Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 1.9e-212 742.3 387 100.0
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 4.4e-132 475.3 342 71.9
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 9.8e-132 474.2 342 72.2
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 1.4e-130 470.3 353 71.7
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 1.8e-130 469.9 355 72.4
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 3.1e-130 469.2 306 78.8
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 9.2e-130 467.6 307 77.2
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 1.2e-129 467.2 323 75.2
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 3.5e-129 465.7 380 65.8
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 7.8e-129 464.5 314 74.8
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 2.3e-128 463.0 321 74.5
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 2.9e-128 462.6 306 75.5
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 5.0e-128 461.8 323 74.6
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 6.6e-128 461.5 348 70.7
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 1.1e-127 460.7 397 64.2
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 1.5e-127 460.3 323 75.5
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 4.3e-127 458.8 323 74.9
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 7.3e-127 458.0 373 65.4
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 7.3e-127 458.0 306 76.1
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 2.1e-126 456.4 305 75.1
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 2.8e-126 456.1 295 78.3
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 8.0e-126 454.5 321 74.1
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 8.0e-126 454.5 308 73.4
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 1.4e-125 453.8 397 63.2
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 4.0e-125 452.2 317 75.7
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 6.8e-125 451.4 305 73.8
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 2.0e-124 449.9 309 72.8
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 3.4e-124 449.1 397 63.0
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 4.4e-124 448.7 397 62.7
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 4.4e-124 448.7 307 74.3
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 1.7e-123 446.8 334 70.7
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 1.7e-123 446.8 378 62.4
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 4.9e-123 445.3 305 73.4
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 8.3e-123 444.5 399 62.4
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 8.3e-123 444.5 381 63.8
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 1.4e-122 443.7 327 69.1
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 3.2e-122 442.6 310 72.6
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 5.4e-122 441.8 303 74.3
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 5.4e-122 441.8 299 73.6
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 1.6e-121 440.3 307 73.6
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 2.7e-121 439.5 309 72.5
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 4.6e-121 438.7 306 72.5
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 6.0e-121 438.3 305 73.1
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 6.0e-121 438.3 396 62.1
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 7.8e-121 438.0 387 62.0
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 7.8e-121 438.0 311 71.7
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 1.0e-120 437.6 341 67.2
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 5.0e-120 435.3 303 73.3
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 6.6e-120 434.9 307 72.6
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 8.6e-120 434.5 340 67.4
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 2.5e-119 433.0 377 61.0
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 4.3e-119 432.2 332 67.8
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 1.2e-118 430.6 308 71.8
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 2.3e-117 426.4 306 72.9
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 2.3e-117 426.4 327 68.2
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 4.0e-117 425.6 302 73.2
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 4.0e-117 425.6 322 69.3
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 4.0e-117 425.6 334 68.6
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 1.2e-116 424.1 315 69.5
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 1.5e-116 423.7 303 71.6
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 2.0e-116 423.3 355 64.5
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 2.0e-116 423.3 316 69.0
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 2.6e-116 422.9 303 71.9
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 3.4e-116 422.5 319 69.3
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 4.4e-116 422.2 306 71.9
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 1.3e-115 420.6 355 63.9
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 8.3e-115 417.9 326 64.7
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 1.9e-114 416.8 304 72.4
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 3.2e-114 416.0 318 70.1
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 3.2e-114 416.0 281 75.8
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 4.1e-114 415.6 391 57.5
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 2.7e-113 412.9 304 71.4
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 4.6e-113 412.1 318 69.8
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 1.0e-112 411.0 304 71.7
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 6.6e-112 408.3 303 70.3
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 6.6e-112 408.3 286 73.4
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 8.6e-112 407.9 305 70.2
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 8.6e-112 407.9 358 63.1
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 8.6e-112 407.9 288 75.0
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 1.1e-111 407.5 322 64.0
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 2.5e-111 406.4 362 61.6
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 8.1e-110 401.4 305 68.9
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 2.0e-108 396.7 306 67.0
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 1.1e-106 391.0 291 70.8
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 1.9e-106 390.2 347 58.8
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 6.0e-105 385.2 310 61.3
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 1.7e-104 383.6 413 55.0
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 1.4e-101 374.0 272 70.6
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 2.4e-101 373.2 308 61.0
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 3.2e-98 362.8 295 65.1
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 2.1e-94 350.1 307 61.6
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 6.2e-94 348.6 256 71.9
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 6.2e-94 348.6 361 55.4
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 3.1e-93 346.3 322 58.7
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 4.0e-93 345.9 325 57.8
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 4.0e-93 345.9 302 57.9
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 1.7e-91 340.5 305 57.0
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 2.2e-91 340.1 299 56.9
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 5.1e-88 328.9 284 60.9
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 4.0e-85 319.3 213 75.1
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 1.2e-84 317.8 209 76.6
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 3.0e-80 303.1 198 76.8
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 8.7e-80 301.6 228 69.7
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 4.8e-78 295.8 231 68.0
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 3.5e-73 279.6 212 66.5
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 4.3e-71 272.7 334 47.6
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 7.4e-71 271.9 282 56.0
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 3.7e-70 269.6 381 47.8
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.3e-64 251.1 310 46.8
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 2.3e-64 250.4 301 48.2
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 9.7e-63 245.0 284 48.6
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 3.7e-54 216.5 175 61.1
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 1.6e-49 201.1 316 41.8
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 3.0e-48 196.8 351 37.9
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 1.9e-42 177.6 130 68.5
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 8.0e-33 145.6 99 73.7
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 8.0e-33 145.6 99 73.7
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 2.5e-26 124.0 94 62.8
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 5.5e-26 122.9 107 61.7
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 2.0e-23 114.4 98 60.2
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 2.0e-23 114.4 98 60.2
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 1.7e-22 111.3 98 58.2
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 1.7e-22 111.3 90 60.0
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 3.3e-18 97.1 96 59.4
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 1.3e-11 75.1 66 57.6
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 2.5e-10 70.9 79 48.1


User provided reference genes

Program Settings