Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015604001 Vitis vinifera HOM05D005191 ORTHO05D006725 8.8e-276 953.0 474 100.0
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 4.0e-228 794.7 471 81.7
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 1.7e-226 789.3 472 80.9
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 6.6e-223 777.3 479 80.0
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 4.7e-221 771.2 471 79.4
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 6.2e-221 770.8 473 78.6
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 1.4e-220 769.6 472 79.4
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 4.0e-220 768.1 473 79.7
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 2.0e-219 765.8 484 78.1
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 2.9e-218 761.9 473 78.0
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 6.4e-218 760.8 473 78.0
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.1e-217 760.0 473 79.3
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 1.5e-214 749.6 473 77.0
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 7.3e-214 747.3 473 77.4
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 3.6e-213 745.0 509 73.3
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 6.9e-212 740.7 473 77.4
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 2.0e-211 739.2 473 77.4
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 1.7e-210 736.1 472 75.0
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 2.2e-210 735.7 470 77.2
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 1.1e-209 733.4 474 77.8
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 4.2e-209 731.5 472 76.5
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 1.0e-207 726.9 473 74.2
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 2.3e-207 725.7 496 73.0
Oeu052176.1 Olea europaea HOM05D005191 ORTHO05D006725 7.4e-206 720.7 473 72.5
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 1.3e-205 719.9 478 73.6
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 2.8e-205 718.8 473 75.7
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 1.4e-204 716.5 472 74.2
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 5.3e-204 714.5 473 71.0
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 6.9e-204 714.1 473 72.7
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 9.0e-204 713.8 474 74.5
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.5e-203 713.0 473 72.5
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 2.6e-203 712.2 473 70.6
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 9.9e-203 710.3 474 72.8
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 1.3e-202 709.9 475 72.4
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.3e-202 709.9 473 72.3
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 3.8e-202 708.4 473 72.3
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 5.5e-201 704.5 474 70.5
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.2e-200 703.4 470 71.9
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 1.6e-200 703.0 474 70.3
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 3.5e-200 701.8 474 74.3
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 3.5e-200 701.8 473 70.6
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 5.6e-198 694.5 474 72.8
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 5.6e-198 694.5 474 71.3
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 9.6e-198 693.7 474 73.6
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 1.6e-197 693.0 474 70.0
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 1.6e-197 693.0 474 70.0
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 2.1e-197 692.6 474 71.1
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 1.1e-196 690.3 475 69.7
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 1.5e-195 686.4 474 68.8
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 5.8e-195 684.5 430 77.7
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 7.6e-195 684.1 473 69.6
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 3.8e-194 681.8 473 71.2
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 1.2e-192 676.8 485 69.7
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 2.1e-192 676.0 474 70.0
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 4.6e-192 674.9 475 69.9
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 7.9e-192 674.1 474 71.5
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 1.0e-191 673.7 475 70.7
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 1.3e-191 673.3 473 69.8
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 1.3e-189 666.8 473 68.3
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 3.7e-189 665.2 475 68.4
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 1.1e-188 663.7 473 68.1
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 5.3e-188 661.4 457 70.7
SalBow1G1849 Salvia bowleyana HOM05D005191 ORTHO05D006725 1.2e-187 660.2 537 60.3
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 1.5e-187 659.8 474 69.8
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 2.2e-186 656.0 473 68.3
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 2.9e-186 655.6 473 67.2
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 2.5e-185 652.5 472 68.2
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 1.6e-184 649.8 474 69.2
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 7.9e-184 647.5 472 67.8
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 3.3e-182 642.1 542 61.4
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 7.4e-182 641.0 479 67.2
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 2.6e-179 632.5 474 67.5
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 1.4e-177 626.7 472 69.5
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 3.6e-176 622.1 474 66.0
Hund26401 Selenicereus undatus HOM05D005191 ORTHO05D006725 4.5e-171 605.1 474 63.5
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 2.9e-170 602.4 474 63.3
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 6.1e-168 594.7 486 63.0
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 8.8e-167 590.9 352 83.0
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 5.0e-162 575.1 478 62.6
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 3.2e-161 572.4 483 61.1
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 2.0e-155 553.1 474 58.2
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 5.0e-154 548.5 474 57.0
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 6.5e-154 548.1 476 58.6
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 2.5e-153 546.2 474 57.0
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 5.5e-153 545.0 475 57.1
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 5.5e-153 545.0 475 57.1
Haze_25491 Corylus avellana HOM05D005191 ORTHO05D006725 2.7e-152 542.7 381 70.9
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 3.6e-152 542.3 474 57.2
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 8.0e-152 541.2 474 56.8
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 1.2e-150 537.3 475 57.1
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 3.7e-149 532.3 475 56.2
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 3.7e-149 532.3 475 56.2
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 1.3e-146 523.9 479 54.9
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 6.8e-143 511.5 299 81.9
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 2.0e-139 500.0 382 68.1
Sabra06G0047500 Salix brachista HOM05D005191 ORTHO05D006725 1.8e-127 460.3 308 74.4
Ca_06948_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 4.4e-126 455.7 327 68.8
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 1.1e-113 414.5 483 48.4
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 3.1e-95 353.2 496 41.3
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 9.0e-95 351.7 249 71.1
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 7.1e-92 342.0 496 42.1
vmacro06156 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 5.3e-87 325.9 245 66.9
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 3.4e-86 323.2 229 66.4
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 1.6e-80 304.3 491 37.7
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 4.5e-78 296.2 211 69.2
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 7.9e-75 285.4 214 65.0
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 3.3e-73 280.0 486 35.8
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 5.3e-71 272.7 450 37.6
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 1.9e-65 254.2 519 32.9
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 6.3e-64 249.2 198 64.1
FAN06G0842 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.5e-61 239.2 314 46.2
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 2.6e-57 227.3 135 82.2
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 7.0e-55 219.2 176 59.7
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 1.6e-46 191.4 134 72.4
unitig_0.g2716 Utricularia gibba HOM05D005191 ORTHO05D006725 6.5e-45 186.0 193 50.3
Actinidia38722 Actinidia chinensis HOM05D005191 ORTHO05D006725 1.6e-43 181.4 162 58.6
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 4.7e-43 179.9 135 68.1
CDE05G1976 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 8.0e-43 179.1 159 55.3
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 1.2e-35 155.2 97 76.3
FAN06G5005 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.3e-34 151.0 267 38.6
RcHm_v2.0_Chr5g0051701 Rosa chinensis HOM05D005191 ORTHO05D006725 2.4e-31 141.0 123 58.5
FAN10G4062 Fragaria x ananassa HOM05D005191 ORTHO05D006725 4.5e-30 136.7 136 56.6
FvH4_7g23890 Fragaria vesca HOM05D005191 ORTHO05D006725 3.8e-29 133.7 150 48.7
FAN10G2766 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.2e-25 122.1 83 69.9
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 4.5e-22 110.2 74 70.3
MBI13_g29624_MAGBIO Magnolia biondii HOM05D005191 ORTHO05D006725 3.8e-21 107.1 64 76.6
FAN26G2291 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.6e-14 85.1 58 69.0
FvH4_1g29180 Fragaria vesca HOM05D005191 ORTHO05D025363 3.9e-13 80.5 51 74.5
FAN06G4723 Fragaria x ananassa HOM05D005191 ORTHO05D006725 6.4e-08 63.2 39 74.4
Sp3g26280 Schrenkiella parvula HOM05D005191 ORTHO05D012938 7.8e-06 56.2 60 48.3


User provided reference genes

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