Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015646001 Vitis vinifera HOM05D003826 ORTHO05D004479 1.9e-62 242.3 117 100.0
GSVIVG01015647001 Vitis vinifera HOM05D003826 ORTHO05D004479 6.1e-53 210.7 108 93.5
GSVIVG01015652001 Vitis vinifera HOM05D003826 ORTHO05D004479 1.6e-45 186.0 116 82.8
Manes.07G038200 Manihot esculenta HOM05D003826 ORTHO05D004479 4.8e-42 174.5 116 75.9
TAR628G1674 Trochodendron aralioides HOM05D003826 ORTHO05D004479 1.4e-41 172.9 116 75.9
Nn1g05569 Nelumbo nucifera HOM05D003826 ORTHO05D004479 1.8e-41 172.6 116 74.1
FvH4_2g11710 Fragaria vesca HOM05D003826 ORTHO05D004479 4.1e-41 171.4 116 75.9
FAN24G2578 Fragaria x ananassa HOM05D003826 ORTHO05D004479 4.1e-41 171.4 116 75.9
PGR042G0672 Punica granatum HOM05D003826 ORTHO05D004479 4.1e-41 171.4 116 75.0
Cfa005734 Carpinus fangiana HOM05D003826 ORTHO05D004479 9.1e-41 170.2 116 74.1
Eucgr.G00988 Eucalyptus grandis HOM05D003826 ORTHO05D004479 1.2e-40 169.9 116 75.0
TAR376G0575 Trochodendron aralioides HOM05D003826 ORTHO05D004479 1.6e-40 169.5 116 75.0
Manes.10G098600 Manihot esculenta HOM05D003826 ORTHO05D004479 2.0e-40 169.1 116 74.1
Prupe.8G069800 Prunus persica HOM05D003826 ORTHO05D004479 2.0e-40 169.1 113 76.1
vmacro19957 Vaccinium macrocarpon HOM05D003826 ORTHO05D004479 2.7e-40 168.7 116 75.0
MELO3C018606.2 Cucumis melo HOM05D003826 ORTHO05D004479 3.5e-40 168.3 116 72.4
ClCG09G016080 Citrullus lanatus HOM05D003826 ORTHO05D004479 5.9e-40 167.5 116 74.1
Ciclev10029337m.g Citrus clementina HOM05D003826 ORTHO05D004479 5.9e-40 167.5 116 72.4
Rhsim05G0101900 Rhododendron simsii HOM05D003826 ORTHO05D004479 1.3e-39 166.4 116 73.3
COL.COLO4_32389 Corchorus olitorius HOM05D003826 ORTHO05D004479 1.7e-39 166.0 117 70.1
EL10Ac9g22073 Beta vulgaris HOM05D003826 ORTHO05D004479 2.3e-39 165.6 113 72.6
Dinv24149 Davidia involucrata HOM05D003826 ORTHO05D004479 2.3e-39 165.6 116 73.3
Sc18g0007060 Simmondsia chinensis HOM05D003826 ORTHO05D004479 2.3e-39 165.6 116 71.6
CsaV3_7G006880 Cucumis sativus L. HOM05D003826 ORTHO05D004479 2.9e-39 165.2 116 72.4
CiPaw.05G029600 Carya illinoinensis HOM05D003826 ORTHO05D004479 3.8e-39 164.9 116 72.4
Potri.017G043700 Populus trichocarpa HOM05D003826 ORTHO05D004479 3.8e-39 164.9 116 71.6
Actinidia28031 Actinidia chinensis HOM05D003826 ORTHO05D004479 5.0e-39 164.5 116 72.4
Haze_10523 Corylus avellana HOM05D003826 ORTHO05D004479 5.0e-39 164.5 116 72.4
Hma1.2p1_0908F.1_g235485 Hydrangea macrophylla HOM05D003826 ORTHO05D004479 5.0e-39 164.5 116 72.4
Aqoxy6G00874 Aquilegia oxysepala HOM05D003826 ORTHO05D004479 6.6e-39 164.1 113 76.1
MBI16_g12461_MAGBIO Magnolia biondii HOM05D003826 ORTHO05D004479 6.6e-39 164.1 113 74.3
MD05G1047400 Malus domestica HOM05D003826 ORTHO05D004479 8.6e-39 163.7 116 70.7
CSS0016886 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 1.1e-38 163.3 116 71.6
CSS0036052 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 1.1e-38 163.3 116 71.6
Duzib147G0892 Durio zibethinus HOM05D003826 ORTHO05D004479 1.5e-38 162.9 116 72.4
Sed0006788 Sechium edule HOM05D003826 ORTHO05D004479 1.5e-38 162.9 116 71.6
Atru.chr6.1261 Acer truncatum HOM05D003826 ORTHO05D004479 1.9e-38 162.5 116 70.7
Oeu042406.1 Olea europaea HOM05D003826 ORTHO05D004479 1.9e-38 162.5 116 69.8
Gohir.A13G050900 Gossypium hirsutum HOM05D003826 ORTHO05D004479 2.5e-38 162.2 116 69.8
Potri.017G043900 Populus trichocarpa HOM05D003826 ORTHO05D004479 2.5e-38 162.2 116 70.7
Os03g0737400 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 3.3e-38 161.8 116 70.7
Atru.chr6.1269 Acer truncatum HOM05D003826 ORTHO05D004479 4.2e-38 161.4 116 69.8
Lj5A230G39 Lonicera japonica HOM05D003826 ORTHO05D004479 4.2e-38 161.4 116 70.7
Thecc.02G129300 Theobroma cacao HOM05D003826 ORTHO05D004479 5.5e-38 161.0 116 70.7
SGA_v2.0_scaffold83G26375 Striga asiatica HOM05D003826 ORTHO05D004479 9.5e-38 160.2 113 70.8
CARHR104200 Cardamine hirsuta HOM05D003826 ORTHO05D004479 1.6e-37 159.5 116 70.7
Cc02_g20920 Coffea canephora HOM05D003826 ORTHO05D004479 1.6e-37 159.5 116 68.1
Duzib052G0856 Durio zibethinus HOM05D003826 ORTHO05D004479 1.6e-37 159.5 116 69.0
TWI14G0912 Tripterygium wilfordii HOM05D003826 ORTHO05D004479 1.6e-37 159.5 116 69.0
PSO541G0595 Papaver somniferum HOM05D003826 ORTHO05D004479 2.1e-37 159.1 116 69.8
AL3G45800 Arabidopsis lyrata HOM05D003826 ORTHO05D004479 2.8e-37 158.7 116 70.7
Gorai.013G055500 Gossypium raimondii HOM05D003826 ORTHO05D004479 2.8e-37 158.7 116 68.1
TWI59G0852 Tripterygium wilfordii HOM05D003826 ORTHO05D004479 2.8e-37 158.7 116 69.0
Migut.B00552 Erythranthe guttata HOM05D003826 ORTHO05D004479 3.6e-37 158.3 116 66.4
Nitab4.5_0002017g0010 Nicotiana tabacum HOM05D003826 ORTHO05D004479 3.6e-37 158.3 116 67.2
QL11p025207 Quercus lobata HOM05D003826 ORTHO05D004479 4.7e-37 157.9 116 69.8
Sabra17G0029800 Salix brachista HOM05D003826 ORTHO05D004479 4.7e-37 157.9 116 69.8
THA.LOC104807183 Tarenaya hassleriana HOM05D003826 ORTHO05D004479 4.7e-37 157.9 116 70.7
Cpa.g.sc20.1 Carica papaya HOM05D003826 ORTHO05D004479 6.1e-37 157.5 116 69.0
DCAR_003601 Daucus carota HOM05D003826 ORTHO05D004479 6.1e-37 157.5 116 70.7
Thhalv10022868m.g Eutrema salsugineum HOM05D003826 ORTHO05D004479 6.1e-37 157.5 116 70.7
AT2G14110 Arabidopsis thaliana HOM05D003826 ORTHO05D004479 8.0e-37 157.1 113 71.7
BcaB02g11486 Brassica carinata HOM05D003826 ORTHO05D004479 8.0e-37 157.1 116 69.8
A09p13020 Brassica napus HOM05D003826 ORTHO05D004479 8.0e-37 157.1 116 69.8
BraA09t36947Z Brassica rapa HOM05D003826 ORTHO05D004479 8.0e-37 157.1 116 69.8
Aa31LG8G12520 Aethionema arabicum HOM05D003826 ORTHO05D004479 1.0e-36 156.8 116 69.0
BolC9t54449H Brassica oleracea HOM05D003826 ORTHO05D004479 1.0e-36 156.8 116 69.8
Sp3g27460 Schrenkiella parvula HOM05D003826 ORTHO05D004479 1.0e-36 156.8 116 69.8
PGR102G1409 Punica granatum HOM05D003826 ORTHO05D004479 1.4e-36 156.4 102 75.5
MSTRG.27816 Avicennia marina HOM05D003826 ORTHO05D004479 1.8e-36 156.0 116 68.1
VMungo0540G1729 Vigna mungo HOM05D003826 ORTHO05D004479 2.3e-36 155.6 116 69.0
Zm00001eb215290 Zea mays HOM05D003826 ORTHO05D004479 2.3e-36 155.6 116 68.1
CSS0050337 Camellia sinensis var. sinensis HOM05D003826 ORTHO05D004479 3.0e-36 155.2 116 68.1
CDE04G3107 Ceratophyllum demersum HOM05D003826 ORTHO05D004479 3.0e-36 155.2 116 69.8
MSTRG.20281 Avicennia marina HOM05D003826 ORTHO05D004479 4.0e-36 154.8 116 66.4
TPR.G9500 Trifolium pratense HOM05D003826 ORTHO05D004479 5.2e-36 154.5 116 69.0
BcaC04g22775 Brassica carinata HOM05D003826 ORTHO05D004479 6.8e-36 154.1 116 68.1
C09p15420 Brassica napus HOM05D003826 ORTHO05D004479 6.8e-36 154.1 116 68.1
HanXRQChr08g0227191 Helianthus annuus HOM05D003826 ORTHO05D004479 6.8e-36 154.1 116 67.2
RcHm_v2.0_Chr6g0271011 Rosa chinensis HOM05D003826 ORTHO05D004479 6.8e-36 154.1 116 69.0
Carub.0003s2836 Capsella rubella HOM05D003826 ORTHO05D004479 8.9e-36 153.7 116 67.2
Nitab4.5_0008998g0010 Nicotiana tabacum HOM05D003826 ORTHO05D004479 1.2e-35 153.3 116 65.5
ECA236G1467 Erigeron canadensis HOM05D003826 ORTHO05D000778 1.5e-35 152.9 111 69.4
Lalb_Chr05g0216361 Lupinus albus HOM05D003826 ORTHO05D004479 1.5e-35 152.9 116 69.0
arahy.Tifrunner.gnm1.ann1.8F9AHD Arachis hypogaea HOM05D003826 ORTHO05D004479 2.0e-35 152.5 116 67.2
arahy.Tifrunner.gnm1.ann1.AL483W Arachis hypogaea HOM05D003826 ORTHO05D004479 2.0e-35 152.5 116 67.2
PGSC0003DMG400031403 Solanum tuberosum HOM05D003826 ORTHO05D004479 2.0e-35 152.5 116 64.7
Thecc.01G090400 Theobroma cacao HOM05D003826 ORTHO05D004479 2.6e-35 152.1 116 68.1
Nitab4.5_0002095g0060 Nicotiana tabacum HOM05D003826 ORTHO05D004479 4.4e-35 151.4 103 68.9
Glyma.13G256700 Glycine max HOM05D003826 ORTHO05D004479 5.7e-35 151.0 116 66.4
Medtr2g009600 Medicago truncatula HOM05D003826 ORTHO05D004479 5.7e-35 151.0 116 67.2
unitig_37.g12793 Utricularia gibba HOM05D003826 ORTHO05D004479 5.7e-35 151.0 102 67.6
Lalb_Chr16g0382941 Lupinus albus HOM05D003826 ORTHO05D004479 1.3e-34 149.8 112 67.0
Psat1g214120 Pisum sativum HOM05D003826 ORTHO05D004479 1.3e-34 149.8 116 66.4
Dinv13602 Davidia involucrata HOM05D003826 ORTHO05D004479 2.2e-34 149.1 116 65.5
Lj6g0003535 Lotus japonicus HOM05D003826 ORTHO05D004479 2.8e-34 148.7 116 65.5
Phvul.006G202000 Phaseolus vulgaris HOM05D003826 ORTHO05D004479 3.7e-34 148.3 116 66.4
Sed0018824 Sechium edule HOM05D003826 ORTHO05D004479 4.9e-34 147.9 116 65.5
CANSAT54G1150 Cannabis sativa HOM05D003826 ORTHO05D004479 6.3e-34 147.5 116 65.5
Nn5g29884 Nelumbo nucifera HOM05D003826 ORTHO05D004479 8.3e-34 147.1 89 79.8
Haze_03870 Corylus avellana HOM05D003826 ORTHO05D004479 1.1e-33 146.7 113 65.5
Hund00378 Selenicereus undatus HOM05D003826 ORTHO05D004479 1.1e-33 146.7 89 78.7
Atru.chr3.1247 Acer truncatum HOM05D003826 ORTHO05D004479 1.4e-33 146.4 116 62.9
Peaxi162Scf00003g03230 Petunia axillaris HOM05D003826 ORTHO05D004479 1.4e-33 146.4 116 62.9
arahy.Tifrunner.gnm1.ann1.JLXM4S Arachis hypogaea HOM05D003826 ORTHO05D004479 1.8e-33 146.0 116 65.5
arahy.Tifrunner.gnm1.ann1.QQ8XF2 Arachis hypogaea HOM05D003826 ORTHO05D004479 1.8e-33 146.0 116 65.5
Cpa.g.sc55.25 Carica papaya HOM05D003826 ORTHO05D004479 2.4e-33 145.6 116 64.7
PGSC0003DMG400033580 Solanum tuberosum HOM05D003826 ORTHO05D004479 2.4e-33 145.6 116 62.9
CAN.G997.2 Capsicum annuum HOM05D003826 ORTHO05D004479 4.1e-33 144.8 116 61.2
Solyc01g105970.3 Solanum lycopersicum HOM05D003826 ORTHO05D004479 4.1e-33 144.8 116 62.9
Sopen01g048350 Solanum pennellii HOM05D003826 ORTHO05D004479 4.1e-33 144.8 116 62.9
Migut.N01096 Erythranthe guttata HOM05D003826 ORTHO05D004479 5.4e-33 144.4 116 62.1
Lj4g0024713 Lotus japonicus HOM05D003826 ORTHO05D004479 5.4e-33 144.4 116 62.9
Cfa006882 Carpinus fangiana HOM05D003826 ORTHO05D004479 7.0e-33 144.1 116 62.9
Nitab4.5_0011038g0020 Nicotiana tabacum HOM05D003826 ORTHO05D004479 7.0e-33 144.1 116 62.9
unitig_46.g18833 Utricularia gibba HOM05D003826 ORTHO05D004479 7.0e-33 144.1 116 61.2
Ah.03g139970 Amaranthus hybridus HOM05D003826 ORTHO05D004479 9.2e-33 143.7 116 62.9
Ca_00163_v3 Cicer arietinum L. HOM05D003826 ORTHO05D004479 5.9e-32 141.0 116 65.5
Medtr4g093560 Medicago truncatula HOM05D003826 ORTHO05D004479 5.9e-32 141.0 112 62.5
ATR0767G074 Amborella trichopoda HOM05D003826 ORTHO05D004479 7.8e-32 140.6 89 77.5
Phvul.002G212900 Phaseolus vulgaris HOM05D003826 ORTHO05D004479 7.8e-32 140.6 116 59.5
SalBow6G1284 Salvia bowleyana HOM05D003826 ORTHO05D004479 7.8e-32 140.6 89 73.0
Gorai.008G017400 Gossypium raimondii HOM05D003826 ORTHO05D004479 1.0e-31 140.2 116 64.7
Prupe.6G201600 Prunus persica HOM05D003826 ORTHO05D004479 1.0e-31 140.2 116 62.1
CiPaw.07G047500 Carya illinoinensis HOM05D003826 ORTHO05D004479 2.3e-31 139.0 102 66.7
Hma1.2p1_1058F.1_g252870 Hydrangea macrophylla HOM05D003826 ORTHO05D004479 3.8e-31 138.3 116 60.3
SEGI_37389 Sequoiadendron giganteum HOM05D003826 ORTHO05D004479 3.8e-31 138.3 113 61.9
HPP92_016899 Vanilla planifolia HOM05D003826 ORTHO05D004479 5.0e-31 137.9 116 62.1
Cc07_g14100 Coffea canephora HOM05D003826 ORTHO05D004479 1.5e-30 136.3 113 61.1
MD01G1039300 Malus domestica HOM05D003826 ORTHO05D004479 1.5e-30 136.3 116 60.3
Gohir.D12G017100 Gossypium hirsutum HOM05D003826 ORTHO05D004479 2.5e-30 135.6 113 62.8
Psat7g101120 Pisum sativum HOM05D003826 ORTHO05D004479 3.3e-30 135.2 116 59.5
Glyma.07G181900 Glycine max HOM05D003826 ORTHO05D004479 4.3e-30 134.8 111 59.5
ATR0767G082 Amborella trichopoda HOM05D003826 ORTHO05D004479 5.6e-30 134.4 89 73.0
Manes.12G126200 Manihot esculenta HOM05D003826 ORTHO05D004479 9.5e-30 133.7 116 62.9
Hund16529 Selenicereus undatus HOM05D003826 ORTHO05D004479 9.5e-30 133.7 100 65.0
TPR.G2887 Trifolium pratense HOM05D003826 ORTHO05D004479 3.6e-29 131.7 116 56.9
arahy.Tifrunner.gnm1.ann1.8NDV1J Arachis hypogaea HOM05D003826 ORTHO05D004479 8.0e-29 130.6 112 57.1
FAN23G0964 Fragaria x ananassa HOM05D003826 ORTHO05D004479 8.0e-29 130.6 116 58.6
FvH4_1g19640 Fragaria vesca HOM05D003826 ORTHO05D004479 6.8e-28 127.5 116 57.8
FAN19G1458 Fragaria x ananassa HOM05D003826 ORTHO05D004479 6.8e-28 127.5 116 57.8
FAN26G3235 Fragaria x ananassa HOM05D003826 ORTHO05D004479 6.8e-28 127.5 116 57.8
Mapoly0042s0019 Marchantia polymorpha HOM05D003826 ORTHO05D004479 6.8e-28 127.5 113 59.3
RcHm_v2.0_Chr2g0111211 Rosa chinensis HOM05D003826 ORTHO05D004479 8.9e-28 127.1 109 60.6
FAN28G0881 Fragaria x ananassa HOM05D003826 ORTHO05D004479 1.2e-27 126.7 113 58.4
arahy.Tifrunner.gnm1.ann1.MWC9N2 Arachis hypogaea HOM05D001561 ORTHO05D001715 2.0e-27 125.9 112 57.1
AagrBONN_evm.TU.Sc2ySwM_362.1195 Anthoceros agrestis HOM05D003826 ORTHO05D004479 2.6e-27 125.6 113 55.8
AUR62003663 Chenopodium quinoa HOM05D003826 ORTHO05D004479 9.8e-27 123.6 116 57.8
Lsat_1_v5_gn_7_82781 Lactuca sativa HOM05D003826 ORTHO05D004479 2.2e-26 122.5 116 59.5
Pp3c1_28610 Physcomitrium patens HOM05D003826 ORTHO05D004479 2.2e-26 122.5 113 54.9
SMO271G0099 Selaginella moellendorffii HOM05D003826 ORTHO05D004479 8.3e-26 120.6 113 53.1
Mapoly0032s0046 Marchantia polymorpha HOM05D003826 ORTHO05D004479 2.4e-25 119.0 113 53.1
Os03g0737300 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 2.4e-25 119.0 116 52.6
CANSAT01G0714 Cannabis sativa HOM05D003826 ORTHO05D004479 1.6e-24 116.3 116 50.9
AUR62012887 Chenopodium quinoa HOM05D003826 ORTHO05D004479 2.3e-23 112.5 74 75.7
AUR62027111 Chenopodium quinoa HOM05D003826 ORTHO05D004479 8.6e-23 110.5 74 74.3
Lj5A230G40 Lonicera japonica HOM05D003826 ORTHO05D004479 1.1e-22 110.2 92 58.7
Os11g0434000 Oryza sativa ssp. japonica HOM05D003826 ORTHO05D004479 2.5e-22 109.0 98 61.2
Ah.01g023970 Amaranthus hybridus HOM05D003826 ORTHO05D004479 2.1e-21 105.9 74 68.9
CBR_g26273 Chara braunii HOM05D003826 ORTHO05D004479 2.1e-21 105.9 99 49.5
SalBow8G4107 Salvia bowleyana HOM05D003826 ORTHO05D004479 2.1e-21 105.9 74 70.3
AUR62017972 Chenopodium quinoa HOM05D003826 ORTHO05D004479 1.8e-20 102.8 71 70.4
RhsimUnG0154900 Rhododendron simsii HOM05D003826 ORTHO05D004479 1.7e-18 96.3 75 68.0
Glyma.15G058200 Glycine max HOM05D003826 ORTHO05D004479 2.9e-18 95.5 113 49.6
Solyc10g047310.1 Solanum lycopersicum HOM05D003826 ORTHO05D004479 4.6e-16 88.2 74 56.8
VMungo0251G2759 Vigna mungo HOM05D003826 ORTHO05D004479 4.6e-16 88.2 80 56.2
Ciclev10026755m.g Citrus clementina HOM05D003826 ORTHO05D004479 2.3e-15 85.9 72 63.9
Mapoly0042s0017 Marchantia polymorpha HOM05D003826 ORTHO05D004479 3.9e-15 85.1 79 58.2
Peaxi162Scf00299g00634 Petunia axillaris HOM05D003826 ORTHO05D004479 3.9e-15 85.1 116 43.1
Sopen10g017590 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-14 83.2 69 59.4
Mapoly0010s0051 Marchantia polymorpha HOM05D003826 ORTHO05D004479 1.5e-11 73.2 105 37.1
MD10G1054300 Malus domestica HOM05D003826 ORTHO05D004479 2.9e-10 68.9 47 68.1
THA.LOC104824951 Tarenaya hassleriana HOM05D003826 ORTHO05D004479 9.2e-09 63.9 43 69.8


User provided reference genes

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