Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 5.8e-272 940.3 467 100.0
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 2.2e-215 752.3 467 79.2
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 4.2e-214 748.0 467 78.4
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 4.4e-211 738.0 468 79.1
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 3.7e-210 734.9 467 78.8
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 1.2e-208 729.9 449 80.6
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 4.5e-208 728.0 467 77.3
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 7.7e-208 727.2 469 78.5
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 2.3e-207 725.7 468 76.7
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 2.9e-207 725.3 471 76.9
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 1.1e-206 723.4 481 75.3
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 9.5e-206 720.3 468 76.5
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 1.2e-205 719.9 472 75.8
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 2.1e-205 719.2 470 76.0
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 2.8e-205 718.8 466 75.8
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 3.0e-204 715.3 462 77.5
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 4.0e-204 714.9 476 75.4
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 5.2e-204 714.5 465 76.6
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.2e-203 713.4 462 77.3
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 5.7e-203 711.1 467 77.1
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.3e-202 709.9 467 77.9
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 1.7e-202 709.5 469 75.3
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 1.7e-202 709.5 470 74.9
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 4.9e-202 708.0 466 76.0
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 4.9e-202 708.0 468 74.6
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 4.9e-202 708.0 466 77.0
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 1.4e-201 706.4 469 74.0
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 1.8e-201 706.1 468 75.4
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 2.4e-201 705.7 468 74.4
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 5.9e-200 701.0 468 74.1
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 7.8e-200 700.7 468 73.9
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 3.9e-199 698.4 471 74.1
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 3.9e-199 698.4 465 74.2
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 5.0e-199 698.0 467 74.7
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 2.5e-198 695.7 464 74.8
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 1.2e-197 693.3 469 74.4
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 1.2e-197 693.3 464 74.1
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 2.1e-197 692.6 466 74.0
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 2.8e-197 692.2 464 74.4
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 4.7e-197 691.4 464 74.1
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 1.8e-196 689.5 469 73.3
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 2.3e-196 689.1 469 72.9
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 3.1e-196 688.7 413 78.0
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 4.4e-195 684.9 468 73.1
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 5.8e-195 684.5 470 72.6
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 5.8e-195 684.5 471 72.8
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 9.8e-195 683.7 469 73.1
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 2.2e-194 682.6 473 72.7
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 4.9e-194 681.4 467 71.5
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 4.9e-194 681.4 467 71.3
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 8.3e-194 680.6 463 73.2
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 9.2e-193 677.2 468 72.4
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 1.2e-192 676.8 473 70.2
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 1.6e-192 676.4 461 72.7
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 3.5e-192 675.2 465 72.9
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 3.5e-192 675.2 484 71.5
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 6.0e-192 674.5 466 71.0
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 2.3e-191 672.5 468 69.2
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 3.9e-191 671.8 462 72.9
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 6.6e-191 671.0 467 69.2
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 1.9e-190 669.5 460 72.2
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 7.3e-190 667.5 460 72.4
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 2.8e-189 665.6 469 72.3
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 3.6e-189 665.2 464 72.2
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 8.0e-189 664.1 471 68.8
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 1.1e-188 663.7 467 68.1
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 3.1e-188 662.1 465 71.4
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 4.0e-188 661.8 461 71.6
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 5.2e-188 661.4 465 71.6
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 1.2e-187 660.2 462 71.2
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 1.2e-187 660.2 461 71.8
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 1.2e-187 660.2 461 71.8
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 3.4e-187 658.7 462 71.6
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 4.4e-187 658.3 468 71.4
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 9.8e-187 657.1 468 71.6
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 1.3e-186 656.8 513 65.9
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 4.9e-186 654.8 461 70.9
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 4.1e-185 651.7 461 70.7
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 2.7e-184 649.0 488 66.6
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 6.0e-184 647.9 396 79.8
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 7.8e-184 647.5 462 69.3
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 9.5e-182 640.6 384 81.0
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 2.8e-181 639.0 422 72.7
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 1.5e-179 633.3 478 68.0
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.2e-178 629.4 407 74.9
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 1.1e-172 610.5 380 77.4
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 3.9e-167 592.0 383 76.8
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 2.4e-164 582.8 420 65.2
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 3.2e-161 572.4 408 65.2
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 1.8e-156 556.6 408 64.2
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 1.7e-146 523.5 478 60.0
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 9.3e-145 517.7 324 79.6
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 3.1e-140 502.7 344 72.1
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 1.6e-136 490.3 460 58.7
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 1.4e-119 434.1 399 53.6
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.5e-118 430.6 406 52.5
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 3.7e-117 426.0 402 52.7
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 3.5e-115 419.5 420 52.1
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 3.8e-106 389.4 396 50.0
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 1.1e-97 361.3 411 45.0
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 5.2e-79 299.3 200 72.5
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 5.2e-71 272.7 187 72.7
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 2.1e-67 260.8 208 62.5
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 2.1e-67 260.8 208 62.5
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 8.1e-56 222.2 200 56.0
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.8e-26 124.8 99 65.7
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 1.1e-20 105.5 70 71.4


User provided reference genes

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