Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016031001 Vitis vinifera HOM05D000408 ORTHO05D440623 1.6e-16 88.2 42 100.0
GSVIVG01016044001 Vitis vinifera HOM05D000408 ORTHO05D440381 4.8e-16 86.7 42 97.6
GSVIVG01013532001 Vitis vinifera HOM05D000408 ORTHO05D001664 2.2e-13 77.8 40 90.0
Peaxi162Scf00071g00827 Petunia axillaris HOM05D000408 ORTHO05D001664 1.6e-11 71.6 41 80.5
Nitab4.5_0003445g0030 Nicotiana tabacum HOM05D000408 ORTHO05D001664 1.0e-10 68.9 41 75.6
Nitab4.5_0001937g0030 Nicotiana tabacum HOM05D000408 ORTHO05D001664 3.0e-10 67.4 41 73.2
CAN.G56.20 Capsicum annuum HOM05D000408 ORTHO05D001664 5.1e-10 66.6 40 75.0
vmacro12693 Vaccinium macrocarpon HOM05D000408 ORTHO05D001664 5.1e-10 66.6 40 72.5
CSS0009508 Camellia sinensis var. sinensis HOM05D000408 ORTHO05D001664 6.7e-10 66.2 40 72.5
CSS0027830 Camellia sinensis var. sinensis HOM05D000408 ORTHO05D001664 6.7e-10 66.2 40 72.5
Nn2g14892 Nelumbo nucifera HOM05D000408 ORTHO05D001664 1.5e-09 65.1 38 73.7
Hma1.2p1_1396F.1_g280610 Hydrangea macrophylla HOM05D000408 ORTHO05D001664 4.3e-09 63.5 40 70.0
Lj9A655T35 Lonicera japonica HOM05D000408 ORTHO05D001664 4.3e-09 63.5 40 67.5
Actinidia02260 Actinidia chinensis HOM05D000408 ORTHO05D001664 7.4e-09 62.8 40 67.5
Dinv09266 Davidia involucrata HOM05D000408 ORTHO05D001664 7.4e-09 62.8 40 72.5
Migut.N01836 Erythranthe guttata HOM05D000408 ORTHO05D001664 7.4e-09 62.8 41 65.9
Migut.O00504 Erythranthe guttata HOM05D000408 ORTHO05D001664 7.4e-09 62.8 41 65.9
EL10Ac2g02819 Beta vulgaris HOM05D000408 ORTHO05D001664 9.6e-09 62.4 39 71.8
MBI13_g01618_MAGBIO Magnolia biondii HOM05D000408 ORTHO05D001664 9.6e-09 62.4 41 63.4
CDE08G1428 Ceratophyllum demersum HOM05D000408 ORTHO05D001664 1.6e-08 61.6 39 71.8
Rhsim01G0123900 Rhododendron simsii HOM05D000408 ORTHO05D001664 1.6e-08 61.6 40 67.5
COL.COLO4_06878 Corchorus olitorius HOM05D000408 ORTHO05D001664 2.1e-08 61.2 39 71.8
Medtr3g017500 Medicago truncatula HOM05D000408 ORTHO05D001664 2.1e-08 61.2 39 64.1
Oeu003927.1 Olea europaea HOM05D000408 ORTHO05D001664 2.1e-08 61.2 41 65.9
Aqoxy1G00345 Aquilegia oxysepala HOM05D000408 ORTHO05D001664 2.8e-08 60.8 41 68.3
AUR62026850 Chenopodium quinoa HOM05D000408 ORTHO05D001664 2.8e-08 60.8 39 71.8
Solyc08g043140.4 Solanum lycopersicum HOM05D000408 ORTHO05D001664 2.8e-08 60.8 40 67.5
Sopen08g012840 Solanum pennellii HOM05D000408 ORTHO05D001664 2.8e-08 60.8 40 67.5
Gohir.A05G281300 Gossypium hirsutum HOM05D000408 ORTHO05D001664 3.7e-08 60.5 39 69.2
Gorai.009G296900 Gossypium raimondii HOM05D000408 ORTHO05D001664 3.7e-08 60.5 39 69.2
unitig_746.g26842 Utricularia gibba HOM05D000408 ORTHO05D001664 3.7e-08 60.5 40 67.5
AUR62037199 Chenopodium quinoa HOM05D000408 ORTHO05D001664 4.8e-08 60.1 39 71.8
Atru.chr12.1390 Acer truncatum HOM05D000408 ORTHO05D001664 6.2e-08 59.7 39 71.8
Gohir.D05G283044 Gossypium hirsutum HOM05D000408 ORTHO05D001664 6.2e-08 59.7 39 69.2
PGSC0003DMG400026658 Solanum tuberosum HOM05D000408 ORTHO05D001664 6.2e-08 59.7 40 67.5
DCAR_003246 Daucus carota HOM05D000408 ORTHO05D001664 8.2e-08 59.3 39 66.7
Lj7A581G47 Lonicera japonica HOM05D000408 ORTHO05D001664 8.2e-08 59.3 40 65.0
CDE09G1106 Ceratophyllum demersum HOM05D000408 ORTHO05D001664 1.1e-07 58.9 39 69.2
Duzib114G1021 Durio zibethinus HOM05D000408 ORTHO05D001664 1.1e-07 58.9 39 66.7
PSO339G3728 Papaver somniferum HOM05D000408 ORTHO05D001664 1.1e-07 58.9 41 58.5
PSO384G3450 Papaver somniferum HOM05D000408 ORTHO05D001664 1.1e-07 58.9 41 58.5
SGA_v2.0_scaffold232G43507 Striga asiatica HOM05D000408 ORTHO05D001664 1.1e-07 58.9 41 61.0
ECA234G4072 Erigeron canadensis HOM05D000015 ORTHO05D004741 1.4e-07 58.5 37 73.0
PGR031G2038 Punica granatum HOM05D000408 ORTHO05D001664 1.4e-07 58.5 39 66.7
Thecc.10G162900 Theobroma cacao HOM05D000408 ORTHO05D001664 1.4e-07 58.5 39 66.7
Hund15729 Selenicereus undatus HOM05D000408 ORTHO05D001664 1.8e-07 58.2 39 66.7
THA.LOC104826722 Tarenaya hassleriana HOM05D000408 ORTHO05D001664 1.8e-07 58.2 37 67.6
Ah.10g030610 Amaranthus hybridus HOM05D000408 ORTHO05D001664 3.1e-07 57.4 38 71.1
Glyma.13G198600 Glycine max HOM05D000408 ORTHO05D001664 4.0e-07 57.0 39 66.7
Potri.001G026400 Populus trichocarpa HOM05D000408 ORTHO05D001664 4.0e-07 57.0 39 66.7
ATR0745G029 Amborella trichopoda HOM05D000408 ORTHO05D001664 5.3e-07 56.6 41 61.0
Eucgr.J01190 Eucalyptus grandis HOM05D000408 ORTHO05D001664 5.3e-07 56.6 39 64.1
Glyma.15G236900 Glycine max HOM05D000408 ORTHO05D001664 5.3e-07 56.6 39 66.7
HanXRQChr04g0119561 Helianthus annuus HOM05D000408 ORTHO05D001664 5.3e-07 56.6 40 65.0
SGA_v2.0_scaffold43G16303 Striga asiatica HOM05D000408 ORTHO05D001664 5.3e-07 56.6 41 58.5
Cc00_g06920 Coffea canephora HOM05D000408 ORTHO05D001664 6.9e-07 56.2 40 62.5
Haze_03072 Corylus avellana HOM05D000408 ORTHO05D001664 6.9e-07 56.2 39 66.7
DCAR_001916 Daucus carota HOM05D000408 ORTHO05D001664 6.9e-07 56.2 39 64.1
Lsat_1_v5_gn_7_31061 Lactuca sativa HOM05D000408 ORTHO05D001664 6.9e-07 56.2 39 66.7
Phvul.011G207700 Phaseolus vulgaris HOM05D000408 ORTHO05D001664 9.0e-07 55.8 39 64.1
Psat5g219560 Pisum sativum HOM05D000408 ORTHO05D001664 9.0e-07 55.8 39 59.0
QL04p014546 Quercus lobata HOM05D000408 ORTHO05D001664 9.0e-07 55.8 39 59.0
QL04p014908 Quercus lobata HOM05D000408 ORTHO05D001664 9.0e-07 55.8 39 59.0
SalBow6G6494 Salvia bowleyana HOM05D000408 ORTHO05D001664 9.0e-07 55.8 39 59.0
Sc10g0004380 Simmondsia chinensis HOM05D000408 ORTHO05D001664 9.0e-07 55.8 37 70.3
Duzib106G1707 Durio zibethinus HOM05D000408 ORTHO05D001664 1.2e-06 55.5 39 64.1
Lsat_1_v5_gn_4_30001 Lactuca sativa HOM05D000408 ORTHO05D001664 1.2e-06 55.5 39 64.1
Sabra03G0147700 Salix brachista HOM05D000121 ORTHO05D000102 1.2e-06 55.5 40 62.5
TWI63G1687 Tripterygium wilfordii HOM05D000408 ORTHO05D001664 1.2e-06 55.5 37 64.9
Lalb_Chr19g0132371 Lupinus albus HOM05D000408 ORTHO05D001664 1.5e-06 55.1 39 64.1
Manes.04G165900 Manihot esculenta HOM05D000408 ORTHO05D001664 1.5e-06 55.1 39 59.0
HPP92_003588 Vanilla planifolia HOM05D000408 ORTHO05D001664 1.5e-06 55.1 38 60.5
VMungo1080G0685 Vigna mungo HOM05D000408 ORTHO05D001664 1.5e-06 55.1 39 64.1
MSTRG.16990 Avicennia marina HOM05D000408 ORTHO05D001664 2.0e-06 54.7 41 56.1
CiPaw.14G006900 Carya illinoinensis HOM05D000408 ORTHO05D001664 2.0e-06 54.7 39 61.5
ECA236G3053 Erigeron canadensis HOM05D000408 ORTHO05D001664 2.0e-06 54.7 39 66.7
HanXRQChr16g0525031 Helianthus annuus HOM05D000408 ORTHO05D001664 2.0e-06 54.7 38 65.8
Cpa.g.sc223.8 Carica papaya HOM05D000408 ORTHO05D001664 2.6e-06 54.3 38 63.2
Lalb_Chr03g0032821 Lupinus albus HOM05D000408 ORTHO05D001664 2.6e-06 54.3 39 64.1
THA.LOC104825591 Tarenaya hassleriana HOM05D000408 ORTHO05D001664 2.6e-06 54.3 37 64.9
Migut.B01221 Erythranthe guttata HOM05D000408 ORTHO05D001664 3.4e-06 53.9 41 53.7
Glyma.04G141600 Glycine max HOM05D000408 ORTHO05D001664 3.4e-06 53.9 38 63.2
Gohir.D10G190400 Gossypium hirsutum HOM05D000408 ORTHO05D001664 3.4e-06 53.9 39 61.5
Gorai.011G213500 Gossypium raimondii HOM05D000408 ORTHO05D001664 3.4e-06 53.9 39 61.5
Potri.003G198301 Populus trichocarpa HOM05D000408 ORTHO05D001664 3.4e-06 53.9 39 64.1
Potri.T125706 Populus trichocarpa HOM05D000408 ORTHO05D001664 3.4e-06 53.9 39 64.1
SalBow5G3351 Salvia bowleyana HOM05D000408 ORTHO05D001664 3.4e-06 53.9 40 55.0
SalBow5G4931 Salvia bowleyana HOM05D000408 ORTHO05D001664 3.4e-06 53.9 40 55.0
FAN10G1675 Fragaria x ananassa HOM05D000408 ORTHO05D001664 4.5e-06 53.5 38 63.2
Glyma.11G154100 Glycine max HOM05D000408 ORTHO05D001664 4.5e-06 53.5 38 63.2
PGR044G2593 Punica granatum HOM05D000408 ORTHO05D001664 4.5e-06 53.5 40 60.0
RcHm_v2.0_Chr1g0323271 Rosa chinensis HOM05D000408 ORTHO05D001664 4.5e-06 53.5 38 63.2
unitig_22.g5426 Utricularia gibba HOM05D000408 ORTHO05D001664 4.5e-06 53.5 41 58.5
Gohir.A10G183400 Gossypium hirsutum HOM05D000408 ORTHO05D001664 5.8e-06 53.1 39 59.0
MD02G1289600 Malus domestica HOM05D000408 ORTHO05D001664 5.8e-06 53.1 39 61.5
TPR.G17813 Trifolium pratense HOM05D000408 ORTHO05D001664 5.8e-06 53.1 39 56.4
arahy.Tifrunner.gnm1.ann1.Q7WFM2 Arachis hypogaea HOM05D000408 ORTHO05D001664 7.6e-06 52.8 39 61.5
MELO3C005121.2 Cucumis melo HOM05D000408 ORTHO05D001664 7.6e-06 52.8 38 63.2
TWI15G0145 Tripterygium wilfordii HOM05D000408 ORTHO05D001664 7.6e-06 52.8 37 59.5
VMungo1127G0120 Vigna mungo HOM05D000408 ORTHO05D001664 7.6e-06 52.8 39 59.0
CsaV3_5G036680 Cucumis sativus L. HOM05D000408 ORTHO05D001664 1.0e-05 52.4 39 61.5
FAN01G1841 Fragaria x ananassa HOM05D000408 ORTHO05D001664 1.0e-05 52.4 38 60.5


User provided reference genes

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