Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016106001 Vitis vinifera HOM05D008438 ORTHO05D008827 0.0e+00 1286.6 745 100.0
TAR625G0030 Trochodendron aralioides HOM05D008438 ORTHO05D008827 3.9e-76 290.4 697 34.7
Haze_16688 Corylus avellana HOM05D008438 ORTHO05D008827 1.1e-67 262.3 744 30.0
Dinv23269 Davidia involucrata HOM05D017379 ORTHO05D008827 1.3e-63 248.8 470 36.8
Dinv21425 Davidia involucrata HOM05D017379 ORTHO05D008827 6.0e-61 240.0 468 37.4
Actinidia08936 Actinidia chinensis HOM05D017379 ORTHO05D008827 1.3e-60 238.8 739 32.3
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 9.3e-46 189.5 779 34.9
Peaxi162Scf00314g01044 Petunia axillaris HOM05D008438 ORTHO05D008827 3.2e-38 164.5 736 25.7
Rhsim12G0185500 Rhododendron simsii HOM05D017379 ORTHO05D008827 1.2e-37 162.5 843 24.9
Cc04_g05290 Coffea canephora HOM05D008438 ORTHO05D008827 6.0e-37 160.2 762 25.2
Nitab4.5_0004738g0100 Nicotiana tabacum HOM05D008438 ORTHO05D008827 7.9e-37 159.8 725 26.3
Hma1.2p1_1914F.1_g307390 Hydrangea macrophylla HOM05D008438 ORTHO05D008827 1.1e-35 156.0 203 44.3
AUR62032995 Chenopodium quinoa HOM05D032589 ORTHO05D008827 2.2e-31 141.7 84 72.6
Actinidia18261 Actinidia chinensis HOM05D017379 ORTHO05D008827 2.9e-31 141.4 710 26.3
Manes.04G100800 Manihot esculenta HOM05D008438 ORTHO05D008827 2.9e-31 141.4 729 25.0
Actinidia36865 Actinidia chinensis HOM05D017379 ORTHO05D008827 3.2e-30 137.9 471 28.7
Actinidia26582 Actinidia chinensis HOM05D017379 ORTHO05D008827 4.2e-30 137.5 471 28.7
CAN.G1008.6 Capsicum annuum HOM05D008438 ORTHO05D008827 2.7e-29 134.8 757 26.0
ECA247G0974 Erigeron canadensis HOM05D008438 ORTHO05D008827 6.0e-29 133.7 82 67.1
MD17G1226300 Malus domestica HOM05D015689 ORTHO05D008827 1.3e-28 132.5 84 66.7
Nitab4.5_0002700g0070 Nicotiana tabacum HOM05D008438 ORTHO05D008827 3.0e-28 131.3 715 25.7
MSTRG.22807 Avicennia marina HOM05D008438 ORTHO05D008827 3.9e-28 131.0 213 39.0
SGA_v2.0_scaffold5G02798 Striga asiatica HOM05D008438 ORTHO05D008827 6.7e-28 130.2 79 68.4
SalBow7G4248 Salvia bowleyana HOM05D008438 ORTHO05D008827 1.1e-27 129.4 159 42.8
Prupe.3G103500 Prunus persica HOM05D015689 ORTHO05D008827 5.7e-27 127.1 80 67.5
TWI18G0426 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 7.4e-27 126.7 81 65.4
Migut.I00674 Erythranthe guttata HOM05D008438 ORTHO05D008827 1.3e-26 125.9 731 24.9
Oeu004554.3 Olea europaea HOM05D008438 ORTHO05D008827 1.3e-26 125.9 79 67.1
EL10Ac8g19397 Beta vulgaris HOM05D032589 ORTHO05D008827 2.1e-26 125.2 82 67.1
Hund12562 Selenicereus undatus HOM05D008438 ORTHO05D008827 8.2e-26 123.2 81 67.9
PGSC0003DMG400014154 Solanum tuberosum HOM05D008438 ORTHO05D008827 8.2e-26 123.2 707 26.2
FAN02G3655 Fragaria x ananassa HOM05D015689 ORTHO05D008827 1.1e-25 122.9 79 65.8
RcHm_v2.0_Chr2g0132351 Rosa chinensis HOM05D015689 ORTHO05D008827 1.4e-25 122.5 79 64.6
FvH4_6g28290 Fragaria vesca HOM05D015689 ORTHO05D008827 1.8e-25 122.1 79 65.8
FAN14G1731 Fragaria x ananassa HOM05D015689 ORTHO05D008827 1.8e-25 122.1 79 65.8
FAN09G3978 Fragaria x ananassa HOM05D015689 ORTHO05D008827 2.4e-25 121.7 79 65.8
HanXRQChr04g0100031 Helianthus annuus HOM05D008438 ORTHO05D008827 3.1e-25 121.3 706 23.8
Sc10g0008430 Simmondsia chinensis HOM05D008438 ORTHO05D008827 4.0e-25 120.9 79 65.8
Solyc03g117660.4 Solanum lycopersicum HOM05D008438 ORTHO05D008827 1.2e-24 119.4 690 24.9
Glyma.13G371300 Glycine max HOM05D022716 ORTHO05D008827 1.5e-24 119.0 80 65.0
HanXRQChr02g0033611 Helianthus annuus HOM05D008438 ORTHO05D008827 2.6e-24 118.2 70 67.1
Lj3g0015243 Lotus japonicus HOM05D022716 ORTHO05D008827 7.6e-24 116.7 82 59.8
SGA_v2.0_scaffold37G14678 Striga asiatica HOM05D008438 ORTHO05D008827 7.6e-24 116.7 77 61.0
Glyma.15G002400 Glycine max HOM05D022716 ORTHO05D008827 1.0e-23 116.3 82 62.2
Duzib235G0641 Durio zibethinus HOM05D032892 ORTHO05D008827 1.3e-23 115.9 378 31.7
Sopen03g036570 Solanum pennellii HOM05D008438 ORTHO05D008827 2.9e-23 114.8 690 24.6
ClCG09G003500 Citrullus lanatus HOM05D008438 ORTHO05D008827 1.1e-22 112.8 79 57.0
MELO3C023487.2 Cucumis melo HOM05D008438 ORTHO05D008827 1.1e-22 112.8 84 53.6
COL.COLO4_26771 Corchorus olitorius HOM05D032892 ORTHO05D008827 1.4e-22 112.5 666 24.0
Manes.11G069100 Manihot esculenta HOM05D008438 ORTHO05D008827 1.4e-22 112.5 85 57.6
CsaV3_7G031700 Cucumis sativus L. HOM05D008438 ORTHO05D008827 1.9e-22 112.1 83 54.2
Aqoxy7G03345 Aquilegia oxysepala HOM05D008438 ORTHO05D008827 5.5e-22 110.5 79 62.0
VMungo1080G1089 Vigna mungo HOM05D022716 ORTHO05D008827 5.5e-22 110.5 80 60.0
Sed0012806 Sechium edule HOM05D008438 ORTHO05D008827 1.2e-21 109.4 82 57.3
Phvul.005G183500 Phaseolus vulgaris HOM05D022716 ORTHO05D008827 2.1e-21 108.6 80 60.0
Sabra01G0028800 Salix brachista HOM05D008438 ORTHO05D008827 4.6e-21 107.5 82 53.7
unitig_52.g17481 Utricularia gibba HOM05D008438 ORTHO05D008827 1.0e-20 106.3 70 58.6
Potri.001G042000 Populus trichocarpa HOM05D008438 ORTHO05D008827 1.8e-20 105.5 80 53.8
Eucgr.F03984 Eucalyptus grandis HOM05D008438 ORTHO05D008827 8.7e-20 103.2 83 51.8
Ciclev10026162m.g Citrus clementina HOM05D008438 ORTHO05D008827 2.2e-18 98.6 69 59.4
PSO782G4356 Papaver somniferum HOM05D008438 ORTHO05D008827 4.8e-18 97.4 78 48.7
PSO063G1826 Papaver somniferum HOM05D008438 ORTHO05D008827 6.3e-18 97.1 78 48.7
CANSAT56G0832 Cannabis sativa HOM05D008438 ORTHO05D008827 1.1e-17 96.3 75 50.7
Lsat_1_v5_gn_4_132640 Lactuca sativa HOM05D008438 ORTHO05D008827 6.9e-17 93.6 50 76.0
Actinidia38661 Actinidia chinensis HOM05D008438 ORTHO05D008827 1.3e-15 89.4 80 50.0
Nn8g40077 Nelumbo nucifera HOM05D008438 ORTHO05D008827 1.7e-15 89.0 78 50.0
Nitab4.5_0006744g0030 Nicotiana tabacum HOM05D022295 ORTHO05D008827 6.1e-13 80.5 79 41.8
Nitab4.5_0001036g0130 Nicotiana tabacum HOM05D022295 ORTHO05D008827 1.4e-12 79.3 79 41.8
Dinv42819 Davidia involucrata HOM05D019090 ORTHO05D008827 1.8e-12 79.0 149 33.6
Dinv43281 Davidia involucrata HOM05D019090 ORTHO05D008827 1.8e-12 79.0 149 33.6
TWI34G1835 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 1.8e-12 79.0 74 48.6
Rhsim03G0259300 Rhododendron simsii HOM05D008438 ORTHO05D008827 5.1e-12 77.4 82 42.7
TWI32G0905 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 6.7e-12 77.0 75 48.0
Cfa020785 Carpinus fangiana HOM05D019529 ORTHO05D008827 8.8e-12 76.6 74 45.9
COL.COLO4_05403 Corchorus olitorius HOM05D019525 ORTHO05D008827 1.5e-11 75.9 78 43.6
Peaxi162Scf00563g00416 Petunia axillaris HOM05D022295 ORTHO05D008827 3.3e-11 74.7 79 40.5
Solyc07g005980.2 Solanum lycopersicum HOM05D022295 ORTHO05D008827 1.3e-10 72.8 81 37.0
Thecc.09G153900 Theobroma cacao HOM05D019525 ORTHO05D008827 1.3e-10 72.8 78 42.3
ECA234G2252 Erigeron canadensis HOM05D019529 ORTHO05D008827 1.7e-10 72.4 83 33.7
QL02p094192 Quercus lobata HOM05D019529 ORTHO05D008827 1.7e-10 72.4 88 38.6
Sopen07g002110 Solanum pennellii HOM05D022295 ORTHO05D008827 2.2e-10 72.0 81 37.0
Haze_19141 Corylus avellana HOM05D019529 ORTHO05D008827 4.8e-10 70.9 73 41.1
QL02p094184 Quercus lobata HOM05D019529 ORTHO05D008827 4.8e-10 70.9 78 39.7
HanXRQChr05g0131701 Helianthus annuus HOM05D019090 ORTHO05D008827 6.3e-10 70.5 99 34.3
ECA234G2497 Erigeron canadensis HOM05D019529 ORTHO05D008827 1.4e-09 69.3 94 37.2
HanXRQChr05g0141581 Helianthus annuus HOM05D019090 ORTHO05D008827 9.1e-09 66.6 99 30.3
Sabra06G0137500 Salix brachista HOM05D037217 ORTHO05D008827 2.6e-08 65.1 70 45.7
AUR62025372 Chenopodium quinoa HOM05D030418 ORTHO05D008827 7.7e-08 63.5 78 38.5
Potri.006G180600 Populus trichocarpa HOM05D037217 ORTHO05D008827 1.0e-07 63.2 75 38.7
EL10Ac8g18908 Beta vulgaris HOM05D030418 ORTHO05D008827 1.3e-07 62.8 78 42.3
AUR62028379 Chenopodium quinoa HOM05D030418 ORTHO05D008827 1.9e-06 58.9 82 36.6
Lalb_Chr17g0340831 Lupinus albus HOM05D001860 ORTHO05D004239 7.2e-06 57.0 77 37.7
Thecc.06G046500 Theobroma cacao HOM05D032892 ORTHO05D008827 9.4e-06 56.6 129 31.0
TWI31G0976 Tripterygium wilfordii HOM05D001860 ORTHO05D004239 9.4e-06 56.6 62 43.5


User provided reference genes

Program Settings