Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 9.7e-92 340.1 170 100.0
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 6.7e-85 317.4 167 92.8
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 7.4e-84 313.9 168 91.7
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 1.7e-83 312.8 168 91.1
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 2.2e-83 312.4 170 90.0
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 2.2e-83 312.4 170 90.0
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 8.2e-83 310.5 167 89.8
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 2.4e-82 308.9 168 89.3
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 9.1e-82 307.0 168 89.3
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 9.1e-82 307.0 167 90.4
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 1.6e-81 306.2 170 89.4
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 2.0e-81 305.8 167 89.8
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 2.6e-81 305.4 167 88.0
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 2.6e-81 305.4 168 89.3
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 5.9e-81 304.3 168 88.7
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 5.9e-81 304.3 167 89.8
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 7.7e-81 303.9 167 89.2
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 1.3e-80 303.1 168 88.1
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.3e-80 303.1 170 87.6
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 2.2e-80 302.4 170 87.1
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 2.2e-80 302.4 167 88.0
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 3.8e-80 301.6 170 87.1
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 5.0e-80 301.2 167 88.0
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 5.0e-80 301.2 168 88.7
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 5.0e-80 301.2 170 86.5
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 6.5e-80 300.8 170 86.5
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 1.5e-79 299.7 168 87.5
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 1.9e-79 299.3 167 88.0
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 1.9e-79 299.3 167 88.0
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 1.9e-79 299.3 170 87.1
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 2.5e-79 298.9 167 86.2
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 3.2e-79 298.5 167 87.4
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 3.2e-79 298.5 167 86.8
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 3.2e-79 298.5 167 87.4
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 4.2e-79 298.1 170 87.1
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 4.2e-79 298.1 167 88.6
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 7.2e-79 297.4 168 87.5
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 9.4e-79 297.0 168 85.7
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 1.2e-78 296.6 167 86.8
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 1.6e-78 296.2 168 86.3
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 2.1e-78 295.8 168 85.7
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 3.6e-78 295.0 170 85.3
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 3.6e-78 295.0 167 86.8
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 4.7e-78 294.7 168 85.1
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 4.7e-78 294.7 167 86.2
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 4.7e-78 294.7 167 86.2
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 6.1e-78 294.3 170 85.3
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 8.0e-78 293.9 170 85.3
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 8.0e-78 293.9 170 85.3
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 8.0e-78 293.9 168 85.1
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 1.4e-77 293.1 167 86.8
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 1.4e-77 293.1 170 85.3
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 1.4e-77 293.1 167 87.4
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 1.8e-77 292.7 168 85.1
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 2.3e-77 292.4 167 85.0
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 3.0e-77 292.0 167 86.8
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 3.0e-77 292.0 170 84.7
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 3.0e-77 292.0 168 84.5
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 4.0e-77 291.6 170 84.7
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 4.0e-77 291.6 167 86.2
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 5.2e-77 291.2 170 82.9
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 6.7e-77 290.8 167 86.8
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 8.8e-77 290.4 168 83.3
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 8.8e-77 290.4 170 84.1
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 1.1e-76 290.0 167 84.4
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 2.0e-76 289.3 167 84.4
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.6e-76 288.9 167 85.0
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 3.3e-76 288.5 167 86.2
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 3.3e-76 288.5 170 82.4
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 3.3e-76 288.5 167 85.0
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 3.3e-76 288.5 167 84.4
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 4.4e-76 288.1 168 83.3
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 4.4e-76 288.1 168 82.7
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 4.4e-76 288.1 194 76.8
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 5.7e-76 287.7 168 82.7
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 5.7e-76 287.7 168 83.9
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 7.5e-76 287.3 205 71.7
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 1.3e-75 286.6 194 76.3
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 2.8e-75 285.4 168 82.1
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 3.7e-75 285.0 168 81.0
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 1.1e-74 283.5 167 83.2
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 1.4e-74 283.1 167 82.6
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.4e-74 283.1 160 86.9
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.8e-74 282.7 164 84.8
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 3.1e-74 282.0 167 83.8
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 3.1e-74 282.0 160 86.9
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 5.3e-74 281.2 167 82.0
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 9.1e-74 280.4 168 81.0
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 1.2e-73 280.0 167 81.4
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 1.2e-73 280.0 168 81.5
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-73 278.9 167 82.0
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 2.7e-73 278.9 167 82.0
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 3.5e-73 278.5 168 80.4
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 4.5e-73 278.1 168 81.0
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 4.5e-73 278.1 167 81.4
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 1.3e-72 276.6 167 78.4
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 2.9e-72 275.4 167 80.8
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 3.8e-72 275.0 168 79.8
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 3.8e-72 275.0 168 79.8
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 3.8e-72 275.0 167 81.4
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 5.0e-72 274.6 168 79.8
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 5.0e-72 274.6 168 79.8
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 6.5e-72 274.2 168 79.8
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.5e-71 273.1 168 79.2
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 2.5e-71 272.3 168 79.2
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 9.4e-71 270.4 167 76.0
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 8.0e-70 267.3 167 80.8
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 2.3e-69 265.8 168 78.6
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 5.2e-69 264.6 168 73.2
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 1.2e-60 236.9 345 43.8
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 9.8e-60 233.8 225 55.1
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 4.9e-59 231.5 169 62.7
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 4.1e-58 228.4 134 83.6
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 7.0e-58 227.6 159 75.5
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 6.6e-56 221.1 123 88.6
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.5e-52 209.9 132 80.3
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 2.6e-52 209.1 167 58.7
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 7.5e-52 207.6 150 72.7
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 9.2e-50 200.7 121 82.6
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 7.3e-47 191.0 115 81.7
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 1.4e-45 186.8 120 74.2
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.7e-41 172.6 121 75.2
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.3e-37 159.5 95 85.3
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 1.1e-21 107.5 73 71.2
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 1.5e-15 87.0 50 80.0
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 7.1e-10 68.2 68 48.5
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 3.0e-08 62.8 47 61.7
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 6.7e-08 61.6 100 42.0
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 2.5e-07 59.7 29 82.8
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 6.2e-06 55.1 127 32.3


User provided reference genes

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