Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016107001 Vitis vinifera HOM05D004918 ORTHO05D005706 8.7e-142 506.9 246 100.0
Actinidia25464 Actinidia chinensis HOM05D004918 ORTHO05D005706 5.5e-88 328.2 207 70.0
CSS0025832 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 4.0e-86 322.0 230 65.7
Hma1.2p1_1914F.1_g307380 Hydrangea macrophylla HOM05D004918 ORTHO05D005706 4.0e-86 322.0 207 71.5
TAR625G0238 Trochodendron aralioides HOM05D004918 ORTHO05D005706 6.7e-86 321.2 219 68.0
Dinv23270 Davidia involucrata HOM05D004918 ORTHO05D005706 5.7e-85 318.2 229 66.4
Manes.11G069000 Manihot esculenta HOM05D004918 ORTHO05D005706 6.3e-84 314.7 234 62.8
Prupe.3G103300 Prunus persica HOM05D004918 ORTHO05D005706 8.5e-81 304.3 220 65.9
ClCG10G012810 Citrullus lanatus HOM05D004918 ORTHO05D005706 1.5e-80 303.5 204 67.6
RcHm_v2.0_Chr2g0132361 Rosa chinensis HOM05D004918 ORTHO05D005706 3.2e-80 302.4 218 65.6
Ciclev10026430m.g Citrus clementina HOM05D004918 ORTHO05D005706 5.5e-80 301.6 212 65.1
Nn2g14031 Nelumbo nucifera HOM05D004918 ORTHO05D005706 9.4e-80 300.8 201 67.2
Oeu004556.1 Olea europaea HOM05D004918 ORTHO05D005706 1.6e-79 300.1 203 64.5
Potri.003G184701 Populus trichocarpa HOM05D004918 ORTHO05D005706 2.1e-79 299.7 228 61.0
TWI12G0375 Tripterygium wilfordii HOM05D004918 ORTHO05D005706 2.1e-79 299.7 212 65.1
Lj6g0018730 Lotus japonicus HOM05D004918 ORTHO05D005706 3.6e-79 298.9 217 61.3
Nn2g12451 Nelumbo nucifera HOM05D004918 ORTHO05D005706 3.6e-79 298.9 208 64.9
Cfa001859 Carpinus fangiana HOM05D004918 ORTHO05D005706 4.7e-79 298.5 238 60.1
MD12G1013200 Malus domestica HOM05D004918 ORTHO05D005706 8.0e-79 297.7 218 63.8
CsaV3_3G032650 Cucumis sativus L. HOM05D004918 ORTHO05D005706 1.8e-78 296.6 207 64.3
Glyma.09G000800 Glycine max HOM05D004918 ORTHO05D005706 3.0e-78 295.8 205 62.9
Thecc.06G046100 Theobroma cacao HOM05D004918 ORTHO05D005706 3.0e-78 295.8 227 58.1
VMungo1309G0542 Vigna mungo HOM05D004918 ORTHO05D005706 4.0e-78 295.4 217 62.2
Atru.chr1.2801 Acer truncatum HOM05D004918 ORTHO05D005706 5.2e-78 295.0 202 68.8
Gorai.009G122300 Gossypium raimondii HOM05D004918 ORTHO05D005706 2.6e-77 292.7 224 58.0
MD14G1138800 Malus domestica HOM05D004918 ORTHO05D005706 2.6e-77 292.7 220 63.2
CiPaw.01G073400 Carya illinoinensis HOM05D004918 ORTHO05D005706 3.4e-77 292.4 214 65.9
Duzib192G0308 Durio zibethinus HOM05D004918 ORTHO05D005706 3.4e-77 292.4 230 57.4
Migut.I00673 Erythranthe guttata HOM05D004918 ORTHO05D005706 3.4e-77 292.4 220 60.9
DCAR_025541 Daucus carota HOM05D004918 ORTHO05D005706 4.4e-77 292.0 216 59.7
Sc05g0005820 Simmondsia chinensis HOM05D004918 ORTHO05D005706 5.7e-77 291.6 195 64.6
Gohir.A05G117500 Gossypium hirsutum HOM05D004918 ORTHO05D005706 7.5e-77 291.2 224 57.6
CiPaw.02G163500 Carya illinoinensis HOM05D004918 ORTHO05D005706 1.7e-76 290.0 212 63.7
Medtr3g110270 Medicago truncatula HOM05D004918 ORTHO05D005706 2.2e-76 289.7 213 62.0
Sabra03G0135200 Salix brachista HOM05D004918 ORTHO05D005706 2.8e-76 289.3 228 59.2
Atru.chr8.1159 Acer truncatum HOM05D004918 ORTHO05D005706 6.3e-76 288.1 202 67.8
Psat5g020280 Pisum sativum HOM05D004918 ORTHO05D005706 1.1e-75 287.3 211 61.6
Cpa.g.sc14.108 Carica papaya HOM05D004918 ORTHO05D005706 1.4e-75 287.0 205 63.4
FAN09G4697 Fragaria x ananassa HOM05D004918 ORTHO05D005706 2.4e-75 286.2 214 63.6
Lalb_Chr13g0301111 Lupinus albus HOM05D004918 ORTHO05D005706 2.4e-75 286.2 229 57.6
Eucgr.F03982 Eucalyptus grandis HOM05D004918 ORTHO05D005706 3.1e-75 285.8 233 60.9
Sed0025979 Sechium edule HOM05D004918 ORTHO05D005706 3.1e-75 285.8 245 56.7
TPR.G15094 Trifolium pratense HOM05D004918 ORTHO05D005706 3.1e-75 285.8 205 62.4
CANSAT35G0550 Cannabis sativa HOM05D004918 ORTHO05D005706 4.1e-75 285.4 221 61.5
PSO063G6564 Papaver somniferum HOM05D004918 ORTHO05D005706 7.0e-75 284.6 219 58.0
ECA232G4560 Erigeron canadensis HOM05D004918 ORTHO05D005706 2.7e-74 282.7 218 58.7
PSO724G0600 Papaver somniferum HOM05D004918 ORTHO05D005706 2.7e-74 282.7 219 58.0
PSO729G0217 Papaver somniferum HOM05D004918 ORTHO05D005706 3.5e-74 282.3 219 58.0
QL10p031453 Quercus lobata HOM05D004918 ORTHO05D005706 3.5e-74 282.3 192 66.7
PSO017G2949 Papaver somniferum HOM05D004918 ORTHO05D005706 1.0e-73 280.8 219 58.0
PGR102G0155 Punica granatum HOM05D004918 ORTHO05D005706 1.0e-73 280.8 211 61.6
Cc04_g05650 Coffea canephora HOM05D004918 ORTHO05D005706 2.9e-73 279.3 230 57.8
Peaxi162Scf00314g01045 Petunia axillaris HOM05D004918 ORTHO05D005706 1.1e-72 277.3 197 63.5
Cc04_g05280 Coffea canephora HOM05D004918 ORTHO05D005706 1.5e-72 276.9 230 57.8
Nitab4.5_0002700g0180 Nicotiana tabacum HOM05D004918 ORTHO05D005706 2.5e-72 276.2 230 58.3
Phvul.009G194500 Phaseolus vulgaris HOM05D004918 ORTHO05D005706 2.5e-72 276.2 200 62.0
Nitab4.5_0004738g0120 Nicotiana tabacum HOM05D004918 ORTHO05D005706 3.2e-72 275.8 236 57.2
arahy.Tifrunner.gnm1.ann1.T9YNFF Arachis hypogaea HOM05D004918 ORTHO05D005706 4.2e-72 275.4 210 58.1
PGSC0003DMG400014153 Solanum tuberosum HOM05D004918 ORTHO05D005706 1.6e-71 273.5 212 60.4
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 2.1e-71 273.1 184 68.5
Sopen03g036560 Solanum pennellii HOM05D004918 ORTHO05D005706 2.1e-71 273.1 232 56.9
SalBow8G2778 Salvia bowleyana HOM05D004918 ORTHO05D005706 3.6e-71 272.3 214 57.5
HanXRQChr10g0298641 Helianthus annuus HOM05D004918 ORTHO05D005706 8.0e-71 271.2 211 61.6
CDE02G0643 Ceratophyllum demersum HOM05D004918 ORTHO05D005706 1.0e-70 270.8 205 60.5
THA.LOC104812419 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 1.0e-70 270.8 229 56.8
MELO3C028676.2 Cucumis melo HOM05D004918 ORTHO05D005706 1.8e-70 270.0 214 58.4
SGA_v2.0_scaffold419G51286 Striga asiatica HOM05D004918 ORTHO05D005706 1.8e-70 270.0 232 53.9
THA.LOC104808174 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 1.8e-70 270.0 228 55.7
Aa31LG7G620 Aethionema arabicum HOM05D004918 ORTHO05D005706 6.8e-70 268.1 215 58.1
Ah.01g002790 Amaranthus hybridus HOM05D004918 ORTHO05D005706 8.8e-70 267.7 186 61.8
MSTRG.22808 Avicennia marina HOM05D004918 ORTHO05D005706 8.8e-70 267.7 203 59.6
HanXRQChr17g0561891 Helianthus annuus HOM05D004918 ORTHO05D005706 1.2e-69 267.3 232 57.3
MBI19_g12142_MAGBIO Magnolia biondii HOM05D004918 ORTHO05D005706 1.3e-68 263.8 212 59.4
AL1G28210 Arabidopsis lyrata HOM05D004918 ORTHO05D005706 2.2e-68 263.1 201 59.2
CARHR016550 Cardamine hirsuta HOM05D004918 ORTHO05D005706 3.7e-68 262.3 217 58.1
FAN02G2144 Fragaria x ananassa HOM05D004918 ORTHO05D005706 6.3e-68 261.5 241 56.4
A09p61040 Brassica napus HOM05D004918 ORTHO05D005706 7.0e-67 258.1 213 54.5
Sp1g14360 Schrenkiella parvula HOM05D004918 ORTHO05D005706 1.6e-66 256.9 213 56.8
BraA09t41477Z Brassica rapa HOM05D004918 ORTHO05D005706 3.5e-66 255.8 213 54.5
Thhalv10008658m.g Eutrema salsugineum HOM05D004918 ORTHO05D005706 4.5e-66 255.4 212 56.6
Glyma.09G000900 Glycine max HOM05D004918 ORTHO05D005706 5.9e-66 255.0 163 69.3
A06p12070 Brassica napus HOM05D004918 ORTHO05D005706 7.7e-66 254.6 212 57.1
A08p31410 Brassica napus HOM05D004918 ORTHO05D005706 7.7e-66 254.6 197 58.4
BraA08t35064Z Brassica rapa HOM05D004918 ORTHO05D005706 7.7e-66 254.6 197 58.4
Carub.0001s1585 Capsella rubella HOM05D004918 ORTHO05D005706 7.7e-66 254.6 200 57.5
Lsat_1_v5_gn_4_85101 Lactuca sativa HOM05D004918 ORTHO05D005706 7.7e-66 254.6 192 60.4
arahy.Tifrunner.gnm1.ann1.ZUNL57 Arachis hypogaea HOM05D004918 ORTHO05D005706 1.3e-65 253.8 233 52.8
Oeu035883.1 Olea europaea HOM05D004918 ORTHO05D005706 1.3e-65 253.8 191 60.2
BraA06t24376Z Brassica rapa HOM05D004918 ORTHO05D005706 2.3e-65 253.1 213 57.3
BcaB03g14507 Brassica carinata HOM05D004918 ORTHO05D005706 3.8e-65 252.3 218 53.7
C05p14240 Brassica napus HOM05D004918 ORTHO05D005706 3.8e-65 252.3 213 55.9
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 3.8e-65 252.3 186 60.2
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 5.0e-65 251.9 213 55.4
BcaC07g38802 Brassica carinata HOM05D004918 ORTHO05D005706 8.6e-65 251.1 216 54.6
BcaC05g25623 Brassica carinata HOM05D004918 ORTHO05D005706 1.1e-64 250.8 213 55.4
PGSC0003DMG402014462 Solanum tuberosum HOM05D004918 ORTHO05D005706 1.9e-64 250.0 196 56.1
C08p17380 Brassica napus HOM05D004918 ORTHO05D005706 1.2e-63 247.3 216 53.7
BolC8t49364H Brassica oleracea HOM05D004918 ORTHO05D005706 1.2e-63 247.3 216 53.7
SEGI_14369 Sequoiadendron giganteum HOM05D004918 ORTHO05D005706 2.8e-63 246.1 186 57.0
BolC5t30156H Brassica oleracea HOM05D004918 ORTHO05D005706 4.7e-63 245.4 214 55.1
Sopen12g021620 Solanum pennellii HOM05D004918 ORTHO05D005706 4.7e-63 245.4 196 56.1
Solyc12g042530.2 Solanum lycopersicum HOM05D004918 ORTHO05D005706 6.1e-63 245.0 196 56.6
HanXRQChr16g0499441 Helianthus annuus HOM05D004918 ORTHO05D005706 8.0e-63 244.6 228 54.8
Solyc03g117650.4 Solanum lycopersicum HOM05D004918 ORTHO05D005706 8.0e-63 244.6 212 55.2
vmacro19072 Vaccinium macrocarpon HOM05D004918 ORTHO05D005706 1.0e-62 244.2 203 57.1
FAN09G3573 Fragaria x ananassa HOM05D004918 ORTHO05D005706 1.4e-62 243.8 220 57.7
Zm00001eb403520 Zea mays HOM05D004918 ORTHO05D005706 1.4e-62 243.8 216 55.1
AT1G16040 Arabidopsis thaliana HOM05D004918 ORTHO05D005706 3.0e-62 242.7 205 53.7
BcaB02g06654 Brassica carinata HOM05D004918 ORTHO05D005706 5.2e-62 241.9 212 54.7
COL.COLO4_24896 Corchorus olitorius HOM05D004918 ORTHO05D005706 1.7e-60 236.9 196 55.6
HPP92_001544 Vanilla planifolia HOM05D004918 ORTHO05D005706 9.2e-59 231.1 200 55.0
ATR0568G024 Amborella trichopoda HOM05D004918 ORTHO05D005706 1.6e-58 230.3 173 60.1
Os03g0129000 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 1.6e-58 230.3 241 49.0
SHI05687 Sapria himalayana HOM05D004918 ORTHO05D005706 8.6e-57 224.6 188 53.2
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 1.5e-56 223.8 237 47.3
CAN.G276.2 Capsicum annuum HOM05D004918 ORTHO05D005706 4.3e-56 222.2 168 61.3
Haze_16687 Corylus avellana HOM05D004918 ORTHO05D005706 1.2e-55 220.7 202 55.0
BcaB03g13048 Brassica carinata HOM05D004918 ORTHO05D005706 1.2e-53 214.2 223 48.0
Aqoxy4G02614 Aquilegia oxysepala HOM05D004918 ORTHO05D005706 4.9e-52 208.8 121 72.7
FAN14G3036 Fragaria x ananassa HOM05D004918 ORTHO05D005706 1.6e-50 203.8 259 47.9
Pp3c8_15970 Physcomitrium patens HOM05D004918 ORTHO05D005706 2.3e-49 199.9 210 44.3
unitig_62.g23577 Utricularia gibba HOM05D004918 ORTHO05D005706 4.3e-48 195.7 247 44.5
arahy.Tifrunner.gnm1.ann1.BN6NH6 Arachis hypogaea HOM05D004918 ORTHO05D005706 6.8e-46 188.3 233 44.6
arahy.Tifrunner.gnm1.ann1.U5XJV3 Arachis hypogaea HOM05D004918 ORTHO05D005706 6.8e-46 188.3 225 45.8
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 6.8e-46 188.3 187 47.6
Mapoly0005s0096 Marchantia polymorpha HOM05D004918 ORTHO05D005706 1.2e-45 187.6 187 43.3
Ca_15577_v3 Cicer arietinum L. HOM05D004918 ORTHO05D005706 1.4e-43 180.6 108 71.3
CBR_g41678 Chara braunii HOM05D004918 ORTHO05D005706 4.1e-43 179.1 135 54.1
FvH4_6g28300 Fragaria vesca HOM05D004918 ORTHO05D005706 4.1e-43 179.1 151 60.9
CAN.G1008.5 Capsicum annuum HOM05D000348 ORTHO05D005706 1.3e-41 174.1 192 47.4
SMO351G0301 Selaginella moellendorffii HOM05D004918 ORTHO05D005706 1.8e-30 137.1 151 46.4
Gohir.D05G118400 Gossypium hirsutum HOM05D004918 ORTHO05D005706 2.1e-26 123.6 117 47.9
AagrBONN_evm.TU.Sc2ySwM_344.4108 Anthoceros agrestis HOM05D004918 ORTHO05D005706 1.7e-25 120.6 83 56.6
Os10g0200800 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 2.6e-21 106.7 118 44.1
CAN.G548.17 Capsicum annuum HOM05D002478 ORTHO05D005706 3.8e-20 102.8 61 70.5
CSS0035645 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 6.4e-20 102.1 99 49.5
CAN.G1986.5 Capsicum annuum HOM05D004918 ORTHO05D005706 5.4e-19 99.0 83 50.6
CAN.G53.21 Capsicum annuum HOM05D002478 ORTHO05D020307 9.3e-19 98.2 86 53.5
Zm00001eb002240 Zea mays HOM05D004918 ORTHO05D005706 1.6e-18 97.4 126 47.6
MELO3C000966.2 Cucumis melo HOM05D004918 ORTHO05D005706 4.6e-18 95.9 92 48.9
CAN.G829.5 Capsicum annuum HOM05D004534 ORTHO05D005706 2.3e-17 93.6 59 61.0
Sed0005872 Sechium edule HOM05D004918 ORTHO05D005706 3.1e-14 83.2 95 43.2
AUR62034078 Chenopodium quinoa HOM05D004918 ORTHO05D005706 9.0e-14 81.6 53 69.8
BcaC05g25622 Brassica carinata HOM05D004918 ORTHO05D005706 3.4e-13 79.7 40 72.5
CSS0004145 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 3.4e-13 79.7 107 42.1
AUR62012861 Chenopodium quinoa HOM05D004918 ORTHO05D005706 8.4e-12 75.1 51 66.7
MELO3C032630.2 Cucumis melo HOM05D004918 ORTHO05D005706 8.4e-12 75.1 77 45.5
BcaC03g14995 Brassica carinata HOM05D004918 ORTHO05D005706 2.4e-11 73.6 56 53.6
Actinidia08937 Actinidia chinensis HOM05D004918 ORTHO05D005706 7.9e-10 68.6 50 62.0
CAN.G1235.23 Capsicum annuum HOM05D004918 ORTHO05D005706 1.5e-08 64.3 31 74.2
Cfa026120 Carpinus fangiana HOM05D004918 ORTHO05D125238 5.6e-08 62.4 131 32.1
MCO15G581 Micromonas commoda HOM05D004918 ORTHO05D005706 5.6e-08 62.4 156 28.2
Actinidia18259 Actinidia chinensis HOM05D004918 ORTHO05D005706 1.1e-06 58.2 52 55.8


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