Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016103001 Vitis vinifera HOM05D005382 ORTHO05D006795 6.3e-106 387.5 202 100.0
Hma1.2p1_0329F.1_g127290 Hydrangea macrophylla HOM05D005382 ORTHO05D006795 7.8e-72 274.2 201 71.1
Manes.11G069200 Manihot esculenta HOM05D005382 ORTHO05D006795 4.3e-70 268.5 205 72.2
TAR625G1145 Trochodendron aralioides HOM05D005382 ORTHO05D006795 1.0e-68 263.8 212 67.9
Potri.001G041900 Populus trichocarpa HOM05D005382 ORTHO05D006795 2.3e-68 262.7 192 75.0
Potri.003G184925 Populus trichocarpa HOM05D005382 ORTHO05D006795 8.9e-68 260.8 192 75.0
Thecc.06G046600 Theobroma cacao HOM05D005382 ORTHO05D006795 1.7e-66 256.5 197 71.6
Sabra01G0028700 Salix brachista HOM05D005382 ORTHO05D006795 8.3e-66 254.2 192 74.0
Gorai.007G085500 Gossypium raimondii HOM05D005382 ORTHO05D006795 1.4e-65 253.4 208 67.8
RcHm_v2.0_Chr2g0132311 Rosa chinensis HOM05D005382 ORTHO05D006795 3.2e-65 252.3 193 70.5
FAN05G5289 Fragaria x ananassa HOM05D005382 ORTHO05D006795 4.1e-65 251.9 193 71.0
Nn8g40079 Nelumbo nucifera HOM05D005382 ORTHO05D006795 4.1e-65 251.9 201 68.7
Gohir.A11G075200 Gossypium hirsutum HOM05D005382 ORTHO05D006795 5.4e-65 251.5 208 67.3
CiPaw.01G256500 Carya illinoinensis HOM05D005382 ORTHO05D006795 7.0e-65 251.1 203 69.0
TWI12G1456 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 7.0e-65 251.1 196 69.4
CiPaw.02G163400 Carya illinoinensis HOM05D005382 ORTHO05D006795 9.2e-65 250.8 203 70.0
FvH4_6g28270 Fragaria vesca HOM05D005382 ORTHO05D006795 1.2e-64 250.4 193 70.5
MD17G1226400 Malus domestica HOM05D005382 ORTHO05D006795 1.6e-64 250.0 195 70.3
FAN09G0036 Fragaria x ananassa HOM05D005382 ORTHO05D006795 6.0e-64 248.1 204 67.2
Medtr4g007700 Medicago truncatula HOM05D005382 ORTHO05D006795 6.0e-64 248.1 190 71.1
PGR102G0492 Punica granatum HOM05D005382 ORTHO05D006795 6.0e-64 248.1 203 68.5
MD09G1227600 Malus domestica HOM05D005382 ORTHO05D006795 7.8e-64 247.7 206 66.5
Lalb_Chr25g0278731 Lupinus albus HOM05D005382 ORTHO05D006795 1.0e-63 247.3 197 68.0
Sabra03G0135500 Salix brachista HOM05D005382 ORTHO05D006795 1.0e-63 247.3 198 69.7
Glyma.08G220400 Glycine max HOM05D005382 ORTHO05D006795 1.3e-63 246.9 204 66.7
Nn8g40087 Nelumbo nucifera HOM05D005382 ORTHO05D006795 1.7e-63 246.5 201 67.7
Manes.04G100900 Manihot esculenta HOM05D005382 ORTHO05D006795 2.3e-63 246.1 202 69.3
Eucgr.F03985 Eucalyptus grandis HOM05D005382 ORTHO05D006795 3.0e-63 245.7 198 68.7
Ciclev10026461m.g Citrus clementina HOM05D005382 ORTHO05D006795 3.9e-63 245.4 201 67.7
Nitab4.5_0002700g0060 Nicotiana tabacum HOM05D005382 ORTHO05D006795 8.6e-63 244.2 202 66.3
CAN.G1008.7 Capsicum annuum HOM05D005382 ORTHO05D006795 1.1e-62 243.8 202 64.9
Nitab4.5_0004738g0090 Nicotiana tabacum HOM05D005382 ORTHO05D006795 1.5e-62 243.4 208 65.4
PSO063G0682 Papaver somniferum HOM05D005382 ORTHO05D006795 2.5e-62 242.7 210 67.6
PSO782G0145 Papaver somniferum HOM05D005382 ORTHO05D006795 2.5e-62 242.7 207 68.6
COL.COLO4_26772 Corchorus olitorius HOM05D005382 ORTHO05D006795 4.3e-62 241.9 199 68.3
Dinv21426 Davidia involucrata HOM05D005382 ORTHO05D006795 7.3e-62 241.1 207 66.7
DCAR_021374 Daucus carota HOM05D005382 ORTHO05D006795 1.2e-61 240.4 201 66.2
Lj3g0027435 Lotus japonicus HOM05D005382 ORTHO05D006795 2.1e-61 239.6 202 66.8
FAN14G0578 Fragaria x ananassa HOM05D005382 ORTHO05D006795 2.8e-61 239.2 183 71.0
Cfa001857 Carpinus fangiana HOM05D005382 ORTHO05D006795 3.6e-61 238.8 175 73.7
CDE04G1090 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 4.7e-61 238.4 212 66.0
Gohir.D11G079900 Gossypium hirsutum HOM05D005382 ORTHO05D006795 6.2e-61 238.0 186 69.4
MBI15_g08404_MAGBIO Magnolia biondii HOM05D005382 ORTHO05D006795 8.0e-61 237.7 193 66.8
ECA247G2189 Erigeron canadensis HOM05D005382 ORTHO05D006795 1.1e-60 237.3 189 68.8
Rhsim08G0203100 Rhododendron simsii HOM05D005382 ORTHO05D006795 1.4e-60 236.9 228 60.1
Lsat_1_v5_gn_1_30801 Lactuca sativa HOM05D005382 ORTHO05D006795 1.8e-60 236.5 207 66.7
MSTRG.22842 Avicennia marina HOM05D005382 ORTHO05D006795 4.0e-60 235.3 224 62.1
Glyma.07G021400 Glycine max HOM05D005382 ORTHO05D006795 4.0e-60 235.3 208 63.9
MSTRG.9395 Avicennia marina HOM05D005382 ORTHO05D006795 5.2e-60 235.0 198 67.2
Phvul.008G253200 Phaseolus vulgaris HOM05D005382 ORTHO05D006795 6.8e-60 234.6 202 65.3
CSS0039254 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 8.9e-60 234.2 228 60.5
VMungo0647G2390 Vigna mungo HOM05D005382 ORTHO05D006795 8.9e-60 234.2 204 64.7
Peaxi162Scf00314g01032 Petunia axillaris HOM05D005382 ORTHO05D006795 1.2e-59 233.8 210 61.4
QL05p036845 Quercus lobata HOM05D005382 ORTHO05D006795 2.0e-59 233.0 171 73.7
MELO3C023486.2 Cucumis melo HOM05D005382 ORTHO05D006795 2.6e-59 232.6 197 68.0
Actinidia08935 Actinidia chinensis HOM05D005382 ORTHO05D006795 3.4e-59 232.3 207 63.8
ClCG09G003490 Citrullus lanatus HOM05D005382 ORTHO05D006795 3.4e-59 232.3 197 68.0
ECA232G4196 Erigeron canadensis HOM05D005382 ORTHO05D006795 3.4e-59 232.3 201 67.2
Lalb_Chr01g0011991 Lupinus albus HOM05D005382 ORTHO05D006795 3.4e-59 232.3 197 65.0
Cc04_g05300 Coffea canephora HOM05D005382 ORTHO05D006795 4.4e-59 231.9 196 66.3
Rhsim12G0185400 Rhododendron simsii HOM05D005382 ORTHO05D006795 4.4e-59 231.9 238 58.8
HanXRQChr04g0100021 Helianthus annuus HOM05D005382 ORTHO05D006795 5.8e-59 231.5 195 65.1
CsaV3_7G031710 Cucumis sativus L. HOM05D005382 ORTHO05D006795 1.3e-58 230.3 200 67.0
AUR62032996 Chenopodium quinoa HOM05D005382 ORTHO05D006795 3.7e-58 228.8 198 64.6
Eucgr.J03130 Eucalyptus grandis HOM05D005382 ORTHO05D006795 3.7e-58 228.8 199 63.8
HanXRQChr09g0274181 Helianthus annuus HOM05D005382 ORTHO05D006795 8.3e-58 227.6 191 67.0
TWI75G0559 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 1.1e-57 227.3 174 68.4
Aa31LG4G1250 Aethionema arabicum HOM05D005382 ORTHO05D006795 4.1e-57 225.3 201 65.2
TPR.G3367 Trifolium pratense HOM05D005382 ORTHO05D006795 9.2e-57 224.2 177 70.1
THA.LOC104808172 Tarenaya hassleriana HOM05D005382 ORTHO05D006795 2.7e-56 222.6 204 62.3
Solyc03g117670.4 Solanum lycopersicum HOM05D005382 ORTHO05D006795 7.8e-56 221.1 214 58.9
C06p29630 Brassica napus HOM05D005382 ORTHO05D006795 1.0e-55 220.7 199 63.8
BolC6t38128H Brassica oleracea HOM05D005382 ORTHO05D006795 1.0e-55 220.7 199 63.8
FAN02G4537 Fragaria x ananassa HOM05D005382 ORTHO05D006795 1.0e-55 220.7 174 69.0
A07p26960 Brassica napus HOM05D005382 ORTHO05D006795 1.7e-55 219.9 194 64.9
BraA07t30340Z Brassica rapa HOM05D005382 ORTHO05D006795 1.7e-55 219.9 194 64.9
Sp5g34800 Schrenkiella parvula HOM05D005382 ORTHO05D006795 1.7e-55 219.9 196 63.8
Sed0008280 Sechium edule HOM05D005382 ORTHO05D006795 2.3e-55 219.5 198 63.1
BcaNung04166 Brassica carinata HOM05D005382 ORTHO05D006795 3.0e-55 219.2 194 64.4
Migut.I00626 Erythranthe guttata HOM05D005382 ORTHO05D006795 3.0e-55 219.2 207 62.3
AT1G80940 Arabidopsis thaliana HOM05D005382 ORTHO05D006795 3.9e-55 218.8 208 61.5
BcaB02g07237 Brassica carinata HOM05D005382 ORTHO05D006795 3.9e-55 218.8 195 65.6
Sopen03g036580 Solanum pennellii HOM05D005382 ORTHO05D006795 5.1e-55 218.4 214 58.4
Thhalv10019121m.g Eutrema salsugineum HOM05D005382 ORTHO05D006795 8.6e-55 217.6 202 63.4
SalBow1G1272 Salvia bowleyana HOM05D005382 ORTHO05D006795 8.6e-55 217.6 174 67.8
EL10Ac8g19398 Beta vulgaris HOM05D005382 ORTHO05D006795 1.1e-54 217.2 198 62.6
MSTRG.11221 Avicennia marina HOM05D005382 ORTHO05D006795 1.5e-54 216.9 225 56.9
Carub.0002s2660 Capsella rubella HOM05D005382 ORTHO05D006795 1.9e-54 216.5 193 64.2
AL2G40440 Arabidopsis lyrata HOM05D005382 ORTHO05D006795 4.3e-54 215.3 198 63.1
C06p53570 Brassica napus HOM05D005382 ORTHO05D006795 7.3e-54 214.5 202 62.4
Oeu003125.1 Olea europaea HOM05D005382 ORTHO05D006795 9.5e-54 214.2 172 67.4
Psat7g262200 Pisum sativum HOM05D005382 ORTHO05D006795 9.5e-54 214.2 176 67.0
Haze_16689 Corylus avellana HOM05D005382 ORTHO05D006795 1.2e-53 213.8 149 75.8
vmacro16842 Vaccinium macrocarpon HOM05D005382 ORTHO05D006795 1.6e-53 213.4 191 61.8
A07p44750 Brassica napus HOM05D005382 ORTHO05D006795 2.1e-53 213.0 207 61.4
Sc12g0008250 Simmondsia chinensis HOM05D005382 ORTHO05D006795 2.1e-53 213.0 207 60.9
BcaB02g08711 Brassica carinata HOM05D005382 ORTHO05D006795 2.8e-53 212.6 200 61.5
Lsat_1_v5_gn_4_85061 Lactuca sativa HOM05D005382 ORTHO05D006795 3.6e-53 212.2 199 61.8
BraA07t31983Z Brassica rapa HOM05D005382 ORTHO05D006795 4.7e-53 211.8 207 61.4
SGA_v2.0_scaffold74G24593 Striga asiatica HOM05D005382 ORTHO05D006795 1.1e-52 210.7 193 60.1
Lj5A81T85 Lonicera japonica HOM05D005382 ORTHO05D006795 1.4e-52 210.3 188 63.3
BcaC08g47533 Brassica carinata HOM05D005382 ORTHO05D006795 1.8e-52 209.9 210 60.5
BolC6t40373H Brassica oleracea HOM05D005382 ORTHO05D006795 1.8e-52 209.9 210 60.5
Oeu051555.1 Olea europaea HOM05D005382 ORTHO05D006795 3.1e-52 209.1 154 70.8
ATR0580G392 Amborella trichopoda HOM05D005382 ORTHO05D006795 5.2e-52 208.4 197 64.5
SGA_v2.0_scaffold515G52664 Striga asiatica HOM05D003096 ORTHO05D003521 5.2e-52 208.4 189 63.5
Prupe.3G103600 Prunus persica HOM05D005382 ORTHO05D006795 1.5e-51 206.8 145 75.9
Duzib192G0805 Durio zibethinus HOM05D005382 ORTHO05D006795 3.4e-51 205.7 152 72.4
CARHR073510 Cardamine hirsuta HOM05D005382 ORTHO05D006795 1.1e-49 200.7 175 64.6
Duzib235G0288 Durio zibethinus HOM05D005382 ORTHO05D006795 1.1e-49 200.7 166 69.3
HPP92_010348 Vanilla planifolia HOM05D005382 ORTHO05D006795 1.9e-49 199.9 205 57.1
AUR62034069 Chenopodium quinoa HOM05D007611 ORTHO05D006795 2.4e-49 199.5 177 63.8
Os02g0793900 Oryza sativa ssp. japonica HOM05D005382 ORTHO05D006795 1.2e-48 197.2 191 60.7
CDE07G1687 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 2.7e-48 196.1 135 76.3
arahy.Tifrunner.gnm1.ann1.HUQR60 Arachis hypogaea HOM05D005382 ORTHO05D006795 3.9e-47 192.2 206 56.8
PGSC0003DMG400014155 Solanum tuberosum HOM05D005382 ORTHO05D006795 3.9e-47 192.2 142 69.0
arahy.Tifrunner.gnm1.ann1.7IZ6IW Arachis hypogaea HOM05D005382 ORTHO05D006795 1.5e-46 190.3 206 56.3
Zm00001eb257680 Zea mays HOM05D005382 ORTHO05D006795 5.6e-46 188.3 191 56.0
CANSAT56G2690 Cannabis sativa HOM05D005382 ORTHO05D006795 6.8e-44 181.4 183 57.4
SEGI_41275 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 2.6e-43 179.5 129 71.3
Cpa.g.c28380.1 Carica papaya HOM05D005382 ORTHO05D006795 7.6e-43 177.9 148 66.2
SMO145G0139 Selaginella moellendorffii HOM05D005382 ORTHO05D006795 1.2e-40 170.6 136 64.7
Mapoly0128s0009 Marchantia polymorpha HOM05D005382 ORTHO05D006795 6.0e-40 168.3 145 62.8
Ah.14g085670 Amaranthus hybridus HOM05D005382 ORTHO05D006795 1.7e-39 166.8 198 52.5
Pp3c16_25700 Physcomitrium patens HOM05D005382 ORTHO05D006795 1.5e-38 163.7 132 65.2
Pp3c25_9780 Physcomitrium patens HOM05D005382 ORTHO05D006795 4.3e-38 162.2 141 63.8
Hund12559 Selenicereus undatus HOM05D005382 ORTHO05D006795 1.1e-33 147.5 134 61.2
Atru.chr1.2804_Atru.chr1.2805 Acer truncatum HOM05D005382 ORTHO05D006795 2.4e-33 146.4 203 50.7
SEGI_02613 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 1.9e-30 136.7 118 61.0
CSS0015514 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 2.5e-30 136.3 127 60.6
Actinidia36864 Actinidia chinensis HOM05D005382 ORTHO05D006795 6.9e-28 128.3 198 45.5
BcaB07g33703 Brassica carinata HOM05D005382 ORTHO05D006795 4.9e-26 122.1 131 55.7
unitig_22.g6275 Utricularia gibba HOM05D005382 ORTHO05D006795 5.6e-22 108.6 77 71.4
BcaB07g33704 Brassica carinata HOM05D005382 ORTHO05D006795 5.8e-19 98.6 63 79.4
BcaB07g33705 Brassica carinata HOM05D005382 ORTHO05D006795 5.8e-19 98.6 63 79.4
Actinidia26580 Actinidia chinensis HOM05D005382 ORTHO05D006795 4.6e-16 89.0 68 69.1
AagrBONN_evm.TU.Sc2ySwM_117.2014 Anthoceros agrestis HOM05D005382 ORTHO05D006795 6.0e-16 88.6 72 68.1
TPR.G1583 Trifolium pratense HOM05D005382 ORTHO05D006795 1.4e-09 67.4 45 75.6
Actinidia26581 Actinidia chinensis HOM05D005382 ORTHO05D054410 3.2e-09 66.2 130 39.2


User provided reference genes

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