Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 2.5e-69 265.4 138 100.0
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 2.0e-23 112.8 149 50.3
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 2.7e-23 112.5 141 48.2
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 1.0e-22 110.5 150 54.0
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 1.3e-22 110.2 159 50.9
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 3.9e-22 108.6 158 52.5
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 5.0e-22 108.2 152 46.7
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 6.6e-22 107.8 157 49.0
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 8.6e-22 107.5 158 44.3
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 1.2e-20 103.6 156 47.4
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 1.2e-20 103.6 158 44.3
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 2.1e-20 102.8 145 46.2
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.1e-20 102.8 158 43.0
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 2.8e-20 102.4 149 47.0
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 2.8e-20 102.4 157 45.9
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 3.6e-20 102.1 155 43.2
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 3.6e-20 102.1 162 44.4
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 4.7e-20 101.7 139 49.6
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 4.7e-20 101.7 138 49.3
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 8.0e-20 100.9 154 48.1
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 8.0e-20 100.9 147 47.6
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 8.0e-20 100.9 144 52.8
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 8.0e-20 100.9 158 50.6
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 8.0e-20 100.9 135 49.6
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 1.0e-19 100.5 147 49.0
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 1.0e-19 100.5 150 45.3
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 2.3e-19 99.4 144 47.9
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 4.0e-19 98.6 158 50.6
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 5.2e-19 98.2 161 42.9
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 8.9e-19 97.4 135 45.9
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 8.9e-19 97.4 146 45.2
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 1.5e-18 96.7 156 41.7
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 1.5e-18 96.7 139 44.6
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 2.0e-18 96.3 149 45.6
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 2.6e-18 95.9 156 44.2
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 7.5e-18 94.4 165 40.0
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 7.5e-18 94.4 165 40.0
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 7.5e-18 94.4 157 40.1
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 9.8e-18 94.0 156 42.9
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 9.8e-18 94.0 157 40.1
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 1.3e-17 93.6 141 44.0
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.7e-17 93.2 151 45.7
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 1.7e-17 93.2 149 44.3
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 1.7e-17 93.2 141 46.8
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 2.2e-17 92.8 140 47.9
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 2.9e-17 92.4 138 45.7
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 3.7e-17 92.0 155 41.9
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 3.7e-17 92.0 157 38.9
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 4.9e-17 91.7 156 46.2
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 4.9e-17 91.7 155 43.2
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 6.4e-17 91.3 137 45.3
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 6.4e-17 91.3 160 41.9
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 1.1e-16 90.5 143 43.4
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 1.1e-16 90.5 139 46.0
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 1.4e-16 90.1 129 45.0
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 1.9e-16 89.7 151 43.0
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 2.4e-16 89.4 136 45.6
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 2.4e-16 89.4 145 44.1
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 3.2e-16 89.0 138 44.2
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 4.1e-16 88.6 145 44.1
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 5.4e-16 88.2 137 43.8
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.7e-15 85.9 141 46.8
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 6.0e-15 84.7 150 42.0
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 2.3e-14 82.8 176 36.9
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 2.3e-14 82.8 146 45.2
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 3.0e-14 82.4 126 44.4
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 3.0e-14 82.4 137 45.3
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 3.9e-14 82.0 133 40.6
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 5.0e-14 81.6 137 44.5
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 8.6e-14 80.9 123 43.9
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 8.6e-14 80.9 136 43.4
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 1.1e-13 80.5 137 40.1
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 1.5e-13 80.1 124 46.0
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 2.5e-13 79.3 138 45.7
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 3.3e-13 79.0 142 45.8
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 7.3e-13 77.8 143 40.6
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.2e-12 77.0 145 40.0
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 1.6e-12 76.6 168 38.7
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 2.8e-12 75.9 124 45.2
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 2.8e-12 75.9 144 38.2
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 3.6e-12 75.5 139 43.2
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 3.6e-12 75.5 139 43.2
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 3.6e-12 75.5 139 43.2
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 3.6e-12 75.5 139 43.2
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 3.6e-12 75.5 139 43.2
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 3.6e-12 75.5 150 38.7
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 4.7e-12 75.1 140 43.6
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 4.7e-12 75.1 140 43.6
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 6.2e-12 74.7 166 41.6
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 6.2e-12 74.7 166 41.6
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 8.1e-12 74.3 146 40.4
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 1.1e-11 73.9 137 38.7
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 1.4e-11 73.6 123 45.5
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 1.4e-11 73.6 144 41.7
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 1.8e-11 73.2 134 42.5
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 3.1e-11 72.4 159 36.5
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 4.0e-11 72.0 169 35.5
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 4.0e-11 72.0 134 43.3
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 4.0e-11 72.0 138 42.0
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 1.2e-10 70.5 128 39.1
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 1.2e-10 70.5 146 40.4
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 4.4e-10 68.6 124 42.7
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 7.5e-10 67.8 174 32.8
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 9.8e-10 67.4 160 36.2
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 9.8e-10 67.4 120 39.2
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 1.3e-09 67.0 80 52.5
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 1.7e-09 66.6 83 51.8
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 2.2e-09 66.2 152 39.5
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 6.4e-09 64.7 139 41.7
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 8.3e-09 64.3 135 31.9
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 4.1e-08 62.0 134 37.3
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 7.1e-08 61.2 107 43.0
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 3.5e-07 58.9 69 55.1
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 7.8e-07 57.8 120 35.8
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 3.0e-06 55.8 36 69.4
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 3.9e-06 55.5 137 38.0
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 5.1e-06 55.1 37 67.6
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 6.6e-06 54.7 119 36.1


User provided reference genes

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