Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015945001 Vitis vinifera HOM05D003206 ORTHO05D014283 3.5e-29 131.0 67 100.0
SalBow6G0819 Salvia bowleyana HOM05D003206 ORTHO05D005207 5.8e-24 113.6 67 86.6
GSVIVG01017394001 Vitis vinifera HOM05D003206 ORTHO05D014283 1.3e-23 112.5 67 89.6
GSVIVG01017422001 Vitis vinifera HOM05D003206 ORTHO05D005207 1.3e-23 112.5 67 89.6
Eucgr.J03080 Eucalyptus grandis HOM05D003206 ORTHO05D005207 2.2e-23 111.7 67 86.6
Eucgr.F03908 Eucalyptus grandis HOM05D003206 ORTHO05D005207 4.9e-23 110.5 67 86.6
Hma1.2p1_0461F.1_g157780 Hydrangea macrophylla HOM05D003206 ORTHO05D005207 4.9e-23 110.5 67 86.6
MELO3C023442.2 Cucumis melo HOM05D003206 ORTHO05D005207 6.4e-23 110.2 67 86.6
ClCG09G003080 Citrullus lanatus HOM05D003206 ORTHO05D005207 8.4e-23 109.8 67 85.1
Duzib160G0518 Durio zibethinus HOM05D003206 ORTHO05D005207 8.4e-23 109.8 67 85.1
Rhsim08G0211000 Rhododendron simsii HOM05D003206 ORTHO05D005207 8.4e-23 109.8 67 85.1
Thecc.06G031800 Theobroma cacao HOM05D003206 ORTHO05D005207 8.4e-23 109.8 67 85.1
CSS0015374 Camellia sinensis var. sinensis HOM05D003206 ORTHO05D005207 1.4e-22 109.0 67 82.1
Aqoxy7G02449 Aquilegia oxysepala HOM05D003206 ORTHO05D005207 1.9e-22 108.6 67 83.6
Dinv30630 Davidia involucrata HOM05D003206 ORTHO05D005207 1.9e-22 108.6 67 83.6
Actinidia18218 Actinidia chinensis HOM05D003206 ORTHO05D005207 2.4e-22 108.2 67 83.6
CiPaw.01G250100 Carya illinoinensis HOM05D003206 ORTHO05D005207 4.2e-22 107.5 67 83.6
MD17G1215600 Malus domestica HOM05D003206 ORTHO05D005207 4.2e-22 107.5 67 83.6
QL05p032185 Quercus lobata HOM05D003206 ORTHO05D005207 4.2e-22 107.5 67 82.1
vmacro19016 Vaccinium macrocarpon HOM05D003206 ORTHO05D005207 4.2e-22 107.5 67 82.1
Cc04_g04590 Coffea canephora HOM05D003206 ORTHO05D005207 5.4e-22 107.1 67 83.6
CsaV3_7G032210 Cucumis sativus L. HOM05D003206 ORTHO05D005207 7.1e-22 106.7 67 85.1
Lj5A75T45 Lonicera japonica HOM05D003206 ORTHO05D005207 7.1e-22 106.7 67 82.1
Prupe.3G091800 Prunus persica HOM05D003206 ORTHO05D005207 7.1e-22 106.7 67 83.6
Ah.01g020430 Amaranthus hybridus HOM05D003206 ORTHO05D005207 9.3e-22 106.3 67 80.6
RcHm_v2.0_Chr2g0134571 Rosa chinensis HOM05D003206 ORTHO05D005207 9.3e-22 106.3 67 80.6
unitig_27.g24952 Utricularia gibba HOM05D003206 ORTHO05D002964 9.3e-22 106.3 67 82.1
EL10Ac9g21895 Beta vulgaris HOM05D003206 ORTHO05D005207 1.2e-21 105.9 67 82.1
Gohir.A06G115200 Gossypium hirsutum HOM05D003206 ORTHO05D005207 1.2e-21 105.9 67 82.1
Gorai.010G138000 Gossypium raimondii HOM05D003206 ORTHO05D005207 1.2e-21 105.9 67 82.1
MD09G1222300 Malus domestica HOM05D003206 ORTHO05D005207 1.6e-21 105.5 67 80.6
QL05p032218 Quercus lobata HOM05D003206 ORTHO05D005207 1.6e-21 105.5 67 80.6
AUR62011496 Chenopodium quinoa HOM05D003206 ORTHO05D005207 2.1e-21 105.1 67 80.6
AUR62016312 Chenopodium quinoa HOM05D003206 ORTHO05D005207 2.1e-21 105.1 67 80.6
Lsat_1_v5_gn_1_31380 Lactuca sativa HOM05D003206 ORTHO05D005207 2.1e-21 105.1 67 80.6
Sed0019835 Sechium edule HOM05D003206 ORTHO05D005207 2.1e-21 105.1 67 82.1
TAR626G1759 Trochodendron aralioides HOM05D003206 ORTHO05D005207 2.1e-21 105.1 67 83.6
CAN.G407.13 Capsicum annuum HOM05D003206 ORTHO05D005207 2.7e-21 104.8 67 80.6
ECA247G4132 Erigeron canadensis HOM05D003206 ORTHO05D005207 2.7e-21 104.8 67 80.6
PGR102G2366 Punica granatum HOM05D003206 ORTHO05D005207 2.7e-21 104.8 67 80.6
CANSAT56G2846 Cannabis sativa HOM05D003206 ORTHO05D005207 3.5e-21 104.4 67 80.6
FvH4_6g29330 Fragaria vesca HOM05D003206 ORTHO05D005207 3.5e-21 104.4 67 79.1
FAN02G2065 Fragaria x ananassa HOM05D003206 ORTHO05D005207 3.5e-21 104.4 67 79.1
FAN02G2439 Fragaria x ananassa HOM05D003206 ORTHO05D005207 3.5e-21 104.4 67 79.1
FAN05G2875 Fragaria x ananassa HOM05D003206 ORTHO05D005207 3.5e-21 104.4 67 79.1
FAN09G0310 Fragaria x ananassa HOM05D003206 ORTHO05D005207 3.5e-21 104.4 67 79.1
FAN14G4723 Fragaria x ananassa HOM05D003206 ORTHO05D005207 3.5e-21 104.4 67 79.1
Cfa001939 Carpinus fangiana HOM05D003206 ORTHO05D005207 4.6e-21 104.0 66 83.3
Duzib192G0877 Durio zibethinus HOM05D003206 ORTHO05D005207 6.0e-21 103.6 67 79.1
HanXRQChr02g0034821 Helianthus annuus HOM05D003206 ORTHO05D005207 6.0e-21 103.6 67 80.6
Nn8g39607 Nelumbo nucifera HOM05D003206 ORTHO05D005207 6.0e-21 103.6 67 79.1
Migut.I00744 Erythranthe guttata HOM05D003206 ORTHO05D005207 7.9e-21 103.2 67 79.1
Manes.11G060045 Manihot esculenta HOM05D003206 ORTHO05D005207 7.9e-21 103.2 67 80.6
Manes.11G060600 Manihot esculenta HOM05D003206 ORTHO05D005207 7.9e-21 103.2 67 80.6
Os04g0647800 Oryza sativa ssp. japonica HOM05D003206 ORTHO05D005207 1.0e-20 102.8 67 80.6
Peaxi162Scf00553g00628 Petunia axillaris HOM05D003206 ORTHO05D005207 1.0e-20 102.8 67 79.1
Sc10g0006040 Simmondsia chinensis HOM05D003206 ORTHO05D005207 1.0e-20 102.8 67 80.6
PSO017G7051 Papaver somniferum HOM05D003206 ORTHO05D005207 1.3e-20 102.4 67 80.6
PSO170G1430 Papaver somniferum HOM05D003206 ORTHO05D005207 1.3e-20 102.4 67 80.6
COL.COLO4_11866 Corchorus olitorius HOM05D003206 ORTHO05D005207 1.8e-20 102.1 67 77.6
Manes.11G080700 Manihot esculenta HOM05D003206 ORTHO05D014283 1.8e-20 102.1 68 79.4
Cpa.g.sc10.151 Carica papaya HOM05D003206 ORTHO05D005207 2.3e-20 101.7 67 79.1
Zm00001eb068580 Zea mays HOM05D003206 ORTHO05D005207 3.0e-20 101.3 67 79.1
Nn2g12167 Nelumbo nucifera HOM05D003206 ORTHO05D005207 3.9e-20 100.9 67 74.6
MSTRG.4700 Avicennia marina HOM05D003206 ORTHO05D005207 5.1e-20 100.5 67 80.6
Duzib235G0619 Durio zibethinus HOM05D003206 ORTHO05D005207 5.1e-20 100.5 67 79.1
Oeu004210.1 Olea europaea HOM05D003206 ORTHO05D005207 5.1e-20 100.5 67 77.6
TAR383G0666 Trochodendron aralioides HOM05D003206 ORTHO05D005207 5.1e-20 100.5 67 79.1
Haze_20327 Corylus avellana HOM05D003206 ORTHO05D005207 6.7e-20 100.1 66 81.8
THA.LOC104812468 Tarenaya hassleriana HOM05D003206 ORTHO05D005207 6.7e-20 100.1 65 80.0
unitig_699.g19091 Utricularia gibba HOM05D003206 ORTHO05D005207 6.7e-20 100.1 67 74.6
TAR626G0098 Trochodendron aralioides HOM05D003206 ORTHO05D005207 8.7e-20 99.8 77 71.4
Sopen03g036390 Solanum pennellii HOM05D003206 ORTHO05D005207 2.5e-19 98.2 67 77.6
SGA_v2.0_scaffold5G02725 Striga asiatica HOM05D003206 ORTHO05D005207 2.5e-19 98.2 67 77.6
Hund06548 Selenicereus undatus HOM05D003206 ORTHO05D005207 3.3e-19 97.8 67 76.1
BcaB02g08684 Brassica carinata HOM05D003206 ORTHO05D005207 4.3e-19 97.4 66 78.8
Solyc03g117490.4 Solanum lycopersicum HOM05D003206 ORTHO05D005207 4.3e-19 97.4 67 77.6
AL2G41040 Arabidopsis lyrata HOM05D003206 ORTHO05D005207 5.6e-19 97.1 66 78.8
MSTRG.11155 Avicennia marina HOM05D003206 ORTHO05D005207 5.6e-19 97.1 67 71.6
BcaC08g47591 Brassica carinata HOM05D003206 ORTHO05D014283 5.6e-19 97.1 66 78.8
A07p45230 Brassica napus HOM05D003206 ORTHO05D005207 5.6e-19 97.1 66 78.8
C06p54070 Brassica napus HOM05D003206 ORTHO05D005207 5.6e-19 97.1 66 78.8
BolC6t40420H Brassica oleracea HOM05D003206 ORTHO05D005207 5.6e-19 97.1 66 78.8
BraA07t32026Z Brassica rapa HOM05D003206 ORTHO05D005207 5.6e-19 97.1 66 78.8
Carub.0002s2712 Capsella rubella HOM05D003206 ORTHO05D005207 5.6e-19 97.1 66 78.8
A02p23540 Brassica napus HOM05D003206 ORTHO05D005207 7.4e-19 96.7 66 78.8
C02p37310 Brassica napus HOM05D003206 ORTHO05D005207 7.4e-19 96.7 66 78.8
BolC2t09741H Brassica oleracea HOM05D003206 ORTHO05D005207 7.4e-19 96.7 66 78.8
BraA02t07347Z Brassica rapa HOM05D003206 ORTHO05D005207 7.4e-19 96.7 66 78.8
PSO063G0253 Papaver somniferum HOM05D003206 ORTHO05D016781 7.4e-19 96.7 67 77.6
CSS0035908 Camellia sinensis var. sinensis HOM05D003206 ORTHO05D014283 9.6e-19 96.3 67 74.6
Nitab4.5_0003072g0120 Nicotiana tabacum HOM05D003206 ORTHO05D005207 1.6e-18 95.5 67 74.6
Nitab4.5_0004013g0050 Nicotiana tabacum HOM05D003206 ORTHO05D005207 1.6e-18 95.5 67 74.6
CARHR074790 Cardamine hirsuta HOM05D003206 ORTHO05D005207 2.1e-18 95.1 66 77.3
Aqoxy133s001 Aquilegia oxysepala HOM05D003206 ORTHO05D005207 2.8e-18 94.7 67 74.6
Aqoxy7G03604 Aquilegia oxysepala HOM05D003206 ORTHO05D005207 2.8e-18 94.7 67 74.6
AT1G80460 Arabidopsis thaliana HOM05D003206 ORTHO05D005207 2.8e-18 94.7 66 77.3
BcaC03g15965 Brassica carinata HOM05D003206 ORTHO05D005207 2.8e-18 94.7 65 78.5
BcaC03g15966 Brassica carinata HOM05D003206 ORTHO05D005207 2.8e-18 94.7 65 78.5
FAN02G3805 Fragaria x ananassa HOM05D003206 ORTHO05D005207 3.6e-18 94.4 67 74.6
BcaB02g07269 Brassica carinata HOM05D003206 ORTHO05D005207 4.8e-18 94.0 66 77.3
BcaB05g25268 Brassica carinata HOM05D003206 ORTHO05D005207 4.8e-18 94.0 66 77.3
A07p26680 Brassica napus HOM05D003206 ORTHO05D005207 4.8e-18 94.0 66 77.3
DCAR_025524 Daucus carota HOM05D003206 ORTHO05D005207 4.8e-18 94.0 66 72.7
Sp5g35360 Schrenkiella parvula HOM05D003206 ORTHO05D005207 4.8e-18 94.0 66 75.8
Ciclev10025360m.g Citrus clementina HOM05D003206 ORTHO05D005207 6.2e-18 93.6 67 71.6
TWI12G0864 Tripterygium wilfordii HOM05D003206 ORTHO05D005207 8.1e-18 93.2 67 74.6
BcaC08g45315 Brassica carinata HOM05D003206 ORTHO05D005207 1.1e-17 92.8 66 75.8
C06p29160 Brassica napus HOM05D003206 ORTHO05D005207 1.1e-17 92.8 66 75.8
BolC6t38080H Brassica oleracea HOM05D003206 ORTHO05D005207 1.1e-17 92.8 66 75.8
BraA07t30311Z Brassica rapa HOM05D003206 ORTHO05D005207 1.1e-17 92.8 66 75.8
HPP92_026428 Vanilla planifolia HOM05D003206 ORTHO05D005207 1.4e-17 92.4 66 69.7
CDE02G1563 Ceratophyllum demersum HOM05D003206 ORTHO05D005207 2.4e-17 91.7 66 74.2
Ciclev10020202m.g Citrus clementina HOM05D003206 ORTHO05D005207 5.3e-17 90.5 66 69.7
Ciclev10025756m.g Citrus clementina HOM05D003206 ORTHO05D005207 5.3e-17 90.5 67 70.1
Dinv38137 Davidia involucrata HOM05D003206 ORTHO05D005207 5.3e-17 90.5 66 72.7
TPR.G12167 Trifolium pratense HOM05D003206 ORTHO05D005207 5.3e-17 90.5 66 69.7
Potri.003G030900 Populus trichocarpa HOM05D003206 ORTHO05D005207 6.9e-17 90.1 66 72.7
CDE04G3165 Ceratophyllum demersum HOM05D003206 ORTHO05D005207 9.0e-17 89.7 66 72.7
Ciclev10024258m.g Citrus clementina HOM05D003206 ORTHO05D005207 9.0e-17 89.7 67 68.7
Sabra03G0017400 Salix brachista HOM05D003206 ORTHO05D005207 9.0e-17 89.7 66 75.8
FvH4_6g29340 Fragaria vesca HOM05D003206 ORTHO05D005207 1.2e-16 89.4 64 75.0
Aa31LG4G720 Aethionema arabicum HOM05D003206 ORTHO05D005207 1.5e-16 89.0 66 75.8
Glyma.07G028600 Glycine max HOM05D003206 ORTHO05D005207 2.0e-16 88.6 66 71.2
TPR.G38649 Trifolium pratense HOM05D003206 ORTHO05D005207 2.0e-16 88.6 66 68.2
PGSC0003DMG400014144 Solanum tuberosum HOM05D003206 ORTHO05D005207 2.6e-16 88.2 67 73.1
Ca_12518_v3 Cicer arietinum L. HOM05D003206 ORTHO05D005207 7.6e-16 86.7 66 68.2
Glyma.08G214200 Glycine max HOM05D003206 ORTHO05D014283 7.6e-16 86.7 66 65.2
Lalb_Chr01g0012271 Lupinus albus HOM05D003206 ORTHO05D005207 9.9e-16 86.3 66 66.7
Medtr4g009920 Medicago truncatula HOM05D003206 ORTHO05D005207 1.3e-15 85.9 66 68.2
Oeu018801.1 Olea europaea HOM05D003206 ORTHO05D005207 1.7e-15 85.5 90 57.8
MBI14_g04912_MAGBIO Magnolia biondii HOM05D003206 ORTHO05D005207 2.9e-15 84.7 66 68.2
SEGI_06294 Sequoiadendron giganteum HOM05D003206 ORTHO05D005207 3.8e-15 84.3 66 65.2
Phvul.010G157400 Phaseolus vulgaris HOM05D003206 ORTHO05D005207 6.4e-15 83.6 67 68.7
TPR.G38684 Trifolium pratense HOM05D003206 ORTHO05D005207 6.4e-15 83.6 66 68.2
Oeu004214.1 Olea europaea HOM05D003206 ORTHO05D005207 8.4e-15 83.2 105 50.5
Lalb_Chr25g0279091 Lupinus albus HOM05D003206 ORTHO05D005207 1.1e-14 82.8 66 66.7
PSO478G0299 Papaver somniferum HOM05D003206 ORTHO05D005207 1.1e-14 82.8 67 62.7
Lsat_1_v5_gn_5_8920 Lactuca sativa HOM05D003206 ORTHO05D005207 1.4e-14 82.4 67 65.7
Pp3c5_10000 Physcomitrium patens HOM05D003206 ORTHO05D005207 1.4e-14 82.4 66 69.7
Psat7g257640 Pisum sativum HOM05D003206 ORTHO05D005207 2.4e-14 81.6 66 63.6
AagrBONN_evm.TU.Sc2ySwM_228.3101 Anthoceros agrestis HOM05D003206 ORTHO05D005207 3.2e-14 81.3 53 75.5
SMO271G0060 Selaginella moellendorffii HOM05D003206 ORTHO05D005207 4.2e-14 80.9 66 66.7
DCAR_016275 Daucus carota HOM05D003206 ORTHO05D005207 5.5e-14 80.5 66 65.2
ATR0767G098 Amborella trichopoda HOM05D003206 ORTHO05D005207 9.3e-14 79.7 66 66.7
Lalb_Chr04g0262301 Lupinus albus HOM05D003206 ORTHO05D005207 9.3e-14 79.7 66 62.1
ECA246G2681 Erigeron canadensis HOM05D003206 ORTHO05D005207 1.2e-13 79.3 60 70.0
Lj3g0014011 Lotus japonicus HOM05D003206 ORTHO05D005207 2.1e-13 78.6 66 63.6
Cfa021276 Carpinus fangiana HOM05D003206 ORTHO05D014283 3.5e-13 77.8 66 69.7
VMungo0331G1864 Vigna mungo HOM05D003206 ORTHO05D005207 3.5e-13 77.8 66 63.6
Gohir.D06G120000 Gossypium hirsutum HOM05D003206 ORTHO05D005207 4.6e-13 77.4 67 67.2
Mapoly0004s0005 Marchantia polymorpha HOM05D003206 ORTHO05D005207 2.3e-12 75.1 53 69.8
arahy.Tifrunner.gnm1.ann1.TT8CUF Arachis hypogaea HOM05D003206 ORTHO05D005207 1.5e-11 72.4 63 60.3
arahy.Tifrunner.gnm1.ann1.ZMG720 Arachis hypogaea HOM05D003206 ORTHO05D005207 1.5e-11 72.4 63 60.3
Actinidia03225 Actinidia chinensis HOM05D003206 ORTHO05D005207 2.5e-11 71.6 69 60.9
arahy.Tifrunner.gnm1.ann1.GS37TA Arachis hypogaea HOM05D003206 ORTHO05D005207 5.6e-11 70.5 63 58.7
BcaC06g35262 Brassica carinata HOM05D003206 ORTHO05D016781 7.4e-11 70.1 50 76.0
C07p18050 Brassica napus HOM05D003206 ORTHO05D016781 7.4e-11 70.1 50 76.0
BolC3t19546H Brassica oleracea HOM05D003206 ORTHO05D016781 7.4e-11 70.1 50 76.0
A03p18490 Brassica napus HOM05D003206 ORTHO05D016781 2.1e-10 68.6 50 76.0
BcaC07g39914 Brassica carinata HOM05D003206 ORTHO05D005207 8.2e-10 66.6 50 74.0
C02p54480 Brassica napus HOM05D003206 ORTHO05D016781 3.1e-09 64.7 50 70.0
Cfa012491 Carpinus fangiana HOM05D003206 ORTHO05D014283 6.9e-09 63.5 63 60.3
BcaC03g17488 Brassica carinata HOM05D003206 ORTHO05D016781 9.0e-09 63.2 49 69.4
BolC2t11510H Brassica oleracea HOM05D003206 ORTHO05D016781 9.0e-09 63.2 49 69.4
PRCOL_00002221 Prasinoderma coloniale HOM05D003206 ORTHO05D005207 5.8e-08 60.5 66 53.0
Atru.chr1.2869 Acer truncatum HOM05D003206 ORTHO05D014283 7.6e-08 60.1 35 82.9
CBR_g30419 Chara braunii HOM05D003206 ORTHO05D005207 1.7e-07 58.9 50 62.0
CBR_g36912 Chara braunii HOM05D003206 ORTHO05D005207 1.7e-07 58.9 50 62.0
RcHm_v2.0_Chr2g0134741 Rosa chinensis HOM05D003206 ORTHO05D034830 3.8e-07 57.8 36 83.3
Cre04.g224150 Chlamydomonas reinhardtii HOM05D003206 ORTHO05D005207 8.4e-07 56.6 47 61.7
Haze_12952 Corylus avellana HOM05D003206 ORTHO05D005207 1.9e-06 55.5 36 80.6
Manes.02G220810 Manihot esculenta HOM05D003206 ORTHO05D014283 3.2e-06 54.7 38 71.1
MCO09G056 Micromonas commoda HOM05D003206 ORTHO05D005207 7.1e-06 53.5 48 56.2


User provided reference genes

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