Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 1.4e-153 546.2 271 100.0
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 1.9e-121 439.5 280 78.9
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 4.3e-118 428.3 289 74.0
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 5.6e-118 427.9 297 71.4
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 5.6e-118 427.9 286 75.5
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 1.6e-117 426.4 289 72.0
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 2.1e-117 426.0 297 71.7
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 2.8e-117 425.6 290 74.1
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 4.8e-117 424.9 281 75.8
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 1.8e-116 422.9 292 72.6
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 2.4e-116 422.5 267 77.9
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 4.0e-116 421.8 281 74.7
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 4.0e-116 421.8 284 75.0
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 1.2e-115 420.2 283 74.9
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 1.5e-115 419.9 285 73.7
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 2.0e-115 419.5 285 74.0
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 3.4e-115 418.7 285 73.3
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 3.4e-115 418.7 244 82.0
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 4.5e-115 418.3 281 75.8
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 4.5e-115 418.3 280 74.3
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 1.7e-114 416.4 282 75.9
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 1.7e-114 416.4 224 86.6
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 2.9e-114 415.6 285 73.3
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.9e-114 415.6 227 85.0
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 4.9e-114 414.8 285 73.3
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 1.9e-113 412.9 278 75.2
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 2.4e-113 412.5 280 73.2
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 2.4e-113 412.5 284 73.2
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 5.5e-113 411.4 280 71.1
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 7.1e-113 411.0 266 76.7
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 9.3e-113 410.6 282 74.1
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 2.7e-112 409.1 226 85.0
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 2.7e-112 409.1 280 73.6
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 3.5e-112 408.7 228 86.0
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 4.6e-112 408.3 289 72.0
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 4.6e-112 408.3 284 73.6
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.8e-111 406.4 287 74.9
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 1.8e-111 406.4 271 73.4
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 3.0e-111 405.6 284 72.2
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 1.5e-110 403.3 269 73.2
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 3.3e-110 402.1 224 83.9
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 4.3e-110 401.7 234 79.9
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 4.3e-110 401.7 234 79.9
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 4.3e-110 401.7 275 71.6
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 4.3e-110 401.7 266 72.6
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 7.4e-110 401.0 278 73.0
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 4.8e-109 398.3 248 78.6
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 4.8e-109 398.3 222 84.2
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 1.4e-108 396.7 274 72.3
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 3.1e-108 395.6 288 69.1
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 3.1e-108 395.6 228 82.0
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 5.3e-108 394.8 284 69.7
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 9.0e-108 394.0 231 80.5
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 9.0e-108 394.0 252 75.8
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 2.0e-107 392.9 283 68.6
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 3.4e-107 392.1 284 68.7
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 1.0e-106 390.6 245 74.7
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 2.2e-106 389.4 238 77.7
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 3.8e-106 388.7 268 71.6
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 4.9e-106 388.3 275 70.2
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 8.4e-106 387.5 265 69.4
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.4e-105 386.7 283 69.3
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 1.4e-105 386.7 269 72.1
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 1.9e-105 386.3 228 78.9
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 2.5e-105 386.0 273 70.7
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 4.2e-105 385.2 273 70.3
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 4.2e-105 385.2 246 73.2
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 4.2e-105 385.2 273 66.7
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 5.5e-105 384.8 244 75.4
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 1.2e-104 383.6 293 65.9
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 1.2e-104 383.6 241 75.9
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 6.0e-104 381.3 276 67.8
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 1.0e-103 380.6 222 79.3
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 1.0e-103 380.6 226 79.2
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 1.3e-103 380.2 284 68.7
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 1.8e-103 379.8 237 76.4
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 2.3e-103 379.4 222 79.3
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 3.0e-103 379.0 277 70.0
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 3.0e-103 379.0 273 65.9
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 6.7e-103 377.9 249 73.1
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 8.7e-103 377.5 244 72.5
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 1.1e-102 377.1 283 66.8
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 1.1e-100 370.5 263 69.6
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 1.1e-100 370.5 263 69.6
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 1.1e-100 370.5 290 64.8
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 1.5e-99 366.7 263 68.1
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 1.5e-99 366.7 268 69.4
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 8.5e-98 360.9 227 76.2
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 9.3e-97 357.5 225 77.8
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 2.1e-96 356.3 235 73.2
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 4.6e-96 355.1 271 66.8
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 6.1e-96 354.8 286 62.9
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 5.7e-94 348.2 277 64.3
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 1.7e-93 346.7 271 64.9
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 6.3e-93 344.7 244 71.7
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 5.9e-91 338.2 232 69.4
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 6.1e-88 328.2 233 68.7
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 1.4e-87 327.0 268 60.1
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 1.8e-87 326.6 230 74.8
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 1.1e-86 323.9 265 59.6
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.3e-85 320.5 233 63.9
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.7e-85 320.1 229 67.7
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 3.7e-85 318.9 239 66.5
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 8.2e-85 317.8 237 65.0
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 5.3e-84 315.1 269 61.0
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 1.5e-83 313.5 178 83.1
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 5.9e-83 311.6 285 59.6
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 2.2e-82 309.7 285 59.3
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 6.5e-82 308.1 247 60.7
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 1.4e-81 307.0 179 81.6
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.5e-81 306.2 165 86.1
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 5.7e-78 295.0 267 53.9
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 3.5e-75 285.8 233 62.2
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.1e-73 280.8 167 80.2
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 7.2e-73 278.1 210 62.9
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.6e-72 276.9 165 76.4
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 6.3e-69 265.0 164 75.6
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 8.6e-58 228.0 161 66.5
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 4.2e-57 225.7 136 75.7
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 1.2e-56 224.2 191 64.9
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 7.5e-54 214.9 185 61.1
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 5.0e-50 202.2 143 66.4
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 8.6e-50 201.4 215 46.0
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 4.7e-48 195.7 149 63.1
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 9.8e-46 188.0 170 61.2
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 7.0e-44 181.8 209 46.9
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 2.7e-43 179.9 179 58.1
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 1.0e-42 177.9 168 55.4
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 7.8e-35 151.8 91 74.7
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 5.2e-31 139.0 172 52.3
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 6.6e-26 122.1 133 54.9
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 1.9e-25 120.6 90 62.2
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.4e-21 105.1 127 45.7
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 4.6e-19 99.4 80 60.0
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 2.0e-14 84.0 247 28.3
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 3.8e-13 79.7 42 76.2
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 2.7e-11 73.6 77 51.9
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 2.5e-09 67.0 54 63.0
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 9.6e-09 65.1 87 35.6


User provided reference genes

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