Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016774001 Vitis vinifera HOM05D006979 ORTHO05D008857 3.9e-168 594.7 304 100.0
TAR383G0452 Trochodendron aralioides HOM05D006979 ORTHO05D008857 1.8e-120 436.4 307 74.3
Prupe.3G042700 Prunus persica HOM05D006979 ORTHO05D008857 6.1e-113 411.4 305 70.2
CSS0018635 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 4.0e-112 408.7 296 72.6
CSS0026622 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 6.8e-112 407.9 298 72.5
Ciclev10026147m.g Citrus clementina HOM05D006979 ORTHO05D008857 1.2e-111 407.1 289 71.3
Rhsim08G0237900 Rhododendron simsii HOM05D006979 ORTHO05D008857 1.3e-110 403.7 306 67.3
Actinidia32181 Actinidia chinensis HOM05D006979 ORTHO05D008857 2.4e-109 399.4 297 71.4
Potri.003G063800 Populus trichocarpa HOM05D006979 ORTHO05D008857 9.1e-109 397.5 292 69.9
Cfa003539 Carpinus fangiana HOM05D006979 ORTHO05D008857 1.2e-108 397.1 291 72.5
Dinv04035 Davidia involucrata HOM05D006979 ORTHO05D008857 1.2e-108 397.1 282 71.6
Atru.chr1.3953 Acer truncatum HOM05D006979 ORTHO05D008857 2.0e-108 396.4 290 70.3
vmacro15023 Vaccinium macrocarpon HOM05D006979 ORTHO05D008857 4.5e-108 395.2 304 67.4
Nitab4.5_0001199g0130 Nicotiana tabacum HOM05D006979 ORTHO05D008857 3.8e-107 392.1 275 70.9
Nitab4.5_0000189g0250 Nicotiana tabacum HOM05D006979 ORTHO05D008857 5.0e-107 391.7 275 70.9
FvH4_6g34590 Fragaria vesca HOM05D006979 ORTHO05D008857 8.6e-107 391.0 260 74.6
FAN09G4734 Fragaria x ananassa HOM05D006979 ORTHO05D008857 8.6e-107 391.0 260 74.6
Manes.11G021300 Manihot esculenta HOM05D006979 ORTHO05D008857 4.2e-106 388.7 290 67.9
MD09G1184500 Malus domestica HOM05D006979 ORTHO05D008857 5.5e-106 388.3 292 69.9
RcHm_v2.0_Chr2g0145111 Rosa chinensis HOM05D006979 ORTHO05D008857 9.5e-106 387.5 261 73.9
CiPaw.01G219600 Carya illinoinensis HOM05D006979 ORTHO05D008857 1.2e-105 387.1 255 76.1
Thecc.06G118900 Theobroma cacao HOM05D006979 ORTHO05D008857 2.1e-105 386.3 306 66.3
CAN.G1368.7 Capsicum annuum HOM05D006979 ORTHO05D008857 1.4e-104 383.6 261 72.0
Glyma.16G005300 Glycine max HOM05D006979 ORTHO05D008857 1.4e-104 383.6 309 62.5
Phvul.010G133500 Phaseolus vulgaris HOM05D006979 ORTHO05D008857 3.0e-104 382.5 267 69.3
COL.COLO4_30769 Corchorus olitorius HOM05D006979 ORTHO05D008857 6.8e-104 381.3 305 66.2
QL05p008051 Quercus lobata HOM05D006979 ORTHO05D008857 8.9e-104 380.9 343 60.1
Sabra03G0037400 Salix brachista HOM05D006979 ORTHO05D008857 1.2e-103 380.6 299 65.9
CANSAT56G2284 Cannabis sativa HOM05D006979 ORTHO05D008857 2.6e-103 379.4 265 71.7
Glyma.07G036000 Glycine max HOM05D006979 ORTHO05D008857 2.6e-103 379.4 302 64.9
Cpa.g.sc25.110 Carica papaya HOM05D006979 ORTHO05D008857 7.5e-103 377.9 290 67.2
AUR62001490 Chenopodium quinoa HOM05D006979 ORTHO05D008857 9.8e-103 377.5 298 64.8
Duzib235G1224 Durio zibethinus HOM05D006979 ORTHO05D008857 1.3e-102 377.1 277 69.0
Gorai.009G146700 Gossypium raimondii HOM05D006979 ORTHO05D008857 1.3e-102 377.1 305 64.6
PGSC0003DMG400011606 Solanum tuberosum HOM05D006979 ORTHO05D008857 1.7e-102 376.7 261 70.9
Sed0019772 Sechium edule HOM05D006979 ORTHO05D008857 2.8e-102 375.9 260 71.2
Gohir.D05G142800 Gossypium hirsutum HOM05D006979 ORTHO05D008857 4.9e-102 375.2 305 64.3
TWI31G0112 Tripterygium wilfordii HOM05D006979 ORTHO05D008857 1.4e-101 373.6 308 64.9
AUR62009880 Chenopodium quinoa HOM05D006979 ORTHO05D008857 2.4e-101 372.9 299 64.5
Oeu015481.1 Olea europaea HOM05D006979 ORTHO05D008857 3.2e-101 372.5 300 64.7
Lj3g0022239 Lotus japonicus HOM05D006979 ORTHO05D008857 4.1e-101 372.1 264 70.1
Sopen12g023760 Solanum pennellii HOM05D006979 ORTHO05D008857 7.0e-101 371.3 261 70.5
Lalb_Chr04g0263421 Lupinus albus HOM05D006979 ORTHO05D008857 9.2e-101 370.9 288 68.4
MBI19_g11849_MAGBIO Magnolia biondii HOM05D006979 ORTHO05D008857 9.2e-101 370.9 283 69.6
Medtr8g019510 Medicago truncatula HOM05D006979 ORTHO05D008857 1.2e-100 370.5 281 67.3
Migut.D00941 Erythranthe guttata HOM05D006979 ORTHO05D008857 1.3e-99 367.1 265 69.4
Lj9A522T69 Lonicera japonica HOM05D006979 ORTHO05D008857 3.9e-99 365.5 252 73.8
VMungo0331G0985 Vigna mungo HOM05D006979 ORTHO05D008857 1.1e-98 364.0 278 63.7
TPR.G16442 Trifolium pratense HOM05D006979 ORTHO05D008857 1.5e-98 363.6 261 69.0
PSO210G4684 Papaver somniferum HOM05D006979 ORTHO05D008857 7.3e-98 361.3 308 64.3
SalBow7G2243 Salvia bowleyana HOM05D006979 ORTHO05D008857 7.3e-98 361.3 300 62.7
Aqoxy5G02291 Aquilegia oxysepala HOM05D006979 ORTHO05D008857 1.6e-97 360.1 295 62.4
Solyc12g049280.3 Solanum lycopersicum HOM05D006979 ORTHO05D008857 6.1e-97 358.2 248 71.4
Peaxi162Scf00177g00513 Petunia axillaris HOM05D006979 ORTHO05D008857 8.0e-97 357.8 261 69.3
Hund05741 Selenicereus undatus HOM05D006979 ORTHO05D008857 2.3e-96 356.3 337 57.6
FAN05G0457 Fragaria x ananassa HOM05D006979 ORTHO05D008857 3.1e-96 355.9 267 69.7
Atru.chr1.3954 Acer truncatum HOM05D006979 ORTHO05D008857 1.2e-95 354.0 246 73.2
SGA_v2.0_scaffold4G02061 Striga asiatica HOM05D006979 ORTHO05D008857 1.2e-95 354.0 262 67.6
Lsat_1_v5_gn_5_135940 Lactuca sativa HOM05D006979 ORTHO05D008857 4.4e-95 352.1 262 66.8
THA.LOC104813956 Tarenaya hassleriana HOM05D006979 ORTHO05D008857 4.4e-95 352.1 299 63.2
CsaV3_7G034520 Cucumis sativus L. HOM05D006979 ORTHO05D008857 5.8e-95 351.7 279 64.9
Eucgr.F03173 Eucalyptus grandis HOM05D006979 ORTHO05D008857 1.3e-94 350.5 283 63.3
PSO210G5065 Papaver somniferum HOM05D006979 ORTHO05D008857 1.3e-94 350.5 279 65.9
CDE05G0714 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 6.4e-94 348.2 254 65.7
ClCG09G000940 Citrullus lanatus HOM05D006979 ORTHO05D008857 8.3e-94 347.8 321 57.3
ECA234G1570 Erigeron canadensis HOM05D006979 ORTHO05D008857 4.1e-93 345.5 261 65.5
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 1.2e-92 344.0 262 66.4
Os03g0410700 Oryza sativa ssp. japonica HOM05D006979 ORTHO05D008857 4.6e-92 342.0 249 67.5
Sc08g0005680 Simmondsia chinensis HOM05D006979 ORTHO05D008857 8.6e-91 337.8 296 60.8
BcaNung07150 Brassica carinata HOM05D006979 ORTHO05D008857 1.1e-90 337.4 293 60.4
Haze_16022 Corylus avellana HOM05D006979 ORTHO05D008857 1.5e-90 337.0 294 63.9
Gohir.A05G140600 Gossypium hirsutum HOM05D006979 ORTHO05D008857 2.6e-87 326.2 305 58.7
Sp5g27700 Schrenkiella parvula HOM05D006979 ORTHO05D008857 3.4e-87 325.9 303 56.4
Carub.0002s1948 Capsella rubella HOM05D006979 ORTHO05D008857 9.8e-87 324.3 303 57.4
ATR0598G212 Amborella trichopoda HOM05D006979 ORTHO05D008857 1.7e-86 323.6 272 62.1
PGR119G0938 Punica granatum HOM05D006979 ORTHO05D008857 1.4e-85 320.5 266 62.8
A07p38800 Brassica napus HOM05D006979 ORTHO05D008857 2.4e-85 319.7 334 53.6
BraA07t31434Z Brassica rapa HOM05D006979 ORTHO05D008857 2.4e-85 319.7 334 53.6
Cc04_g01400 Coffea canephora HOM05D006979 ORTHO05D008857 3.2e-85 319.3 240 68.8
C06p46960 Brassica napus HOM05D006979 ORTHO05D008857 5.4e-85 318.5 312 55.1
BolC6t39737H Brassica oleracea HOM05D006979 ORTHO05D008857 5.4e-85 318.5 312 55.1
AL2G32310 Arabidopsis lyrata HOM05D006979 ORTHO05D008857 2.7e-84 316.2 270 58.9
BcaC08g46707 Brassica carinata HOM05D006979 ORTHO05D008857 4.6e-84 315.5 308 55.5
Nn6g35601 Nelumbo nucifera HOM05D006979 ORTHO05D008857 2.3e-83 313.2 296 57.4
Aa31LG4G3010 Aethionema arabicum HOM05D006979 ORTHO05D008857 3.9e-83 312.4 293 58.4
Thhalv10018914m.g Eutrema salsugineum HOM05D006979 ORTHO05D008857 3.9e-83 312.4 270 59.3
arahy.Tifrunner.gnm1.ann1.4E7AR5 Arachis hypogaea HOM05D006979 ORTHO05D008857 1.5e-79 300.4 289 56.7
arahy.Tifrunner.gnm1.ann1.IV001U Arachis hypogaea HOM05D006979 ORTHO05D008857 1.3e-78 297.4 289 56.4
Ca_05018_v3 Cicer arietinum L. HOM05D006979 ORTHO05D008857 2.0e-71 273.5 199 65.8
Psat4g183680 Pisum sativum HOM05D006979 ORTHO05D008857 2.9e-70 269.6 204 65.2
Pp3c11_2100 Physcomitrium patens HOM05D006979 ORTHO05D008857 3.8e-70 269.2 252 53.6
Zm00001eb019720 Zea mays HOM05D006979 ORTHO05D008857 2.4e-69 266.5 215 64.7
AT1G72640 Arabidopsis thaliana HOM05D006979 ORTHO05D008857 8.7e-67 258.1 210 61.9
EL10Ac7g16405 Beta vulgaris HOM05D006979 ORTHO05D008857 1.5e-66 257.3 303 51.8
Hma1.2p1_0496F.1_g166210 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 1.9e-66 256.9 170 74.7
FAN14G3231 Fragaria x ananassa HOM05D006979 ORTHO05D008857 1.5e-58 230.7 160 69.4
Hma1.2p1_0496F.1_g166200 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 4.3e-58 229.2 209 61.7
CARHR065560 Cardamine hirsuta HOM05D006979 ORTHO05D008857 2.1e-57 226.9 181 61.3
AagrBONN_evm.TU.Sc2ySwM_362.1497 Anthoceros agrestis HOM05D006979 ORTHO05D008857 4.2e-53 212.6 200 55.0
MELO3C024358.2 Cucumis melo HOM05D006979 ORTHO05D008857 7.9e-52 208.4 162 66.7
SMO117G0249 Selaginella moellendorffii HOM05D006979 ORTHO05D008857 4.3e-50 202.6 258 42.6
Ah.08g216750 Amaranthus hybridus HOM05D006979 ORTHO05D008857 2.4e-40 170.2 146 62.3
SEGI_25115 Sequoiadendron giganteum HOM05D006979 ORTHO05D008857 1.6e-36 157.5 136 55.9
Mapoly0030s0153 Marchantia polymorpha HOM05D006979 ORTHO05D008857 4.5e-31 139.4 150 49.3
CDE05G2075 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 4.5e-23 112.8 192 37.5
Cre02.g095133 Chlamydomonas reinhardtii HOM05D006979 ORTHO05D008857 1.2e-20 104.8 243 34.6
MCO12G160 Micromonas commoda HOM05D006979 ORTHO05D008857 2.3e-19 100.5 277 31.8
Medtr8g019490 Medicago truncatula HOM05D006979 ORTHO05D008857 1.4e-16 91.3 99 46.5
RcHm_v2.0_Chr6g0307231 Rosa chinensis HOM05D006979 ORTHO05D008857 1.7e-14 84.3 56 71.4
RcHm_v2.0_Chr3g0497381 Rosa chinensis HOM05D006979 ORTHO05D008857 1.9e-13 80.9 56 67.9
PRCOL_00001479 Prasinoderma coloniale HOM05D006979 ORTHO05D008857 3.2e-13 80.1 228 28.9
Lsat_1_v5_gn_1_77640 Lactuca sativa HOM05D006655 ORTHO05D007986 1.1e-08 65.1 245 25.7
ECA248G0748 Erigeron canadensis HOM05D006655 ORTHO05D007986 4.1e-08 63.2 250 24.0
Actinidia06937 Actinidia chinensis HOM05D006655 ORTHO05D007986 9.1e-08 62.0 270 24.8
Cpa.g.sc84.14 Carica papaya HOM05D006655 ORTHO05D007986 1.2e-07 61.6 270 23.7
MD03G1169200 Malus domestica HOM05D006655 ORTHO05D007986 2.0e-07 60.8 263 24.3
Zm00001eb394530 Zea mays HOM05D006655 ORTHO05D007986 2.0e-07 60.8 245 24.1
CiPaw.09G194500 Carya illinoinensis HOM05D003730 ORTHO05D004458 2.7e-07 60.5 122 33.6
Mapoly0030s0154 Marchantia polymorpha HOM05D006979 ORTHO05D008857 3.5e-07 60.1 54 46.3
GSVIVG01034152001 Vitis vinifera HOM05D003730 ORTHO05D004458 4.5e-07 59.7 122 32.8
PSO063G2886 Papaver somniferum HOM05D003730 ORTHO05D004458 5.9e-07 59.3 122 33.6
SEGI_01007 Sequoiadendron giganteum HOM05D006655 ORTHO05D007986 5.9e-07 59.3 258 24.0
PSO339G5717 Papaver somniferum HOM05D003730 ORTHO05D004458 7.7e-07 58.9 122 32.8
PSO541G3402 Papaver somniferum HOM05D003730 ORTHO05D004458 7.7e-07 58.9 121 31.4
Ciclev10015876m.g Citrus clementina HOM05D006655 ORTHO05D007986 1.0e-06 58.5 249 24.5
Glyma.07G133200 Glycine max HOM05D003730 ORTHO05D004458 1.0e-06 58.5 122 32.8
VMungo1383G3507 Vigna mungo HOM05D003730 ORTHO05D004458 1.0e-06 58.5 122 32.8
AUR62000173 Chenopodium quinoa HOM05D006655 ORTHO05D007986 1.3e-06 58.2 245 24.1
Hund21967 Selenicereus undatus HOM05D006655 ORTHO05D007986 1.3e-06 58.2 282 22.0
Cfa009833 Carpinus fangiana HOM05D006655 ORTHO05D007986 1.7e-06 57.8 288 22.9
AUR62039838 Chenopodium quinoa HOM05D006655 ORTHO05D007986 1.7e-06 57.8 245 24.1
Thhalv10025684m.g Eutrema salsugineum HOM05D006655 ORTHO05D007986 1.7e-06 57.8 271 23.6
FvH4_3g28150 Fragaria vesca HOM05D006655 ORTHO05D007986 1.7e-06 57.8 245 23.7
FAN11G1204 Fragaria x ananassa HOM05D006655 ORTHO05D007986 1.7e-06 57.8 245 23.7
Cc01_g05880 Coffea canephora HOM05D006655 ORTHO05D007986 2.2e-06 57.4 273 23.8
RcHm_v2.0_Chr5g0050831 Rosa chinensis HOM05D006655 ORTHO05D007986 2.2e-06 57.4 257 23.0
THA.LOC104816930 Tarenaya hassleriana HOM05D006655 ORTHO05D007986 2.2e-06 57.4 249 24.1
AT4G31530 Arabidopsis thaliana HOM05D006655 ORTHO05D007986 2.9e-06 57.0 273 23.1
COL.COLO4_04115 Corchorus olitorius HOM05D006655 ORTHO05D007986 2.9e-06 57.0 244 23.8
Oeu010095.1 Olea europaea HOM05D003730 ORTHO05D004458 2.9e-06 57.0 122 32.0
Rhsim13G0216500 Rhododendron simsii HOM05D006655 ORTHO05D007986 2.9e-06 57.0 245 24.5
arahy.Tifrunner.gnm1.ann1.E6NKCB Arachis hypogaea HOM05D003730 ORTHO05D004458 3.8e-06 56.6 125 31.2
arahy.Tifrunner.gnm1.ann1.L41CIL Arachis hypogaea HOM05D003730 ORTHO05D004458 3.8e-06 56.6 125 31.2
MSTRG.18452 Avicennia marina HOM05D006655 ORTHO05D007986 3.8e-06 56.6 250 23.6
EL10Ac4g10174 Beta vulgaris HOM05D006655 ORTHO05D007986 3.8e-06 56.6 270 23.0
CARHR239410 Cardamine hirsuta HOM05D006655 ORTHO05D007986 3.8e-06 56.6 272 22.8
Haze_23196 Corylus avellana HOM05D006655 ORTHO05D007986 3.8e-06 56.6 270 23.0
RcHm_v2.0_Chr5g0011641 Rosa chinensis HOM05D005310 ORTHO05D006920 3.8e-06 56.6 89 38.2
TAR636G1862 Trochodendron aralioides HOM05D003730 ORTHO05D004458 3.8e-06 56.6 123 31.7
AL7G20510 Arabidopsis lyrata HOM05D006655 ORTHO05D007986 5.0e-06 56.2 273 22.7
Manes.09G092700 Manihot esculenta HOM05D003730 ORTHO05D004458 5.0e-06 56.2 123 31.7
PSO063G2117 Papaver somniferum HOM05D003730 ORTHO05D004458 5.0e-06 56.2 121 30.6
Atru.chr8.1989 Acer truncatum HOM05D003730 ORTHO05D004458 6.5e-06 55.8 122 31.1
Aa31LG2G18820 Aethionema arabicum HOM05D006655 ORTHO05D007986 6.5e-06 55.8 260 23.5
BcaNung04132 Brassica carinata HOM05D006655 ORTHO05D007986 6.5e-06 55.8 273 22.7
Ca_07559_v3 Cicer arietinum L. HOM05D003730 ORTHO05D004458 6.5e-06 55.8 122 32.0
Cc06_g02520 Coffea canephora HOM05D003730 ORTHO05D004458 6.5e-06 55.8 216 25.9
Dinv36200 Davidia involucrata HOM05D006655 ORTHO05D007986 6.5e-06 55.8 263 22.4
FAN16G3233 Fragaria x ananassa HOM05D006655 ORTHO05D007986 6.5e-06 55.8 245 23.3
HanXRQChr01g0023951 Helianthus annuus HOM05D006655 ORTHO05D007986 6.5e-06 55.8 246 23.6
MD00G1009300 Malus domestica HOM05D005310 ORTHO05D006920 6.5e-06 55.8 68 42.6
MD05G1295400 Malus domestica HOM05D005310 ORTHO05D006920 6.5e-06 55.8 68 42.6
PSO339G0047 Papaver somniferum HOM05D003730 ORTHO05D004458 6.5e-06 55.8 121 30.6
RcHm_v2.0_Chr2g0109871 Rosa chinensis HOM05D005310 ORTHO05D006920 6.5e-06 55.8 68 42.6
Sp7g29360 Schrenkiella parvula HOM05D006655 ORTHO05D007986 6.5e-06 55.8 264 22.3
arahy.Tifrunner.gnm1.ann1.D1PGNE Arachis hypogaea HOM05D003730 ORTHO05D004458 8.5e-06 55.5 122 31.1
C07p58710 Brassica napus HOM05D006655 ORTHO05D007986 8.5e-06 55.5 264 22.7
FvH4_3g07310 Fragaria vesca HOM05D005310 ORTHO05D006920 8.5e-06 55.5 89 37.1
FAN11G0629 Fragaria x ananassa HOM05D005310 ORTHO05D006920 8.5e-06 55.5 89 37.1
FAN16G3592 Fragaria x ananassa HOM05D005310 ORTHO05D006920 8.5e-06 55.5 89 37.1
FAN21G2773 Fragaria x ananassa HOM05D005310 ORTHO05D006920 8.5e-06 55.5 89 37.1
FAN25G3188 Fragaria x ananassa HOM05D005310 ORTHO05D006920 8.5e-06 55.5 89 37.1
Gohir.A09G111300 Gossypium hirsutum HOM05D006655 ORTHO05D007986 8.5e-06 55.5 235 23.0
Gohir.A09G155032 Gossypium hirsutum HOM05D003730 ORTHO05D004458 8.5e-06 55.5 122 31.1
Gohir.D09G150600 Gossypium hirsutum HOM05D003730 ORTHO05D004458 8.5e-06 55.5 122 31.1
Gorai.006G171900 Gossypium raimondii HOM05D003730 ORTHO05D004458 8.5e-06 55.5 122 31.1
HanXRQChr01g0003071 Helianthus annuus HOM05D003730 ORTHO05D004458 8.5e-06 55.5 129 29.5
Hma1.2p1_0936F.1_g238830 Hydrangea macrophylla HOM05D003730 ORTHO05D004458 8.5e-06 55.5 125 31.2
Manes.08G088900 Manihot esculenta HOM05D003730 ORTHO05D004458 8.5e-06 55.5 122 31.1
Phvul.008G119600 Phaseolus vulgaris HOM05D003730 ORTHO05D004458 8.5e-06 55.5 122 31.1
RcHm_v2.0_Chr3g0466371 Rosa chinensis HOM05D003730 ORTHO05D004458 8.5e-06 55.5 122 32.0


User provided reference genes

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