Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 1.4e-195 686.0 322 100.0
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 8.4e-129 464.2 304 70.7
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 8.2e-124 447.6 303 70.3
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 9.0e-123 444.1 302 69.5
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 2.5e-120 436.0 313 65.8
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 5.5e-120 434.9 302 67.5
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 2.3e-118 429.5 303 67.0
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 1.5e-117 426.8 317 63.1
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 2.8e-116 422.5 315 63.5
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 6.3e-116 421.4 317 60.9
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 1.1e-115 420.6 293 66.9
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 1.8e-115 419.9 288 68.8
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 9.0e-115 417.5 326 63.8
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 3.2e-112 409.1 280 67.5
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 4.2e-112 408.7 253 73.5
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 5.5e-112 408.3 325 62.8
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 7.2e-112 407.9 278 66.5
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 6.1e-111 404.8 307 62.5
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.0e-110 404.1 344 58.4
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 2.0e-109 399.8 280 68.2
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 2.0e-109 399.8 270 69.6
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 3.3e-109 399.1 293 65.5
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 7.4e-109 397.9 255 70.6
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 9.7e-109 397.5 261 69.0
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 9.7e-109 397.5 287 65.2
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 2.2e-108 396.4 290 64.5
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 2.2e-108 396.4 287 66.2
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 6.3e-108 394.8 285 64.2
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 8.2e-108 394.4 285 64.2
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 3.1e-107 392.5 321 60.1
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 5.3e-107 391.7 285 63.5
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 5.3e-107 391.7 313 59.7
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 9.1e-107 391.0 251 70.5
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 1.5e-106 390.2 265 67.5
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 2.0e-106 389.8 274 66.8
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 2.0e-106 389.8 289 63.3
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 2.6e-106 389.4 249 70.7
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 2.6e-106 389.4 251 69.7
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 1.1e-104 384.0 300 61.3
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 1.1e-104 384.0 272 64.0
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 1.4e-104 383.6 249 66.7
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 2.5e-104 382.9 301 64.5
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 5.5e-104 381.7 257 66.5
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 1.6e-103 380.2 254 68.5
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 2.1e-103 379.8 263 65.4
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 2.1e-103 379.8 279 63.4
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 3.6e-103 379.0 256 66.4
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 6.1e-103 378.3 295 63.1
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 3.0e-102 375.9 264 65.5
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 5.1e-102 375.2 269 64.7
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 2.6e-101 372.9 248 64.5
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 7.4e-101 371.3 263 64.6
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 9.7e-101 370.9 248 65.3
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 2.2e-100 369.8 299 58.9
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 6.3e-100 368.2 248 67.3
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 6.3e-100 368.2 254 65.4
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 1.4e-99 367.1 282 60.6
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 2.4e-99 366.3 255 64.7
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 7.0e-99 364.8 255 66.3
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 2.0e-98 363.2 322 55.3
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 1.0e-97 360.9 263 63.9
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 1.0e-97 360.9 263 63.9
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 6.5e-97 358.2 263 63.9
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 6.5e-97 358.2 291 61.5
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 1.9e-96 356.7 265 63.4
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 5.5e-96 355.1 290 59.7
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 1.2e-95 354.0 367 50.4
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 1.6e-95 353.6 269 63.2
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 4.7e-95 352.1 325 57.5
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 3.0e-94 349.4 287 58.5
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 6.7e-94 348.2 287 58.2
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 1.1e-93 347.4 266 62.8
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 4.4e-93 345.5 287 57.8
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 3.8e-89 332.4 246 63.4
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 2.0e-85 320.1 278 55.0
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 9.8e-85 317.8 274 57.7
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 9.1e-83 311.2 239 58.2
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 5.9e-82 308.5 264 56.8
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 1.0e-81 307.8 204 69.1
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 5.2e-78 295.4 265 55.1
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 1.3e-76 290.8 284 53.9
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 8.0e-71 271.6 211 59.2
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 1.5e-69 267.3 251 51.8
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 1.3e-57 227.6 134 73.9
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 7.3e-56 221.9 251 43.4
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 9.5e-56 221.5 180 56.7
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 1.1e-54 218.0 249 45.4
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 1.1e-54 218.0 183 58.5
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 8.3e-52 208.4 256 42.2
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.5e-48 197.6 169 60.9
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 6.0e-42 175.6 106 69.8
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.1e-40 171.4 253 36.0
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 8.4e-36 155.2 103 64.1
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 1.4e-35 154.5 157 54.8
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 3.9e-33 146.4 86 69.8
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 2.2e-28 130.6 80 68.8
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 3.0e-25 120.2 286 28.3
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 3.0e-25 120.2 83 61.4
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 3.1e-22 110.2 67 67.2
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 1.5e-21 107.8 96 59.4
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 4.6e-18 96.3 50 76.0
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 4.6e-18 96.3 50 76.0
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 2.5e-16 90.5 74 64.9
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 2.5e-16 90.5 74 64.9
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 2.4e-14 84.0 58 63.8
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 2.4e-14 84.0 58 63.8
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 3.8e-12 76.6 63 52.4
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 7.1e-11 72.4 55 58.2
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 1.1e-08 65.1 41 65.9
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 1.5e-08 64.7 62 45.2
Actinidia21637 Actinidia chinensis HOM05D007092 ORTHO05D008947 3.3e-08 63.5 37 70.3
SEGI_38624 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 3.7e-07 60.1 46 54.3
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 1.4e-06 58.2 31 74.2
SEGI_02665 Sequoiadendron giganteum HOM05D007092 ORTHO05D050975 9.0e-06 55.5 65 47.7


User provided reference genes

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