Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01016018001 Vitis vinifera HOM05D000388 ORTHO05D004227 1.1e-49 199.5 93 100.0
A06p23270 Brassica napus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
BNapus_Darmor_BZH_scaffold_253p00140 Brassica napus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
C09p29540 Brassica napus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Thhalv10011045m.g Eutrema salsugineum HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund08563 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund18038 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund19311 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund24075 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund27448 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund27566 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund27604 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund27660 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund27703 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund27748 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund27759 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund27801 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund27912 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28002 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28023 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28030 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28054 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28089 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28096 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28119 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28135 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28158 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28166 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28193 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28204 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28242 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28284 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28296 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28340 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28347 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28357 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28368 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28381 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28393 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28409 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28444 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28551 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28582 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28622 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28693 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund28727 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund29031 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund29057 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund29134 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund29411 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund29624 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund29675 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund29906 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund29948 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund30487 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund31284 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund31288 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-29 132.5 91 73.6
Hund15468 Selenicereus undatus HOM05D000388 ORTHO05D004227 2.2e-29 132.1 91 72.5
BNapus_Darmor_BZH_scaffold_287p00050 Brassica napus HOM05D000388 ORTHO05D004227 3.7e-29 131.3 91 71.4
Medtr4g051210 Medicago truncatula HOM05D000388 ORTHO05D004227 3.7e-29 131.3 91 72.5
VMungo1127G1446 Vigna mungo HOM05D000388 ORTHO05D000473 3.7e-29 131.3 91 72.5
HanXRQChr14g0430581 Helianthus annuus HOM05D000388 ORTHO05D004227 4.9e-29 131.0 91 72.5
LjContig00318g0022419 Lotus japonicus HOM05D000388 ORTHO05D004227 4.9e-29 131.0 91 71.4
MELO3C027351.2 Cucumis melo HOM05D000388 ORTHO05D004227 8.3e-29 130.2 87 73.6
EL10As20g24206 Beta vulgaris HOM05D000388 ORTHO05D004227 1.1e-28 129.8 91 72.5
AL2G21390 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
ATCG00360 Arabidopsis thaliana HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
BolSC29t60457H Brassica oleracea HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
BolSC45t60867H Brassica oleracea HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
BraA06t25429Z Brassica rapa HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
BraSC151t45710Z Brassica rapa HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
BraSC179t45799Z Brassica rapa HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
CARHR282020 Cardamine hirsuta HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Ciclev10004110m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Ciclev10010876m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Ciclev10027634m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Ciclev10027655m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Ciclev10030462m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Ciclev10030468m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Migut.D01425 Erythranthe guttata HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Gohir.A10G100300 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
HanXRQChr16g0522541 Helianthus annuus HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Hma1.2p1_0248F.1_g102150 Hydrangea macrophylla HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Lalb_Chr23g0274721 Lupinus albus HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Prupe.1G271000 Prunus persica HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Hund19306 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Hund27844 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Hund31434 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Solyc00g500058.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
Solyc00g500210.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.4e-28 129.4 64 95.3
C04p63050 Brassica napus HOM05D000388 ORTHO05D004227 4.1e-28 127.9 64 93.8
Lj2P1237T81 Lonicera japonica HOM05D000388 ORTHO05D004227 4.1e-28 127.9 64 93.8
Lj2P1238T36 Lonicera japonica HOM05D000388 ORTHO05D004227 4.1e-28 127.9 64 93.8
Lj2P1239T100 Lonicera japonica HOM05D000388 ORTHO05D004227 4.1e-28 127.9 64 93.8
Lj2P1239T175 Lonicera japonica HOM05D000388 ORTHO05D004227 4.1e-28 127.9 64 93.8
QL93p0270_0008 Quercus lobata HOM05D000388 ORTHO05D004227 5.4e-28 127.5 64 93.8
BolC7t41724H Brassica oleracea HOM05D000388 ORTHO05D004227 7.1e-28 127.1 64 93.8
HanXRQChr02g0041451 Helianthus annuus HOM05D000388 ORTHO05D004227 7.1e-28 127.1 88 72.7
HanXRQChr08g0210281 Helianthus annuus HOM05D000388 ORTHO05D004227 7.1e-28 127.1 88 72.7
HanXRQChr11g0326711 Helianthus annuus HOM05D000388 ORTHO05D004227 7.1e-28 127.1 88 72.7
HanXRQChr14g0460931 Helianthus annuus HOM05D000388 ORTHO05D004227 7.1e-28 127.1 88 72.7
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 7.1e-28 127.1 88 72.7
Nn055s41933 Nelumbo nucifera HOM05D000388 ORTHO05D004227 7.1e-28 127.1 64 93.8
Solyc00g500145.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 9.2e-28 126.7 63 95.2
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 1.6e-27 125.9 61 96.7
HanXRQChr02g0044971 Helianthus annuus HOM05D000388 ORTHO05D004227 1.6e-27 125.9 61 96.7
HanXRQChr07g0201031 Helianthus annuus HOM05D000388 ORTHO05D004227 1.6e-27 125.9 61 96.7
HanXRQChr10g0289191 Helianthus annuus HOM05D000388 ORTHO05D004227 1.6e-27 125.9 61 96.7
HanXRQChr13g0413551 Helianthus annuus HOM05D000388 ORTHO05D004227 1.6e-27 125.9 61 96.7
Lsat_1_v5_gn_5_105761 Lactuca sativa HOM05D000388 ORTHO05D004227 1.6e-27 125.9 61 96.7
Lsat_1_v5_gn_5_58041 Lactuca sativa HOM05D000388 ORTHO05D004227 1.6e-27 125.9 61 96.7
Sed0002050 Sechium edule HOM05D000388 ORTHO05D004227 1.6e-27 125.9 64 92.2
Sed0007112 Sechium edule HOM05D000388 ORTHO05D004227 1.6e-27 125.9 64 92.2
Sed0019997 Sechium edule HOM05D000388 ORTHO05D004227 1.6e-27 125.9 64 92.2
BolSC29t60580H Brassica oleracea HOM05D000388 ORTHO05D004227 2.7e-27 125.2 62 95.2
BolSC45t60945H Brassica oleracea HOM05D000388 ORTHO05D004227 2.7e-27 125.2 62 95.2
BraSC140t45579Z Brassica rapa HOM05D000388 ORTHO05D004227 2.7e-27 125.2 62 95.2
CAN.G1693.3 Capsicum annuum HOM05D000388 ORTHO05D004227 2.7e-27 125.2 63 93.7
BolSC47t61105H Brassica oleracea HOM05D000388 ORTHO05D004227 3.5e-27 124.8 64 92.2
HanXRQChr11g0332831 Helianthus annuus HOM05D000388 ORTHO05D004227 3.5e-27 124.8 91 70.3
Peaxi162Scf00395g00715 Petunia axillaris HOM05D000388 ORTHO05D004227 7.8e-27 123.6 59 96.6
Sed0002396 Sechium edule HOM05D000388 ORTHO05D004227 1.0e-26 123.2 64 90.6
Gohir.A07G163609 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.3e-26 122.9 64 92.2
Glyma.09G178600 Glycine max HOM05D000388 ORTHO05D004227 1.7e-26 122.5 64 89.1
LjContig00489g0010648 Lotus japonicus HOM05D000388 ORTHO05D004227 1.7e-26 122.5 64 92.2
BolSC49t61190H Brassica oleracea HOM05D000388 ORTHO05D004227 1.9e-25 119.0 62 91.9
Solyc05g016130.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 5.6e-25 117.5 63 85.7
Glyma.01G201600 Glycine max HOM05D000388 ORTHO05D004227 4.7e-24 114.4 64 85.9
Sed0015902 Sechium edule HOM05D000388 ORTHO05D004227 1.4e-23 112.8 61 86.9
Gorai.011G148900 Gossypium raimondii HOM05D000388 ORTHO05D004227 2.3e-23 112.1 59 89.8
Gorai.010G171400 Gossypium raimondii HOM05D000388 ORTHO05D004227 8.9e-23 110.2 58 89.7
Gohir.D06G147066 Gossypium hirsutum HOM05D000388 ORTHO05D004227 2.6e-22 108.6 58 87.9
arahy.Tifrunner.gnm1.ann1.9ACV62 Arachis hypogaea HOM05D000388 ORTHO05D004227 3.4e-22 108.2 64 84.4
arahy.Tifrunner.gnm1.ann1.HC26ZW Arachis hypogaea HOM05D000388 ORTHO05D004227 3.4e-22 108.2 64 84.4
Nitab4.5_0010321g0020 Nicotiana tabacum HOM05D000388 ORTHO05D004227 7.6e-22 107.1 55 90.9
Oeu062832.1 Olea europaea HOM05D000388 ORTHO05D004227 1.7e-21 105.9 75 72.0
HanXRQChr04g0099361 Helianthus annuus HOM05D000388 ORTHO05D004227 2.9e-21 105.1 51 96.1
EL10Ac1g01463 Beta vulgaris HOM05D000388 ORTHO05D004227 1.4e-20 102.8 50 96.0
AL2G20760 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 1.6e-19 99.4 64 76.6
BolC9t56935H Brassica oleracea HOM05D000388 ORTHO05D004227 1.6e-19 99.4 50 94.0
DCAR_032485 Daucus carota HOM05D000388 ORTHO05D004227 1.6e-19 99.4 64 76.6
PSO548G0079 Papaver somniferum HOM05D000388 ORTHO05D004227 1.6e-19 99.4 64 76.6
Potri.013G141700 Populus trichocarpa HOM05D000388 ORTHO05D004227 1.6e-19 99.4 64 76.6
PGR111G0128 Punica granatum HOM05D000388 ORTHO05D004227 1.6e-19 99.4 64 76.6
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 3.5e-19 98.2 45 100.0
Potri.003G065133 Populus trichocarpa HOM05D000388 ORTHO05D004227 3.5e-19 98.2 45 100.0
CAN.G678.5 Capsicum annuum HOM05D000388 ORTHO05D004227 6.0e-19 97.4 54 88.9
Gohir.A08G157400 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.3e-18 96.3 64 73.4
BraSC25t45839Z Brassica rapa HOM05D000388 ORTHO05D004227 1.7e-18 95.9 66 72.7
Migut.D01351 Erythranthe guttata HOM05D000388 ORTHO05D004227 3.9e-18 94.7 55 85.5
BraSC25t45876Z Brassica rapa HOM05D000388 ORTHO05D004227 5.1e-18 94.4 46 95.7
RcHm_v2.0_Chr5g0077071 Rosa chinensis HOM05D000388 ORTHO05D004227 1.5e-17 92.8 64 73.4
Lsat_1_v5_gn_8_5941 Lactuca sativa HOM05D000388 ORTHO05D004227 3.3e-17 91.7 45 93.3
HanXRQChr11g0333581 Helianthus annuus HOM05D000388 ORTHO05D004227 9.6e-17 90.1 44 95.5
Solyc09g015320.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.6e-16 89.4 62 72.6
RcHm_v2.0_Chr5g0077061 Rosa chinensis HOM05D000388 ORTHO05D004227 2.1e-16 89.0 54 79.6
Lalb_Chr15g0080681 Lupinus albus HOM05D000388 ORTHO05D004227 1.1e-15 86.7 40 100.0
SMO086G0046 Selaginella moellendorffii HOM05D000388 ORTHO05D004227 6.8e-15 84.0 78 51.3
Phvul.001G146500 Phaseolus vulgaris HOM05D000388 ORTHO05D004227 4.4e-14 81.3 63 68.3
Gohir.A03G019600 Gossypium hirsutum HOM05D000388 ORTHO05D004227 5.8e-14 80.9 41 92.7
Lalb_Chr20g0115471 Lupinus albus HOM05D000388 ORTHO05D004227 5.8e-14 80.9 50 78.0
GSVIVG01008500001 Vitis vinifera HOM05D000388 ORTHO05D004227 9.9e-14 80.1 53 71.7
Peaxi162Scf00284g01052 Petunia axillaris HOM05D000388 ORTHO05D004227 1.4e-12 76.3 50 74.0
MBI14_g12605_MAGBIO Magnolia biondii HOM05D000388 ORTHO05D004227 1.6e-11 72.8 45 73.3
Gohir.A06G120306 Gossypium hirsutum HOM05D000388 ORTHO05D004227 6.0e-11 70.9 33 97.0
Lsat_1_v5_gn_8_77200 Lactuca sativa HOM05D000388 ORTHO05D004227 6.6e-10 67.4 89 46.1
SGA_v2.0_scaffold781G53593 Striga asiatica HOM05D000388 ORTHO05D009867 8.7e-10 67.0 36 86.1
SEGI_24497 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 5.6e-09 64.3 64 54.7
Lsat_1_v5_gn_8_105481 Lactuca sativa HOM05D000388 ORTHO05D004227 1.6e-08 62.8 36 80.6
Lsat_1_v5_gn_2_5581 Lactuca sativa HOM05D000388 ORTHO05D004227 8.1e-08 60.5 91 42.9
Solyc09g015280.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.8e-07 59.3 40 70.0
Eucgr.J00123 Eucalyptus grandis HOM05D000388 ORTHO05D004227 2.6e-06 55.5 27 92.6


User provided reference genes

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