Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 2.4e-122 442.2 227 100.0
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 3.0e-32 142.9 102 73.5
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 3.0e-32 142.9 101 71.3
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 1.5e-31 140.6 101 73.3
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 2.9e-27 126.3 99 67.7
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 3.8e-27 125.9 104 64.4
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 6.5e-27 125.2 102 71.6
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 6.5e-27 125.2 99 67.7
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 1.5e-26 124.0 105 66.7
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 1.5e-26 124.0 104 63.5
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 1.9e-26 123.6 99 66.7
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 1.9e-26 123.6 104 65.4
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 1.9e-26 123.6 105 65.7
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 1.9e-26 123.6 103 71.8
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 1.9e-26 123.6 99 65.7
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.9e-26 123.6 102 70.6
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 2.5e-26 123.2 103 71.8
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 2.5e-26 123.2 104 61.5
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 2.5e-26 123.2 103 71.8
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.5e-26 123.2 102 71.6
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 2.5e-26 123.2 99 67.7
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 4.2e-26 122.5 105 64.8
CsaV3_7G031790 Cucumis sativus L. HOM05D003613 ORTHO05D004055 5.5e-26 122.1 137 56.2
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 5.5e-26 122.1 102 63.7
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 5.5e-26 122.1 104 61.5
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 7.2e-26 121.7 98 65.3
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 7.2e-26 121.7 102 66.7
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 7.2e-26 121.7 102 69.6
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 7.2e-26 121.7 102 69.6
CiPaw.01G052100 Carya illinoinensis HOM05D003613 ORTHO05D004055 9.4e-26 121.3 102 68.6
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 9.4e-26 121.3 115 61.7
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.2e-25 120.9 102 68.6
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 1.2e-25 120.9 102 61.8
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 1.6e-25 120.6 102 66.7
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 1.6e-25 120.6 102 67.6
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 2.1e-25 120.2 100 66.0
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 2.7e-25 119.8 104 63.5
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 6.1e-25 118.6 97 66.0
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 6.1e-25 118.6 97 61.9
RcHm_v2.0_Chr2g0131951 Rosa chinensis HOM05D003613 ORTHO05D004055 6.1e-25 118.6 102 67.6
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 6.1e-25 118.6 104 59.6
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 8.0e-25 118.2 103 68.0
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 8.0e-25 118.2 101 61.4
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 8.0e-25 118.2 132 51.5
Potri.003G186400 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.0e-24 117.9 102 67.6
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 1.4e-24 117.5 103 68.0
Haze_15237 Corylus avellana HOM05D003613 ORTHO05D004055 1.8e-24 117.1 102 67.6
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 2.3e-24 116.7 105 64.8
MELO3C029246.2 Cucumis melo HOM05D003613 ORTHO05D004055 3.0e-24 116.3 106 65.1
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 3.0e-24 116.3 99 60.6
Sed0012530 Sechium edule HOM05D003613 ORTHO05D004055 3.0e-24 116.3 104 67.3
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 3.0e-24 116.3 100 64.0
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 3.0e-24 116.3 105 63.8
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 3.0e-24 116.3 102 67.6
Cfa004173 Carpinus fangiana HOM05D003613 ORTHO05D004055 4.0e-24 115.9 102 67.6
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 4.0e-24 115.9 104 67.3
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 5.2e-24 115.5 101 60.4
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 5.2e-24 115.5 101 67.3
Haze_16413 Corylus avellana HOM05D003613 ORTHO05D004055 6.8e-24 115.2 102 66.7
Haze_16416 Corylus avellana HOM05D003613 ORTHO05D004055 6.8e-24 115.2 102 66.7
EL10Ac5g12047 Beta vulgaris HOM05D003613 ORTHO05D004055 8.8e-24 114.8 112 62.5
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 2.0e-23 113.6 96 64.6
Sed0006875 Sechium edule HOM05D003613 ORTHO05D004055 2.0e-23 113.6 103 66.0
VMungo0540G1949 Vigna mungo HOM05D003613 ORTHO05D004055 2.0e-23 113.6 104 60.6
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 2.6e-23 113.2 106 63.2
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 2.6e-23 113.2 105 60.0
FAN02G4453 Fragaria x ananassa HOM05D003613 ORTHO05D004055 3.4e-23 112.8 94 66.0
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 3.4e-23 112.8 99 66.7
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 4.4e-23 112.5 103 66.0
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 5.7e-23 112.1 100 63.0
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 7.5e-23 111.7 97 58.8
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 9.8e-23 111.3 101 63.4
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 9.8e-23 111.3 74 83.8
Potri.001G039700 Populus trichocarpa HOM05D003613 ORTHO05D004055 1.7e-22 110.5 82 70.7
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 2.2e-22 110.2 100 67.0
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 2.8e-22 109.8 96 63.5
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 2.8e-22 109.8 104 58.7
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 2.8e-22 109.8 102 62.7
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 2.8e-22 109.8 101 60.4
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 2.8e-22 109.8 99 62.6
Phvul.006G195900 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 3.7e-22 109.4 101 60.4
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 4.9e-22 109.0 101 63.4
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 8.3e-22 108.2 101 59.4
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 8.3e-22 108.2 102 63.7
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 8.3e-22 108.2 102 63.7
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 1.1e-21 107.8 102 60.8
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 1.1e-21 107.8 101 59.4
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 1.1e-21 107.8 93 66.7
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 1.8e-21 107.1 104 65.4
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.8e-21 107.1 102 62.7
Ca_00210_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 2.4e-21 106.7 101 60.4
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 3.1e-21 106.3 103 59.2
MD17G1228300 Malus domestica HOM05D003613 ORTHO05D004055 4.1e-21 105.9 101 61.4
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 5.4e-21 105.5 103 58.3
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 5.4e-21 105.5 93 58.1
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 9.1e-21 104.8 100 59.0
Sed0021976 Sechium edule HOM05D003613 ORTHO05D004055 9.1e-21 104.8 102 59.8
SEGI_37804 Sequoiadendron giganteum HOM05D003613 ORTHO05D004055 9.1e-21 104.8 104 57.7
Medtr2g010880 Medicago truncatula HOM05D003613 ORTHO05D004055 1.2e-20 104.4 101 59.4
Sabra03G0136500 Salix brachista HOM05D003613 ORTHO05D004055 1.2e-20 104.4 108 59.3
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 1.2e-20 104.4 103 58.3
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 1.6e-20 104.0 103 58.3
TPR.G32634 Trifolium pratense HOM05D003613 ORTHO05D004055 1.6e-20 104.0 100 61.0
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 2.0e-20 103.6 100 63.0
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 2.7e-20 103.2 107 58.9
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 2.7e-20 103.2 106 57.5
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 3.5e-20 102.8 107 58.9
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 3.5e-20 102.8 107 58.9
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 3.5e-20 102.8 103 62.1
Zm00001eb177920 Zea mays HOM05D003613 ORTHO05D004055 4.5e-20 102.4 99 57.6
Lj6g0025627 Lotus japonicus HOM05D003613 ORTHO05D004055 5.9e-20 102.1 101 56.4
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 7.7e-20 101.7 87 67.8
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 7.7e-20 101.7 100 63.0
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 7.7e-20 101.7 103 61.2
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 1.0e-19 101.3 87 67.8
ATR0068G040 Amborella trichopoda HOM05D003613 ORTHO05D004055 1.3e-19 100.9 103 57.3
arahy.Tifrunner.gnm1.ann1.T22GZM Arachis hypogaea HOM05D003613 ORTHO05D004055 1.3e-19 100.9 85 60.0
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 1.7e-19 100.5 88 62.5
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 2.3e-19 100.1 103 55.3
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 2.9e-19 99.8 103 56.3
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 3.8e-19 99.4 103 60.2
Glyma.15G176700 Glycine max HOM05D003613 ORTHO05D004055 5.0e-19 99.0 101 56.4
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 5.0e-19 99.0 106 57.5
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 8.6e-19 98.2 106 60.4
arahy.Tifrunner.gnm1.ann1.DB50AT Arachis hypogaea HOM05D003613 ORTHO05D004055 8.6e-19 98.2 119 47.9
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 8.6e-19 98.2 103 59.2
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 8.6e-19 98.2 87 64.4
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 8.6e-19 98.2 101 54.5
Psat1g210880 Pisum sativum HOM05D003613 ORTHO05D004055 1.5e-18 97.4 101 56.4
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 1.9e-18 97.1 104 57.7
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 1.9e-18 97.1 104 57.7
Glyma.07G187000 Glycine max HOM05D003613 ORTHO05D004055 2.5e-18 96.7 98 57.1
Glyma.08G062200 Glycine max HOM05D003613 ORTHO05D004055 2.5e-18 96.7 98 59.2
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 4.3e-18 95.9 100 58.0
QL10p043081 Quercus lobata HOM05D003613 ORTHO05D004055 4.3e-18 95.9 100 61.0
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 5.6e-18 95.5 104 58.7
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 5.6e-18 95.5 103 58.3
Zm00001eb412000 Zea mays HOM05D003613 ORTHO05D004055 7.2e-18 95.1 100 56.0
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 9.5e-18 94.7 102 54.9
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 1.2e-17 94.4 103 57.3
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 1.2e-17 94.4 103 56.3
arahy.Tifrunner.gnm1.ann1.M9YY7V Arachis hypogaea HOM05D003613 ORTHO05D004055 1.6e-17 94.0 104 51.0
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 2.1e-17 93.6 103 57.3
arahy.Tifrunner.gnm1.ann1.XPM13Z Arachis hypogaea HOM05D003613 ORTHO05D004055 3.6e-17 92.8 80 58.8
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 4.7e-17 92.4 104 55.8
FAN14G0884 Fragaria x ananassa HOM05D008004 ORTHO05D004055 8.0e-17 91.7 81 67.9
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 1.0e-16 91.3 87 63.2
DCAR_021377 Daucus carota HOM05D003613 ORTHO05D004055 1.8e-16 90.5 87 52.9
Phvul.002G218400 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 2.3e-16 90.1 98 52.0
Gohir.D09G076100 Gossypium hirsutum HOM05D003613 ORTHO05D004055 3.0e-16 89.7 101 49.5
Gorai.006G091300 Gossypium raimondii HOM05D003613 ORTHO05D004055 6.8e-16 88.6 101 49.5
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 1.2e-15 87.8 104 56.7
Ca_18450_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 1.5e-15 87.4 99 51.5
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 2.0e-15 87.0 104 53.8
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 2.0e-15 87.0 104 53.8
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 2.0e-15 87.0 104 53.8
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 2.0e-15 87.0 104 53.8
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 2.0e-15 87.0 100 55.0
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 2.6e-15 86.7 104 54.8
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 2.6e-15 86.7 104 54.8
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 2.6e-15 86.7 104 54.8
FvH4_6g28090 Fragaria vesca HOM05D008004 ORTHO05D011218 2.6e-15 86.7 73 67.1
Gohir.A09G076160 Gossypium hirsutum HOM05D003613 ORTHO05D004055 2.6e-15 86.7 101 48.5
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 3.4e-15 86.3 74 66.2
Lj4g0025384 Lotus japonicus HOM05D003613 ORTHO05D004055 3.4e-15 86.3 99 52.5
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 9.8e-15 84.7 107 52.3
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 9.8e-15 84.7 107 52.3
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 2.9e-14 83.2 86 60.5
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 2.9e-14 83.2 86 60.5
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 2.9e-14 83.2 86 60.5
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 1.8e-13 80.5 97 55.7
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 3.2e-13 79.7 95 52.6
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 9.2e-13 78.2 76 61.8
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 2.0e-12 77.0 76 60.5
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 2.0e-12 77.0 76 60.5
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 2.7e-12 76.6 76 52.6
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 5.9e-12 75.5 76 59.2
arahy.Tifrunner.gnm1.ann1.LI0G0T Arachis hypogaea HOM05D003613 ORTHO05D004055 1.5e-10 70.9 69 56.5
Nitab4.5_0002302g0110 Nicotiana tabacum HOM05D003613 ORTHO05D004055 1.5e-10 70.9 63 66.7
DCAR_021376 Daucus carota HOM05D003613 ORTHO05D004055 5.6e-10 68.9 76 53.9
SMO001G0027 Selaginella moellendorffii HOM05D003613 ORTHO05D004055 1.2e-09 67.8 98 44.9
Pp3c10_10840 Physcomitrium patens HOM05D003613 ORTHO05D004055 4.7e-09 65.9 88 47.7
SMO307G0037 Selaginella moellendorffii HOM05D000818 ORTHO05D004055 4.7e-09 65.9 98 43.9
Pp3c14_25540 Physcomitrium patens HOM05D003613 ORTHO05D004055 6.8e-08 62.0 86 45.3
AagrBONN_evm.TU.Sc2ySwM_368.2820 Anthoceros agrestis HOM05D003613 ORTHO05D004055 9.8e-07 58.2 48 54.2
Mapoly0033s0168 Marchantia polymorpha HOM05D000087 ORTHO05D255883 8.3e-06 55.1 91 40.7


User provided reference genes

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