Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 1.2e-55 219.5 111 100.0
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 8.4e-44 180.3 111 81.1
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 3.2e-43 178.3 111 79.3
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 1.2e-42 176.4 111 79.3
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 1.2e-42 176.4 111 80.2
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 6.0e-42 174.1 111 75.7
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 1.3e-41 172.9 111 76.6
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 2.3e-41 172.2 109 78.0
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 3.0e-41 171.8 112 77.7
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 3.0e-41 171.8 111 74.8
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 3.0e-41 171.8 114 77.2
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 5.1e-41 171.0 111 76.6
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 6.6e-41 170.6 111 75.7
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 8.7e-41 170.2 111 75.7
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 1.1e-40 169.9 111 76.6
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 1.5e-40 169.5 109 78.0
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 1.5e-40 169.5 112 76.8
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 5.6e-40 167.5 109 72.5
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 7.3e-40 167.2 107 78.5
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 9.6e-40 166.8 109 75.2
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 9.6e-40 166.8 108 75.9
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 2.1e-39 165.6 100 81.0
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.1e-39 165.6 111 72.1
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 2.1e-39 165.6 111 71.2
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 6.2e-39 164.1 109 78.0
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 6.2e-39 164.1 112 74.1
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 6.2e-39 164.1 111 73.9
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 1.1e-38 163.3 109 74.3
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 1.8e-38 162.5 111 74.8
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 1.8e-38 162.5 109 72.5
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 2.4e-38 162.2 111 72.1
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 2.4e-38 162.2 112 72.3
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 3.1e-38 161.8 109 73.4
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 4.0e-38 161.4 111 72.1
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 4.0e-38 161.4 112 71.4
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 6.9e-38 160.6 106 72.6
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 9.0e-38 160.2 109 73.4
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 9.0e-38 160.2 108 72.2
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 9.0e-38 160.2 111 70.3
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 1.5e-37 159.5 111 73.0
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 1.5e-37 159.5 112 73.2
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 4.5e-37 157.9 111 69.4
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 4.5e-37 157.9 111 72.1
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 4.5e-37 157.9 111 69.4
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 4.5e-37 157.9 111 70.3
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 7.6e-37 157.1 109 72.5
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 7.6e-37 157.1 109 72.5
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 9.9e-37 156.8 109 67.9
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 1.3e-36 156.4 111 70.3
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 1.3e-36 156.4 108 72.2
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 1.7e-36 156.0 109 70.6
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 2.2e-36 155.6 110 70.9
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 2.9e-36 155.2 109 70.6
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 1.1e-35 153.3 111 68.5
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 1.1e-35 153.3 109 66.1
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 1.1e-35 153.3 109 67.0
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 1.9e-35 152.5 109 72.5
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 1.9e-35 152.5 111 66.7
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 3.2e-35 151.8 111 68.5
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 4.2e-35 151.4 139 61.9
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 5.4e-35 151.0 113 66.4
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 5.4e-35 151.0 111 64.9
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 9.3e-35 150.2 130 61.5
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 9.3e-35 150.2 111 67.6
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 1.6e-34 149.4 111 70.3
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 3.5e-34 148.3 109 67.9
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 3.5e-34 148.3 113 69.0
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 3.5e-34 148.3 104 70.2
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 4.6e-34 147.9 114 70.2
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 6.0e-34 147.5 112 69.6
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 1.9e-32 142.5 99 71.7
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 2.5e-32 142.1 102 69.6
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 3.3e-32 141.7 113 65.5
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 3.3e-32 141.7 113 65.5
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 5.6e-32 141.0 106 67.0
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 9.6e-32 140.2 101 69.3
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 1.3e-31 139.8 110 62.7
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 1.3e-31 139.8 111 63.1
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 1.3e-31 139.8 111 62.2
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 1.6e-31 139.4 106 63.2
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 1.6e-31 139.4 111 65.8
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 2.1e-31 139.0 106 66.0
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 2.8e-31 138.7 111 62.2
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 3.7e-31 138.3 104 69.2
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 4.8e-31 137.9 99 70.7
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 8.1e-31 137.1 95 71.6
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 8.1e-31 137.1 104 65.4
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 8.1e-31 137.1 111 64.0
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 1.1e-30 136.7 111 64.0
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 1.4e-30 136.3 111 60.4
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.4e-30 136.3 110 64.5
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 1.8e-30 136.0 102 66.7
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 1.8e-30 136.0 99 69.7
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 3.1e-30 135.2 105 62.9
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 3.1e-30 135.2 111 62.2
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 3.1e-30 135.2 111 62.2
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 4.0e-30 134.8 111 62.2
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 5.3e-30 134.4 111 63.1
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 6.9e-30 134.0 110 60.0
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 2.6e-29 132.1 109 60.6
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 3.4e-29 131.7 111 58.6
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 3.4e-29 131.7 104 61.5
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 1.7e-28 129.4 110 57.3
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 1.7e-28 129.4 105 61.0
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 3.8e-28 128.3 105 60.0
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 4.9e-28 127.9 102 64.7
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 4.9e-28 127.9 102 64.7
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 6.4e-28 127.5 105 60.0
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 6.4e-28 127.5 105 60.0
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 6.4e-28 127.5 105 60.0
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 8.4e-28 127.1 109 57.8
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 1.1e-27 126.7 104 58.7
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.4e-27 126.3 102 63.7
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.4e-27 126.3 102 63.7
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 1.2e-26 123.2 104 61.5
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 4.6e-26 121.3 99 60.6
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 6.0e-26 120.9 104 60.6
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 3.3e-24 115.2 104 61.5
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 1.3e-23 113.2 104 57.7
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 2.8e-23 112.1 111 55.9
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 4.5e-21 104.8 76 65.8
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 3.8e-20 101.7 74 66.2
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 6.5e-20 100.9 83 60.2
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 8.4e-20 100.5 101 48.5
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 3.5e-18 95.1 58 75.9
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 4.6e-18 94.7 98 52.0
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 1.3e-17 93.2 102 45.1
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 1.8e-17 92.8 74 63.5
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 2.3e-17 92.4 73 61.6
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 2.4e-14 82.4 99 42.4
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 4.1e-14 81.6 117 47.0
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 2.2e-12 75.9 65 58.5
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.9e-11 72.8 73 49.3
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 5.5e-11 71.2 74 47.3
ClCG08G001190 Citrullus lanatus HOM05D005755 ORTHO05D007006 1.0e-09 67.0 59 55.9
SEGI_15077 Sequoiadendron giganteum HOM05D002017 ORTHO05D007006 1.8e-09 66.2 65 52.3
CBR_g23899 Chara braunii HOM05D005755 ORTHO05D007006 8.2e-07 57.4 103 32.0


User provided reference genes

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