Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015514001 Vitis vinifera HOM05D001327 ORTHO05D005399 1.2e-67 259.6 126 100.0
Dinv36539 Davidia involucrata HOM05D001327 ORTHO05D005399 7.8e-46 187.2 116 80.2
CSS0028454 Camellia sinensis var. sinensis HOM05D001327 ORTHO05D005399 8.6e-45 183.7 116 80.2
CSS0003288 Camellia sinensis var. sinensis HOM05D001327 ORTHO05D005399 7.3e-44 180.6 116 79.3
vmacro06123 Vaccinium macrocarpon HOM05D001327 ORTHO05D005399 8.1e-43 177.2 116 75.9
QL02p087951 Quercus lobata HOM05D001327 ORTHO05D005399 1.4e-42 176.4 118 77.1
CANSAT11G1188 Cannabis sativa HOM05D001327 ORTHO05D005399 3.1e-42 175.3 116 73.3
Dinv41523 Davidia involucrata HOM05D001327 ORTHO05D005399 5.2e-42 174.5 116 76.7
Rhsim03G0247500 Rhododendron simsii HOM05D001327 ORTHO05D005399 5.8e-41 171.0 116 74.1
CSS0001967 Camellia sinensis var. sinensis HOM05D001327 ORTHO05D005399 9.8e-41 170.2 116 74.1
CSS0040252 Camellia sinensis var. sinensis HOM05D001327 ORTHO05D005399 9.8e-41 170.2 116 74.1
Sc08g0006700 Simmondsia chinensis HOM05D001327 ORTHO05D005399 1.7e-40 169.5 114 70.2
TWI34G1767 Tripterygium wilfordii HOM05D001327 ORTHO05D005399 1.7e-40 169.5 117 70.1
TAR626G1113 Trochodendron aralioides HOM05D001327 ORTHO05D005399 1.7e-40 169.5 116 73.3
PSO170G6854 Papaver somniferum HOM05D001327 ORTHO05D005399 2.9e-40 168.7 110 72.7
TWI32G0662 Tripterygium wilfordii HOM05D001327 ORTHO05D005399 2.9e-40 168.7 117 70.9
Manes.06G049400 Manihot esculenta HOM05D001327 ORTHO05D005399 3.7e-40 168.3 114 73.7
Rhsim01G0074600 Rhododendron simsii HOM05D001327 ORTHO05D005399 4.9e-40 167.9 115 73.0
Atru.chr7.1215 Acer truncatum HOM05D001327 ORTHO05D005399 1.1e-39 166.8 117 70.9
CiPaw.03G242900 Carya illinoinensis HOM05D001327 ORTHO05D005399 1.4e-39 166.4 118 71.2
Haze_25606 Corylus avellana HOM05D001327 ORTHO05D005399 1.4e-39 166.4 119 70.6
Cfa003355 Carpinus fangiana HOM05D001327 ORTHO05D005399 1.9e-39 166.0 119 70.6
Nitab4.5_0010615g0020 Nicotiana tabacum HOM05D001327 ORTHO05D005399 3.2e-39 165.2 116 70.7
Actinidia40460 Actinidia chinensis HOM05D001327 ORTHO05D005399 4.1e-39 164.9 116 70.7
MD15G1175300 Malus domestica HOM05D001327 ORTHO05D005399 9.2e-39 163.7 117 70.1
Glyma.06G216800 Glycine max HOM05D001327 ORTHO05D005399 4.6e-38 161.4 127 63.0
Nn2g12004 Nelumbo nucifera HOM05D001327 ORTHO05D005399 4.6e-38 161.4 116 69.0
Ciclev10008632m.g Citrus clementina HOM05D001327 ORTHO05D005399 7.8e-38 160.6 117 69.2
TAR090G0001 Trochodendron aralioides HOM05D001327 ORTHO05D005399 7.8e-38 160.6 116 68.1
DCAR_014874 Daucus carota HOM05D001327 ORTHO05D005399 1.0e-37 160.2 116 69.0
PSO455G0151 Papaver somniferum HOM05D001327 ORTHO05D005399 1.0e-37 160.2 110 70.9
Prupe.7G240800 Prunus persica HOM05D001327 ORTHO05D005399 1.0e-37 160.2 117 69.2
vmacro16513 Vaccinium macrocarpon HOM05D001327 ORTHO05D005399 3.0e-37 158.7 119 70.6
Potri.006G120700 Populus trichocarpa HOM05D001327 ORTHO05D005399 3.9e-37 158.3 114 71.1
Hund09138 Selenicereus undatus HOM05D001327 ORTHO05D005399 1.5e-36 156.4 119 70.6
Lalb_Chr08g0234481 Lupinus albus HOM05D001327 ORTHO05D005399 1.9e-36 156.0 123 63.4
Lj1g0004272 Lotus japonicus HOM05D001327 ORTHO05D005399 2.5e-36 155.6 123 61.0
AUR62011113 Chenopodium quinoa HOM05D001327 ORTHO05D005399 4.3e-36 154.8 116 65.5
Actinidia26397 Actinidia chinensis HOM05D001327 ORTHO05D005399 7.3e-36 154.1 116 69.0
Cc06_g08690 Coffea canephora HOM05D001327 ORTHO05D005399 7.3e-36 154.1 116 69.0
Migut.J01173 Erythranthe guttata HOM05D001327 ORTHO05D005399 7.3e-36 154.1 112 72.3
MD02G1034500 Malus domestica HOM05D001327 ORTHO05D005399 1.2e-35 153.3 117 66.7
Lalb_Chr11g0072051 Lupinus albus HOM05D001327 ORTHO05D005399 1.6e-35 152.9 127 60.6
Cpa.g.sc75.48 Carica papaya HOM05D001327 ORTHO05D005399 2.8e-35 152.1 119 67.2
arahy.Tifrunner.gnm1.ann1.F76PC0 Arachis hypogaea HOM05D001327 ORTHO05D005399 4.7e-35 151.4 127 59.8
FAN28G2560 Fragaria x ananassa HOM05D001327 ORTHO05D005399 6.2e-35 151.0 117 65.8
VMungo1309G1396 Vigna mungo HOM05D001327 ORTHO05D005399 6.2e-35 151.0 127 58.3
arahy.Tifrunner.gnm1.ann1.73D391 Arachis hypogaea HOM05D001327 ORTHO05D005399 1.8e-34 149.4 127 59.1
FvH4_1g03540 Fragaria vesca HOM05D001327 ORTHO05D005399 1.8e-34 149.4 117 65.0
FAN19G1565 Fragaria x ananassa HOM05D001327 ORTHO05D005399 1.8e-34 149.4 117 65.0
Sabra06G0094900 Salix brachista HOM05D001327 ORTHO05D005399 1.8e-34 149.4 109 71.6
RcHm_v2.0_Chr2g0088751 Rosa chinensis HOM05D001327 ORTHO05D005399 3.1e-34 148.7 119 66.4
RcHm_v2.0_Chr2g0088981 Rosa chinensis HOM05D001327 ORTHO05D005399 3.1e-34 148.7 119 66.4
EL10Ac8g18630 Beta vulgaris HOM05D001327 ORTHO05D005399 4.0e-34 148.3 108 69.4
FAN23G0800 Fragaria x ananassa HOM05D001327 ORTHO05D005399 4.0e-34 148.3 117 65.8
RcHm_v2.0_Chr2g0089031 Rosa chinensis HOM05D001327 ORTHO05D005399 6.8e-34 147.5 119 66.4
Phvul.009G197300 Phaseolus vulgaris HOM05D001327 ORTHO05D005399 8.9e-34 147.1 127 57.5
MSTRG.19605 Avicennia marina HOM05D001327 ORTHO05D005399 1.2e-33 146.7 112 65.2
COL.COLO4_05782 Corchorus olitorius HOM05D001327 ORTHO05D005399 1.5e-33 146.4 120 65.0
Lj7A630G51 Lonicera japonica HOM05D001327 ORTHO05D005399 1.5e-33 146.4 131 64.1
Duzib168G1530 Durio zibethinus HOM05D001327 ORTHO05D005399 3.4e-33 145.2 123 63.4
Aqoxy7G03725 Aquilegia oxysepala HOM05D001327 ORTHO05D005399 4.4e-33 144.8 111 63.1
FAN26G1748 Fragaria x ananassa HOM05D001327 ORTHO05D005399 4.4e-33 144.8 117 65.0
Thecc.09G124100 Theobroma cacao HOM05D001327 ORTHO05D005399 4.4e-33 144.8 123 64.2
Psat1g025840 Pisum sativum HOM05D001327 ORTHO05D005399 5.8e-33 144.4 125 54.4
Ca_03162_v3 Cicer arietinum L. HOM05D001327 ORTHO05D005399 7.6e-33 144.1 127 56.7
TPR.G31097 Trifolium pratense HOM05D001327 ORTHO05D005399 7.6e-33 144.1 125 55.2
TPR.G33130 Trifolium pratense HOM05D001327 ORTHO05D005399 7.6e-33 144.1 125 55.2
SGA_v2.0_scaffold229G43327 Striga asiatica HOM05D001327 ORTHO05D005399 9.9e-33 143.7 117 65.0
Gohir.D07G039300 Gossypium hirsutum HOM05D001327 ORTHO05D005399 2.2e-32 142.5 124 62.9
THA.LOC104815261 Tarenaya hassleriana HOM05D001327 ORTHO05D005399 2.9e-32 142.1 117 64.1
ATR1156G060 Amborella trichopoda HOM05D001327 ORTHO05D005399 6.4e-32 141.0 109 62.4
Gorai.001G041400 Gossypium raimondii HOM05D001327 ORTHO05D005399 6.4e-32 141.0 124 62.1
Duzib150G0117 Durio zibethinus HOM05D001327 ORTHO05D005399 8.4e-32 140.6 128 59.4
Gohir.A07G035300 Gossypium hirsutum HOM05D001327 ORTHO05D005399 8.4e-32 140.6 124 62.1
ECA240G0392 Erigeron canadensis HOM05D001327 ORTHO05D005399 1.4e-31 139.8 115 60.9
Gohir.A08G239100 Gossypium hirsutum HOM05D001327 ORTHO05D005399 1.4e-31 139.8 108 63.9
Gorai.004G277600 Gossypium raimondii HOM05D001327 ORTHO05D005399 1.4e-31 139.8 108 63.9
Medtr2g054370 Medicago truncatula HOM05D001327 ORTHO05D005399 1.4e-31 139.8 125 55.2
Solyc08g066820.3 Solanum lycopersicum HOM05D001327 ORTHO05D005399 1.4e-31 139.8 102 68.6
Sopen08g020780 Solanum pennellii HOM05D001327 ORTHO05D005399 1.4e-31 139.8 102 68.6
MELO3C024971.2 Cucumis melo HOM05D001327 ORTHO05D005399 2.4e-31 139.0 120 60.8
MBI04_g07642_MAGBIO Magnolia biondii HOM05D001327 ORTHO05D005399 2.4e-31 139.0 117 60.7
PGR142G2283 Punica granatum HOM05D001327 ORTHO05D005399 2.4e-31 139.0 95 68.4
Sp4g08910 Schrenkiella parvula HOM05D001327 ORTHO05D005399 3.2e-31 138.7 119 61.3
CsaV3_6G002870 Cucumis sativus L. HOM05D001327 ORTHO05D005399 4.1e-31 138.3 120 60.0
Sed0000453 Sechium edule HOM05D001327 ORTHO05D005399 4.1e-31 138.3 121 59.5
THA.LOC104808999 Tarenaya hassleriana HOM05D001327 ORTHO05D005399 7.1e-31 137.5 117 62.4
Peaxi162Scf00641g00009 Petunia axillaris HOM05D001327 ORTHO05D005399 2.7e-30 135.6 111 63.1
AL4G20030 Arabidopsis lyrata HOM05D001327 ORTHO05D005399 6.0e-30 134.4 117 61.5
Thhalv10002015m.g Eutrema salsugineum HOM05D001327 ORTHO05D005399 6.0e-30 134.4 119 59.7
HanXRQChr09g0242321 Helianthus annuus HOM05D001327 ORTHO05D005399 6.0e-30 134.4 116 58.6
Lsat_1_v5_gn_8_59061 Lactuca sativa HOM05D001327 ORTHO05D005399 7.8e-30 134.0 107 60.7
AT2G26830 Arabidopsis thaliana HOM05D001327 ORTHO05D005399 1.0e-29 133.7 117 63.2
Gohir.D06G055300 Gossypium hirsutum HOM05D001327 ORTHO05D005399 2.3e-29 132.5 117 57.3
Carub.0004s0730 Capsella rubella HOM05D001327 ORTHO05D005399 3.0e-29 132.1 125 57.6
ECA236G0859 Erigeron canadensis HOM05D001327 ORTHO05D005399 3.9e-29 131.7 94 68.1
Gorai.010G064600 Gossypium raimondii HOM05D001327 ORTHO05D005399 3.9e-29 131.7 117 57.3
CARHR119010 Cardamine hirsuta HOM05D001327 ORTHO05D005399 8.6e-29 130.6 120 57.5
Aa31LG5G9080 Aethionema arabicum HOM05D001327 ORTHO05D005399 1.1e-28 130.2 117 59.0
CAN.G1757.2 Capsicum annuum HOM05D001327 ORTHO05D005399 1.9e-28 129.4 101 64.4
PGSC0003DMG401009603 Solanum tuberosum HOM05D001327 ORTHO05D005399 1.9e-28 129.4 123 57.7
Lsat_1_v5_gn_7_45660 Lactuca sativa HOM05D001327 ORTHO05D005399 2.5e-28 129.0 111 59.5
CDE07G0693 Ceratophyllum demersum HOM05D001327 ORTHO05D005399 3.3e-28 128.6 116 59.5
HanXRQChr05g0140591 Helianthus annuus HOM05D001327 ORTHO05D005399 3.3e-28 128.6 94 64.9
BcaC02g10832 Brassica carinata HOM05D001327 ORTHO05D005399 7.3e-28 127.5 122 60.7
C04p24660 Brassica napus HOM05D001327 ORTHO05D005399 7.3e-28 127.5 122 60.7
BolC4t23972H Brassica oleracea HOM05D001327 ORTHO05D005399 7.3e-28 127.5 122 60.7
unitig_46.g18722 Utricularia gibba HOM05D001327 ORTHO05D005399 1.6e-27 126.3 112 57.1
BraA07t29498Z Brassica rapa HOM05D001327 ORTHO05D005399 3.6e-27 125.2 95 67.4
A07p17790 Brassica napus HOM05D001327 ORTHO05D005399 6.2e-27 124.4 95 66.3
Zm00001eb313980 Zea mays HOM05D001327 ORTHO05D005399 5.2e-26 121.3 95 60.0
Zm00001eb100060 Zea mays HOM05D001327 ORTHO05D005399 8.9e-26 120.6 95 60.0
Gohir.A06G057000 Gossypium hirsutum HOM05D001327 ORTHO05D005399 2.6e-25 119.0 98 59.2
vmacro20541 Vaccinium macrocarpon HOM05D001327 ORTHO05D005399 1.3e-24 116.7 112 61.6
Nn8g39414 Nelumbo nucifera HOM05D001327 ORTHO05D005399 2.9e-24 115.5 70 75.7
HPP92_016221 Vanilla planifolia HOM05D001327 ORTHO05D005399 6.4e-24 114.4 95 60.0
ClCG08G003060 Citrullus lanatus HOM05D001327 ORTHO05D005399 1.4e-23 113.2 71 74.6
arahy.Tifrunner.gnm1.ann1.4EC4CX Arachis hypogaea HOM05D001327 ORTHO05D005399 5.4e-23 111.3 119 52.9
SHI18655 Sapria himalayana HOM05D001327 ORTHO05D005399 2.1e-22 109.4 102 52.9
unitig_747.g21802 Utricularia gibba HOM05D001327 ORTHO05D005399 2.5e-20 102.4 106 47.2
Nitab4.5_0002551g0010 Nicotiana tabacum HOM05D001327 ORTHO05D005399 3.3e-20 102.1 66 71.2
HPP92_016245 Vanilla planifolia HOM05D001327 ORTHO05D005399 5.6e-20 101.3 77 63.6
Glyma.04G148300 Glycine max HOM05D001327 ORTHO05D005399 7.3e-20 100.9 76 64.5
arahy.Tifrunner.gnm1.ann1.8WED6E Arachis hypogaea HOM05D001327 ORTHO05D005399 2.4e-18 95.9 119 47.1
Os09g0438400 Oryza sativa ssp. japonica HOM05D001327 ORTHO05D005399 5.3e-18 94.7 70 60.0
Actinidia22000 Actinidia chinensis HOM05D001327 ORTHO05D005399 8.4e-16 87.4 62 67.7
Thhalv10019586m.g Eutrema salsugineum HOM05D001327 ORTHO05D005399 1.9e-15 86.3 59 67.8
SMO358G0053 Selaginella moellendorffii HOM05D001327 ORTHO05D005399 9.3e-15 84.0 97 44.3
Eucgr.C01144 Eucalyptus grandis HOM05D001327 ORTHO05D005399 4.6e-14 81.6 52 73.1
Pp3c24_1830 Physcomitrium patens HOM05D001327 ORTHO05D005399 7.9e-14 80.9 90 44.4
SalBow5G4768 Salvia bowleyana HOM05D001327 ORTHO05D005399 3.9e-13 78.6 124 45.2
Mapoly0033s0126 Marchantia polymorpha HOM05D001327 ORTHO05D005399 2.5e-12 75.9 88 42.0
AagrBONN_evm.TU.Sc2ySwM_117.4090 Anthoceros agrestis HOM05D001327 ORTHO05D005399 1.6e-11 73.2 94 40.4
CBR_g19107 Chara braunii HOM05D001327 ORTHO05D005399 4.5e-09 65.1 89 40.4
SMO147G0098 Selaginella moellendorffii HOM05D001327 ORTHO05D005399 4.9e-08 61.6 73 41.1
Ah.09g226330 Amaranthus hybridus HOM05D001327 ORTHO05D005399 6.0e-06 54.7 38 65.8


User provided reference genes

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