Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016280001 Vitis vinifera HOM05D000286 ORTHO05D000170 2.2e-38 161.8 78 100.0
vmacro04874 Vaccinium macrocarpon HOM05D000286 ORTHO05D000170 2.2e-30 135.2 71 84.5
Rhsim09G0152100 Rhododendron simsii HOM05D000286 ORTHO05D000170 3.7e-30 134.4 71 84.5
CiPaw.02G174100 Carya illinoinensis HOM05D000286 ORTHO05D000170 4.1e-29 131.0 71 84.5
CiPaw.01G273000 Carya illinoinensis HOM05D000286 ORTHO05D000170 9.1e-29 129.8 71 78.9
Actinidia03064 Actinidia chinensis HOM05D000286 ORTHO05D000170 2.0e-28 128.6 71 81.7
VMungo0720G2421 Vigna mungo HOM05D000286 ORTHO05D000170 2.0e-28 128.6 71 80.3
PSO339G3832 Papaver somniferum HOM05D000286 ORTHO05D000170 2.7e-28 128.3 69 82.6
Potri.008G040000 Populus trichocarpa HOM05D000286 ORTHO05D000170 2.7e-28 128.3 69 84.1
Atru.chr12.750 Acer truncatum HOM05D000286 ORTHO05D000170 4.5e-28 127.5 69 82.6
Aqoxy2G01631 Aquilegia oxysepala HOM05D000286 ORTHO05D000170 4.5e-28 127.5 71 78.9
Atru.chr12.775 Acer truncatum HOM05D000286 ORTHO05D000170 5.9e-28 127.1 69 81.2
PSO384G3038 Papaver somniferum HOM05D000286 ORTHO05D000170 5.9e-28 127.1 70 82.9
Psat6g204840 Pisum sativum HOM05D000286 ORTHO05D000170 5.9e-28 127.1 71 78.9
Potri.010G222300 Populus trichocarpa HOM05D000286 ORTHO05D000170 5.9e-28 127.1 69 84.1
PSO384G2161 Papaver somniferum HOM05D000286 ORTHO05D000170 7.7e-28 126.7 69 81.2
Hma1.2p1_0301F.1_g118510 Hydrangea macrophylla HOM05D000286 ORTHO05D000170 1.7e-27 125.6 71 80.3
QL08p056010 Quercus lobata HOM05D000286 ORTHO05D000170 1.7e-27 125.6 69 81.2
Sabra10G0171900 Salix brachista HOM05D000286 ORTHO05D000170 1.7e-27 125.6 69 82.6
Phvul.007G094400 Phaseolus vulgaris HOM05D000286 ORTHO05D000170 2.2e-27 125.2 71 77.5
Medtr1g095110 Medicago truncatula HOM05D000286 ORTHO05D000170 2.9e-27 124.8 71 77.5
Lj1A914T38 Lonicera japonica HOM05D000286 ORTHO05D000170 3.8e-27 124.4 71 77.5
ECA232G3896 Erigeron canadensis HOM05D000286 ORTHO05D000170 5.0e-27 124.0 71 73.2
Lalb_Chr06g0162291 Lupinus albus HOM05D000286 ORTHO05D000170 6.5e-27 123.6 71 77.5
Rhsim09G0152000 Rhododendron simsii HOM05D000286 ORTHO05D000170 6.5e-27 123.6 71 77.5
TPR.G1915 Trifolium pratense HOM05D000286 ORTHO05D000170 6.5e-27 123.6 71 78.9
Lj5g0003715 Lotus japonicus HOM05D000286 ORTHO05D000170 8.5e-27 123.2 71 77.5
Glyma.10G211200 Glycine max HOM05D000286 ORTHO05D000170 1.1e-26 122.9 71 76.1
Prupe.2G213900 Prunus persica HOM05D000286 ORTHO05D000170 1.1e-26 122.9 71 73.2
Ciclev10033579m.g Citrus clementina HOM05D000286 ORTHO05D000170 1.5e-26 122.5 70 78.6
PSO339G2234 Papaver somniferum HOM05D000286 ORTHO05D000170 1.5e-26 122.5 70 80.0
Nitab4.5_0000476g0130 Nicotiana tabacum HOM05D000286 ORTHO05D000170 1.9e-26 122.1 71 77.5
Solyc05g056000.3 Solanum lycopersicum HOM05D000286 ORTHO05D000170 1.9e-26 122.1 71 78.9
Sopen05g034410 Solanum pennellii HOM05D000286 ORTHO05D000170 1.9e-26 122.1 71 78.9
Nitab4.5_0003663g0040 Nicotiana tabacum HOM05D000286 ORTHO05D000170 2.5e-26 121.7 70 80.0
PGSC0003DMG400023465 Solanum tuberosum HOM05D000286 ORTHO05D000170 3.2e-26 121.3 71 78.9
MD07G1174800 Malus domestica HOM05D000286 ORTHO05D000170 4.2e-26 120.9 71 71.8
Psat0s2339g0120 Pisum sativum HOM05D000286 ORTHO05D000170 4.2e-26 120.9 71 74.6
Psat6g183560 Pisum sativum HOM05D000286 ORTHO05D000170 4.2e-26 120.9 71 74.6
Haze_16894 Corylus avellana HOM05D000286 ORTHO05D000170 5.5e-26 120.6 71 76.1
MD01G1108700 Malus domestica HOM05D000286 ORTHO05D000170 5.5e-26 120.6 71 70.4
Hma1.2p1_0063F.1_g034485 Hydrangea macrophylla HOM05D000286 ORTHO05D000170 9.4e-26 119.8 69 78.3
Manes.10G045800 Manihot esculenta HOM05D000286 ORTHO05D000170 9.4e-26 119.8 69 78.3
TWI38G1906 Tripterygium wilfordii HOM05D000286 ORTHO05D000170 9.4e-26 119.8 69 78.3
DCAR_014342 Daucus carota HOM05D000286 ORTHO05D000170 1.2e-25 119.4 71 76.1
Nitab4.5_0000575g0150 Nicotiana tabacum HOM05D000286 ORTHO05D000170 1.6e-25 119.0 71 77.5
CAN.G694.77 Capsicum annuum HOM05D000286 ORTHO05D000170 2.1e-25 118.6 71 76.1
Psat0s2339g0040 Pisum sativum HOM05D000286 ORTHO05D000170 2.1e-25 118.6 71 71.8
Nitab4.5_0010206g0010 Nicotiana tabacum HOM05D000286 ORTHO05D000170 3.6e-25 117.9 71 76.1
CANSAT56G2511 Cannabis sativa HOM05D000286 ORTHO05D000170 6.1e-25 117.1 71 73.2
Sed0000059 Sechium edule HOM05D000286 ORTHO05D000170 6.1e-25 117.1 71 74.6
Ca_10571_v3 Cicer arietinum L. HOM05D000286 ORTHO05D000170 8.0e-25 116.7 71 71.8
RcHm_v2.0_Chr1g0363421 Rosa chinensis HOM05D000286 ORTHO05D000170 8.0e-25 116.7 71 69.0
Cfa021510 Carpinus fangiana HOM05D000286 ORTHO05D000170 1.0e-24 116.3 71 74.6
Cpa.g.sc53.81 Carica papaya HOM05D000286 ORTHO05D000170 1.4e-24 115.9 70 74.3
FvH4_7g19610 Fragaria vesca HOM05D000286 ORTHO05D000170 1.4e-24 115.9 71 67.6
FAN03G2812 Fragaria x ananassa HOM05D000286 ORTHO05D000170 1.4e-24 115.9 71 67.6
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 1.4e-24 115.9 71 67.6
FAN10G4112 Fragaria x ananassa HOM05D000286 ORTHO05D000170 1.4e-24 115.9 71 67.6
Eucgr.G02828 Eucalyptus grandis HOM05D000286 ORTHO05D000170 1.8e-24 115.5 71 70.4
Lsat_1_v5_gn_9_69240 Lactuca sativa HOM05D000286 ORTHO05D000170 1.8e-24 115.5 71 67.6
Gohir.A05G412500 Gossypium hirsutum HOM05D000286 ORTHO05D000170 3.0e-24 114.8 69 76.8
Gorai.012G004700 Gossypium raimondii HOM05D000286 ORTHO05D000170 3.0e-24 114.8 69 76.8
Sc09g0006410 Simmondsia chinensis HOM05D000286 ORTHO05D000170 4.0e-24 114.4 71 70.4
FAN01G0809 Fragaria x ananassa HOM05D000286 ORTHO05D000170 6.8e-24 113.6 71 66.2
PGR142G1331 Punica granatum HOM05D000286 ORTHO05D000170 6.8e-24 113.6 71 73.2
Aa31LG11G10400 Aethionema arabicum HOM05D000286 ORTHO05D000170 8.8e-24 113.2 70 70.0
MBI10_g13400_MAGBIO Magnolia biondii HOM05D000286 ORTHO05D000170 8.8e-24 113.2 71 71.8
Ah.11g050280 Amaranthus hybridus HOM05D000286 ORTHO05D000170 1.2e-23 112.8 71 74.6
AT5G19290 Arabidopsis thaliana HOM05D000286 ORTHO05D000170 1.2e-23 112.8 70 70.0
MELO3C012430.2 Cucumis melo HOM05D000286 ORTHO05D000170 1.2e-23 112.8 71 71.8
Gohir.D04G003532 Gossypium hirsutum HOM05D000286 ORTHO05D000170 1.2e-23 112.8 69 75.4
Aqoxy1G01239 Aquilegia oxysepala HOM05D000286 ORTHO05D000170 1.5e-23 112.5 71 71.8
BcaB08g36588 Brassica carinata HOM05D000286 ORTHO05D000170 1.5e-23 112.5 70 70.0
Hund12045 Selenicereus undatus HOM05D000286 ORTHO05D000170 1.5e-23 112.5 75 72.0
THA.LOC104809881 Tarenaya hassleriana HOM05D000286 ORTHO05D000170 1.5e-23 112.5 70 71.4
CsaV3_5G036310 Cucumis sativus L. HOM05D000286 ORTHO05D000170 2.0e-23 112.1 71 70.4
TWI63G1713 Tripterygium wilfordii HOM05D000286 ORTHO05D000170 2.0e-23 112.1 69 71.0
ClCG05G021000 Citrullus lanatus HOM05D000286 ORTHO05D000170 3.4e-23 111.3 71 70.4
Sp6g25130 Schrenkiella parvula HOM05D000286 ORTHO05D000170 3.4e-23 111.3 70 70.0
A02p05460 Brassica napus HOM05D000286 ORTHO05D000170 4.4e-23 110.9 70 70.0
Carub.0006s1762 Capsella rubella HOM05D000286 ORTHO05D000170 4.4e-23 110.9 70 68.6
BcaC03g13662 Brassica carinata HOM05D000286 ORTHO05D000170 5.7e-23 110.5 70 68.6
BNapus_Darmor_BZH_scaffold_38p02650 Brassica napus HOM05D000286 ORTHO05D000170 5.7e-23 110.5 70 68.6
BolC2t06953H Brassica oleracea HOM05D000286 ORTHO05D000170 5.7e-23 110.5 70 68.6
CARHR193680 Cardamine hirsuta HOM05D000286 ORTHO05D000170 5.7e-23 110.5 70 68.6
COL.COLO4_23664 Corchorus olitorius HOM05D000286 ORTHO05D000170 5.7e-23 110.5 69 73.9
Thhalv10014061m.g Eutrema salsugineum HOM05D000286 ORTHO05D000170 7.5e-23 110.2 71 67.6
AL6G30770 Arabidopsis lyrata HOM05D000286 ORTHO05D000170 9.8e-23 109.8 70 67.1
BolC9t58562H Brassica oleracea HOM05D000286 ORTHO05D000170 1.3e-22 109.4 71 66.2
A10p20390 Brassica napus HOM05D000286 ORTHO05D000170 1.7e-22 109.0 70 67.1
EL10Ac5g10507 Beta vulgaris HOM05D000286 ORTHO05D000170 2.2e-22 108.6 71 73.2
BraA10t44109Z Brassica rapa HOM05D000286 ORTHO05D000170 2.2e-22 108.6 70 67.1
Cc09_g02150 Coffea canephora HOM05D000286 ORTHO05D000170 2.2e-22 108.6 72 69.4
Duzib106G0352 Durio zibethinus HOM05D000286 ORTHO05D000170 2.2e-22 108.6 69 75.4
BcaC04g18582 Brassica carinata HOM05D000286 ORTHO05D000170 3.7e-22 107.8 71 66.2
C09p56990 Brassica napus HOM05D000286 ORTHO05D000170 3.7e-22 107.8 71 66.2
Duzib114G0854 Durio zibethinus HOM05D000286 ORTHO05D000170 3.7e-22 107.8 69 73.9
Peaxi162Scf01527g00001 Petunia axillaris HOM05D000286 ORTHO05D000170 3.7e-22 107.8 73 72.6
Thecc.10G073400 Theobroma cacao HOM05D000286 ORTHO05D000170 3.7e-22 107.8 69 73.9
BraA02t05497Z Brassica rapa HOM05D000286 ORTHO05D000170 6.3e-22 107.1 70 68.6
Peaxi162Scf00156g01211 Petunia axillaris HOM05D000286 ORTHO05D000170 8.3e-22 106.7 73 71.2
Peaxi162Scf00384g00124 Petunia axillaris HOM05D000286 ORTHO05D000170 8.3e-22 106.7 73 71.2
THA.LOC104827298 Tarenaya hassleriana HOM05D000286 ORTHO05D000170 4.1e-21 104.4 70 67.1
Cc09_g02130 Coffea canephora HOM05D000286 ORTHO05D000170 5.4e-21 104.0 72 66.7
SHI21259 Sapria himalayana HOM05D000286 ORTHO05D000170 9.1e-21 103.2 69 63.8
AT5G14980 Arabidopsis thaliana HOM05D000286 ORTHO05D000170 1.2e-20 102.8 72 69.4
Thhalv10014122m.g Eutrema salsugineum HOM05D000286 ORTHO05D000170 1.2e-20 102.8 72 69.4
Sp6g29060 Schrenkiella parvula HOM05D000286 ORTHO05D000170 1.2e-20 102.8 72 68.1
BcaC03g13439 Brassica carinata HOM05D000286 ORTHO05D000170 1.6e-20 102.4 72 69.4
C02p07440 Brassica napus HOM05D007562 ORTHO05D009721 1.6e-20 102.4 72 69.4
BolC2t06675H Brassica oleracea HOM05D000286 ORTHO05D009721 1.6e-20 102.4 72 69.4
AUR62032292 Chenopodium quinoa HOM05D000286 ORTHO05D000170 1.6e-20 102.4 64 76.6
CARHR198330 Cardamine hirsuta HOM05D000286 ORTHO05D000170 2.0e-20 102.1 72 69.4
MSTRG.27455 Avicennia marina HOM05D000286 ORTHO05D000170 2.7e-20 101.7 69 66.7
Zm00001eb130730 Zea mays HOM05D000286 ORTHO05D000170 4.5e-20 100.9 71 60.6
SalBow4G1152 Salvia bowleyana HOM05D000286 ORTHO05D000170 1.0e-19 99.8 70 67.1
Hund21397 Selenicereus undatus HOM05D000286 ORTHO05D000170 1.0e-19 99.8 71 64.8
A02p02820 Brassica napus HOM05D007562 ORTHO05D009721 2.3e-19 98.6 72 68.1
BraA02t05255Z Brassica rapa HOM05D007562 ORTHO05D009721 2.3e-19 98.6 72 68.1
Oeu007389.1 Olea europaea HOM05D000286 ORTHO05D000170 2.3e-19 98.6 69 68.1
AL6G25780 Arabidopsis lyrata HOM05D000286 ORTHO05D000170 6.6e-19 97.1 72 65.3
THA.LOC104802414 Tarenaya hassleriana HOM05D000286 ORTHO05D000170 6.6e-19 97.1 70 65.7
CDE10G0787 Ceratophyllum demersum HOM05D000286 ORTHO05D000170 8.6e-19 96.7 69 62.3
Migut.F02004 Erythranthe guttata HOM05D000286 ORTHO05D000170 8.6e-19 96.7 70 64.3
ATR0115G010 Amborella trichopoda HOM05D000286 ORTHO05D000170 3.3e-18 94.7 74 54.1
ATR0048G063 Amborella trichopoda HOM05D000286 ORTHO05D000170 5.5e-18 94.0 72 55.6
HPP92_002593 Vanilla planifolia HOM05D000286 ORTHO05D000170 5.5e-18 94.0 71 56.3
Peaxi162Scf00072g00628 Petunia axillaris HOM05D000286 ORTHO05D000170 2.1e-17 92.0 65 64.6
Os01g0317800 Oryza sativa ssp. japonica HOM05D000286 ORTHO05D000170 8.0e-17 90.1 72 56.9
Os01g0317500 Oryza sativa ssp. japonica HOM05D000286 ORTHO05D000170 1.8e-16 89.0 72 56.9
MELO3C007072.2 Cucumis melo HOM05D000286 ORTHO05D000170 3.4e-15 84.7 70 51.4
CsaV3_6G052380 Cucumis sativus L. HOM05D000286 ORTHO05D000170 4.4e-15 84.3 70 50.0
Sed0006308 Sechium edule HOM05D000286 ORTHO05D000170 5.7e-15 84.0 70 48.6
PSO675G1399 Papaver somniferum HOM05D000286 ORTHO05D000170 9.8e-15 83.2 73 46.6
SGA_v2.0_scaffold62G21428 Striga asiatica HOM05D000286 ORTHO05D000170 1.7e-14 82.4 72 55.6
ClCG01G025180 Citrullus lanatus HOM05D000286 ORTHO05D000170 2.2e-14 82.0 70 45.7
Aa31LG11G14530 Aethionema arabicum HOM05D002926 ORTHO05D003338 3.7e-14 81.3 58 65.5
Nn7g37135 Nelumbo nucifera HOM05D000286 ORTHO05D000170 6.3e-14 80.5 71 47.9
CSS0017556 Camellia sinensis var. sinensis HOM05D000286 ORTHO05D000170 1.4e-13 79.3 71 42.3
Nn3g20173 Nelumbo nucifera HOM05D000286 ORTHO05D000170 1.4e-13 79.3 73 47.9
Lj2P330T26 Lonicera japonica HOM05D000286 ORTHO05D000170 2.4e-13 78.6 71 42.3
Rhsim13G0121600 Rhododendron simsii HOM05D000286 ORTHO05D000170 2.4e-13 78.6 74 45.9
PGSC0003DMG400021121 Solanum tuberosum HOM05D000286 ORTHO05D000170 3.2e-13 78.2 71 40.8
Rhsim02G0161500 Rhododendron simsii HOM05D000286 ORTHO05D000170 4.1e-13 77.8 73 47.9
Solyc02g069930.1 Solanum lycopersicum HOM05D000286 ORTHO05D000170 5.4e-13 77.4 71 40.8
Sopen02g019070 Solanum pennellii HOM05D000286 ORTHO05D000170 5.4e-13 77.4 71 40.8
vmacro10978 Vaccinium macrocarpon HOM05D000286 ORTHO05D000170 5.4e-13 77.4 72 47.2
Cc09_g07910 Coffea canephora HOM05D000286 ORTHO05D000170 1.2e-12 76.3 69 40.6
TAR629G1333 Trochodendron aralioides HOM05D000286 ORTHO05D000170 1.6e-12 75.9 71 43.7
vmacro03382 Vaccinium macrocarpon HOM05D000286 ORTHO05D000170 1.6e-12 75.9 75 44.0
MBI02_g25786_MAGBIO Magnolia biondii HOM05D000286 ORTHO05D000170 2.0e-12 75.5 71 45.1
AagrBONN_evm.TU.Sc2ySwM_117.1645 Anthoceros agrestis HOM05D000286 ORTHO05D000170 2.7e-12 75.1 70 50.0
Potri.001G466700 Populus trichocarpa HOM05D000286 ORTHO05D000170 2.7e-12 75.1 70 44.3
Gorai.010G246700 Gossypium raimondii HOM05D000286 ORTHO05D000170 3.5e-12 74.7 70 44.3
Ciclev10017467m.g Citrus clementina HOM05D000286 ORTHO05D000170 4.6e-12 74.3 79 41.8
Nitab4.5_0001225g0100 Nicotiana tabacum HOM05D000286 ORTHO05D000170 4.6e-12 74.3 71 40.8
CAN.G79.32 Capsicum annuum HOM05D000286 ORTHO05D000170 5.9e-12 73.9 71 39.4
Ciclev10015863m.g Citrus clementina HOM05D000286 ORTHO05D000170 5.9e-12 73.9 79 41.8
Gohir.A06G202100 Gossypium hirsutum HOM05D000286 ORTHO05D000170 5.9e-12 73.9 70 42.9
DCAR_007842 Daucus carota HOM05D000286 ORTHO05D000170 7.8e-12 73.6 73 42.5
Sabra11G0140900 Salix brachista HOM05D000286 ORTHO05D000170 7.8e-12 73.6 71 39.4
Carub.0006s1314 Capsella rubella HOM05D000286 ORTHO05D000170 1.0e-11 73.2 53 67.9
SGA_v2.0_scaffold223G42866 Striga asiatica HOM05D000286 ORTHO05D000170 1.0e-11 73.2 74 40.5
Migut.M01898 Erythranthe guttata HOM05D000286 ORTHO05D000170 1.3e-11 72.8 77 40.3
Gohir.D06G219600 Gossypium hirsutum HOM05D000286 ORTHO05D000170 1.3e-11 72.8 70 42.9
Mapoly0040s0050 Marchantia polymorpha HOM05D000286 ORTHO05D000170 1.7e-11 72.4 70 50.0
Oeu015177.1 Olea europaea HOM05D000286 ORTHO05D000170 2.3e-11 72.0 72 38.9
unitig_748.g7804 Utricularia gibba HOM05D000286 ORTHO05D000170 2.9e-11 71.6 71 39.4
unitig_37.g12757 Utricularia gibba HOM05D000237 ORTHO05D021516 3.9e-11 71.2 49 69.4
Nitab4.5_0001583g0020 Nicotiana tabacum HOM05D000286 ORTHO05D000170 5.0e-11 70.9 71 38.0
TWI63G1414 Tripterygium wilfordii HOM05D000286 ORTHO05D000170 6.6e-11 70.5 72 41.7
COL.COLO4_26838 Corchorus olitorius HOM05D000286 ORTHO05D000170 8.6e-11 70.1 78 39.7
Manes.14G123500 Manihot esculenta HOM05D000286 ORTHO05D000170 1.1e-10 69.7 71 42.3
TWI38G0225 Tripterygium wilfordii HOM05D000286 ORTHO05D000170 1.9e-10 68.9 72 40.3
QL05p062463 Quercus lobata HOM05D000286 ORTHO05D000170 2.5e-10 68.6 70 38.6
COL.COLO4_26839 Corchorus olitorius HOM05D000286 ORTHO05D000170 7.3e-10 67.0 81 39.5
SMO365G0044 Selaginella moellendorffii HOM05D000286 ORTHO05D000170 2.8e-09 65.1 70 42.9
CDE10G0309 Ceratophyllum demersum HOM05D000286 ORTHO05D000170 7.5e-07 57.0 38 68.4
Pp3c2_4420 Physcomitrium patens HOM05D000286 ORTHO05D000170 2.9e-06 55.1 68 32.4
SGA_v2.0_scaffold22G09754 Striga asiatica HOM05D000286 ORTHO05D000170 6.4e-06 53.9 53 37.7


User provided reference genes

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