBI04_g36912_MAGBIO Magnolia biondii HOM05D003238 ORTHO05D003571 3.6e-11 71.6 81 69.1
CsaV3_7G034700 Cucumis sativus L. HOM05D003238 ORTHO05D003571 4.6e-11 71.2 91 63.7
Gohir.D10G059800 Gossypium hirsutum HOM05D003238 ORTHO05D003571 4.6e-11 71.2 88 64.8
Potri.017G119600 Populus trichocarpa HOM05D003238 ORTHO05D003571 4.6e-11 71.2 81 71.6
Hund20825 Selenicereus undatus HOM05D003238 ORTHO05D003571 4.6e-11 71.2 79 73.4
Thecc.06G114200 Theobroma cacao HOM05D003238 ORTHO05D003571 4.6e-11 71.2 88 67.0
arahy.Tifrunner.gnm1.ann1.7T9QNI Arachis hypogaea HOM05D003238 ORTHO05D003571 6.1e-11 70.9 88 64.8
Gorai.011G063800 Gossypium raimondii HOM05D003238 ORTHO05D003571 6.1e-11 70.9 88 64.8
Nitab4.5_0000255g0290 Nicotiana tabacum HOM05D003238 ORTHO05D003571 7.9e-11 70.5 75 74.7
Cfa003064 Carpinus fangiana HOM05D003238 ORTHO05D003571 1.0e-10 70.1 97 60.8
Medtr8g017610 Medicago truncatula HOM05D003238 ORTHO05D003571 1.0e-10 70.1 97 62.9
Phvul.010G137200 Phaseolus vulgaris HOM05D003238 ORTHO05D003571 1.4e-10 69.7 88 67.0
Duzib160G0096 Durio zibethinus HOM05D003238 ORTHO05D003571 1.8e-10 69.3 89 62.9
Gohir.A10G058000 Gossypium hirsutum HOM05D003238 ORTHO05D003571 1.8e-10 69.3 86 65.1
CSS0012761 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 2.3e-10 68.9 89 66.3
CSS0032672 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 2.3e-10 68.9 89 66.3
PGR102G1556 Punica granatum HOM05D003238 ORTHO05D003571 3.0e-10 68.6 88 63.6
Aqoxy7G04029 Aquilegia oxysepala HOM05D003238 ORTHO05D003571 3.9e-10 68.2 95 62.1
CANSAT56G1439 Cannabis sativa HOM05D003238 ORTHO05D003571 3.9e-10 68.2 87 65.5
Dinv36782 Davidia involucrata HOM05D003238 ORTHO05D003571 3.9e-10 68.2 91 61.5
COL.COLO4_30681 Corchorus olitorius HOM05D003238 ORTHO05D003571 5.1e-10 67.8 89 61.8
QL02p062228 Quercus lobata HOM05D003238 ORTHO05D003571 5.1e-10 67.8 96 58.3
MD15G1209800 Malus domestica HOM05D003238 ORTHO05D003571 6.7e-10 67.4 96 58.3
Nitab4.5_0005918g0030 Nicotiana tabacum HOM05D003238 ORTHO05D003571 6.7e-10 67.4 72 75.0
vmacro17137 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 6.7e-10 67.4 90 63.3
Sc15g0000270 Simmondsia chinensis HOM05D003238 ORTHO05D003571 1.1e-09 66.6 83 66.3
Psat4g187480 Pisum sativum HOM05D003238 ORTHO05D003571 1.5e-09 66.2 97 59.8
arahy.Tifrunner.gnm1.ann1.HS5001 Arachis hypogaea HOM05D003238 ORTHO05D003571 2.0e-09 65.9 97 57.7
Hma1.2p1_0169F.1_g074900 Hydrangea macrophylla HOM05D003238 ORTHO05D003571 2.0e-09 65.9 76 71.1
Nitab4.5_0002824g0070 Nicotiana tabacum HOM05D003238 ORTHO05D003571 2.5e-09 65.5 96 60.4
MD02G1082200 Malus domestica HOM05D003238 ORTHO05D003571 3.3e-09 65.1 96 57.3
Rhsim05G0017200 Rhododendron simsii HOM05D003238 ORTHO05D003571 3.3e-09 65.1 87 66.7
Actinidia39710 Actinidia chinensis HOM05D003238 ORTHO05D003571 4.3e-09 64.7 81 69.1
THA.LOC109116473 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 4.3e-09 64.7 88 63.6
Actinidia25242 Actinidia chinensis HOM05D003238 ORTHO05D003571 5.7e-09 64.3 89 64.0
MSTRG.4775 Avicennia marina HOM05D003238 ORTHO05D003571 5.7e-09 64.3 74 51.4
AUR62009849 Chenopodium quinoa HOM05D003238 ORTHO05D003571 5.7e-09 64.3 81 59.3
AT1G72690 Arabidopsis thaliana HOM05D003238 ORTHO05D003571 9.7e-09 63.5 79 67.1
ClCG09G000780 Citrullus lanatus HOM05D003238 ORTHO05D003571 9.7e-09 63.5 78 66.7
FvH4_1g07820 Fragaria vesca HOM05D003238 ORTHO05D003571 1.3e-08 63.2 89 58.4
FAN19G2918 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.3e-08 63.2 89 58.4
DCAR_026391 Daucus carota HOM05D003238 ORTHO05D003571 1.7e-08 62.8 49 67.3
Prupe.7G206700 Prunus persica HOM05D003238 ORTHO05D003571 1.7e-08 62.8 96 58.3
vmacro23045 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 1.7e-08 62.8 56 60.7
Ca_23334_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 2.2e-08 62.4 88 61.4
Nitab4.5_0006462g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 2.2e-08 62.4 58 58.6
Sed0010916 Sechium edule HOM05D003238 ORTHO05D003571 2.2e-08 62.4 82 45.1
Ca_26161_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 2.8e-08 62.0 88 45.5
FAN23G0786 Fragaria x ananassa HOM05D003238 ORTHO05D003571 2.8e-08 62.0 89 60.7
FAN26G0800 Fragaria x ananassa HOM05D003238 ORTHO05D003571 2.8e-08 62.0 89 57.3
Peaxi162Scf00498g00436 Petunia axillaris HOM05D003238 ORTHO05D003571 3.7e-08 61.6 83 62.7
Eucgr.C00871 Eucalyptus grandis HOM05D003238 ORTHO05D003571 4.8e-08 61.2 76 65.8
PSO210G1081 Papaver somniferum HOM05D003238 ORTHO05D003571 4.8e-08 61.2 88 60.2
Solyc12g008950.2 Solanum lycopersicum HOM05D003238 ORTHO05D003571 6.3e-08 60.8 84 60.7
PGSC0003DMG400000275 Solanum tuberosum HOM05D003238 ORTHO05D003571 6.3e-08 60.8 87 58.6
SGA_v2.0_scaffold10G05235 Striga asiatica HOM05D002348 ORTHO05D002512 6.3e-08 60.8 88 40.9
PSO210G2488 Papaver somniferum HOM05D003238 ORTHO05D003571 8.2e-08 60.5 88 60.2
Potri.006G148000 Populus trichocarpa HOM05D003238 ORTHO05D003571 8.2e-08 60.5 98 60.2
HPP92_007657 Vanilla planifolia HOM05D003238 ORTHO05D003571 1.4e-07 59.7 90 58.9
FAN26G1453 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.8e-07 59.3 89 53.9
Potri.004G095300 Populus trichocarpa HOM05D003238 ORTHO05D003571 1.8e-07 59.3 88 42.0
Prupe.3G046400 Prunus persica HOM05D003238 ORTHO05D003571 1.8e-07 59.3 59 54.2
GSVIVG01015179001 Vitis vinifera HOM05D003238 ORTHO05D003571 1.8e-07 59.3 89 62.9
CDE05G2517 Ceratophyllum demersum HOM05D003238 ORTHO05D003571 2.4e-07 58.9 93 54.8
ECA247G2422 Erigeron canadensis HOM05D003238 ORTHO05D003571 2.4e-07 58.9 54 63.0
Glyma.15G170900 Glycine max HOM05D003238 ORTHO05D003571 2.4e-07 58.9 79 44.3
Manes.16G100500 Manihot esculenta HOM05D003238 ORTHO05D003571 2.4e-07 58.9 80 61.2
HPP92_005498 Vanilla planifolia HOM05D003238 ORTHO05D003571 2.4e-07 58.9 51 58.8
CiPaw.03G213000 Carya illinoinensis HOM05D003238 ORTHO05D003571 3.1e-07 58.5 91 56.0
Lj4C292G2 Lonicera japonica HOM05D003238 ORTHO05D003571 3.1e-07 58.5 87 58.6
TWI32G0644 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 3.1e-07 58.5 97 53.6
TWI63G0468 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 3.1e-07 58.5 82 48.8
Lalb_Chr08g0232341 Lupinus albus HOM05D003238 ORTHO05D003571 4.1e-07 58.2 79 46.8
RcHm_v2.0_Chr2g0093691 Rosa chinensis HOM05D003238 ORTHO05D003571 4.1e-07 58.2 89 55.1
Thecc.09G086100 Theobroma cacao HOM05D003238 ORTHO05D003571 4.1e-07 58.2 87 62.1
A09p28910 Brassica napus HOM05D003238 ORTHO05D003571 5.3e-07 57.8 51 56.9
C06p34720 Brassica napus HOM05D003238 ORTHO05D003571 5.3e-07 57.8 51 56.9
BraA09t38454Z Brassica rapa HOM05D003238 ORTHO05D003571 5.3e-07 57.8 51 56.9
CARHR065610 Cardamine hirsuta HOM05D003238 ORTHO05D003571 5.3e-07 57.8 92 57.6
Carub.0002s1954 Capsella rubella HOM05D003238 ORTHO05D003571 6.9e-07 57.4 90 41.1
FAN28G2679 Fragaria x ananassa HOM05D003238 ORTHO05D003571 9.1e-07 57.0 89 56.2
Oeu017609.1 Olea europaea HOM05D003238 ORTHO05D003571 9.1e-07 57.0 83 62.7
Sopen12g003880 Solanum pennellii HOM05D003238 ORTHO05D003571 9.1e-07 57.0 96 53.1
FAN14G3690 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.2e-06 56.6 75 49.3
Sopen06g022220 Solanum pennellii HOM05D003238 ORTHO05D003571 1.2e-06 56.6 72 69.4
Thhalv10019375m.g Eutrema salsugineum HOM05D003238 ORTHO05D003571 1.5e-06 56.2 50 58.0
HanXRQChr02g0031751 Helianthus annuus HOM05D003238 ORTHO05D003571 2.0e-06 55.8 84 45.2
Aa31LG4G3050 Aethionema arabicum HOM05D003238 ORTHO05D003571 2.6e-06 55.5 81 59.3
AL2G32370 Arabidopsis lyrata HOM05D003238 ORTHO05D003571 2.6e-06 55.5 79 60.8
EL10Ac7g16367 Beta vulgaris HOM05D003238 ORTHO05D003571 2.6e-06 55.5 45 64.4
FvH4_6g33970 Fragaria vesca HOM05D003238 ORTHO05D003571 2.6e-06 55.5 75 49.3
FAN05G5076 Fragaria x ananassa HOM05D003238 ORTHO05D003571 2.6e-06 55.5 75 49.3
FAN09G2388 Fragaria x ananassa HOM05D003238 ORTHO05D003571 2.6e-06 55.5 75 49.3
Sp5g27750 Schrenkiella parvula HOM05D003238 ORTHO05D003571 3.4e-06 55.1 50 58.0
Migut.J00580 Erythranthe guttata HOM05D003238 ORTHO05D003571 4.5e-06 54.7 79 43.0
Medtr2g039890 Medicago truncatula HOM05D003238 ORTHO05D003571 4.5e-06 54.7 81 44.4
Atru.chr7.1621 Acer truncatum HOM05D003238 ORTHO05D003571 5.9e-06 54.3 58 53.4
VMungo0720G2789 Vigna mungo HOM05D003238 ORTHO05D003571 5.9e-06 54.3 50 56.0
ATR0789G083 Amborella trichopoda HOM05D003238 ORTHO05D003571 7.7e-06 53.9 69 66.7
Solyc06g062765.1 Solanum lycopersicum HOM05D003238 ORTHO05D003571 7.7e-06 53.9 72 68.1


User provided reference genes

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