Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 9.9e-34 146.0 63 100.0
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 3.7e-28 127.5 64 89.1
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 2.7e-23 111.3 64 71.9
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 3.5e-23 110.9 64 73.4
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 4.6e-23 110.5 61 75.4
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 4.6e-23 110.5 64 70.3
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 7.9e-23 109.8 64 73.4
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 1.3e-22 109.0 52 82.7
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 2.3e-22 108.2 64 71.9
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 2.3e-22 108.2 64 68.8
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 3.0e-22 107.8 64 73.4
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 3.0e-22 107.8 64 71.9
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 3.9e-22 107.5 61 72.1
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 5.1e-22 107.1 52 78.8
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 6.7e-22 106.7 64 68.8
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 6.7e-22 106.7 64 68.8
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.1e-21 105.9 52 78.8
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.1e-21 105.9 52 78.8
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.1e-21 105.9 61 73.8
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.1e-21 105.9 49 81.6
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.5e-21 105.5 52 76.9
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.5e-21 104.8 64 71.9
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 3.3e-21 104.4 52 76.9
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 3.3e-21 104.4 61 70.5
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 4.3e-21 104.0 52 76.9
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 4.3e-21 104.0 50 76.0
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 5.7e-21 103.6 52 76.9
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 5.7e-21 103.6 64 71.9
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 7.4e-21 103.2 58 74.1
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 7.4e-21 103.2 52 75.0
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 9.6e-21 102.8 52 76.9
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 9.6e-21 102.8 64 65.6
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 9.6e-21 102.8 49 77.6
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 9.6e-21 102.8 49 77.6
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 1.3e-20 102.4 57 70.2
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.6e-20 102.1 64 68.8
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 1.6e-20 102.1 55 72.7
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 2.8e-20 101.3 64 62.5
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 2.8e-20 101.3 52 71.2
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 3.7e-20 100.9 52 76.9
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 4.8e-20 100.5 48 79.2
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 4.8e-20 100.5 48 79.2
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 4.8e-20 100.5 48 79.2
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 4.8e-20 100.5 55 72.7
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 4.8e-20 100.5 52 75.0
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 6.3e-20 100.1 52 73.1
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 6.3e-20 100.1 52 73.1
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 6.3e-20 100.1 64 64.1
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 8.2e-20 99.8 48 81.2
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.1e-19 99.4 48 77.1
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 1.1e-19 99.4 52 69.2
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 1.1e-19 99.4 52 71.2
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 1.8e-19 98.6 64 65.6
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 2.4e-19 98.2 50 72.0
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 3.1e-19 97.8 61 63.9
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 5.3e-19 97.1 48 77.1
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 5.3e-19 97.1 64 60.9
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 5.3e-19 97.1 62 64.5
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 5.3e-19 97.1 62 64.5
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 5.3e-19 97.1 64 62.5
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 6.9e-19 96.7 62 66.1
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 9.0e-19 96.3 48 77.1
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 9.0e-19 96.3 64 60.9
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 9.0e-19 96.3 48 77.1
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.2e-18 95.9 55 69.1
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 1.5e-18 95.5 52 73.1
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 2.0e-18 95.1 49 73.5
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 2.6e-18 94.7 46 76.1
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 3.4e-18 94.4 48 72.9
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 4.5e-18 94.0 48 72.9
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 1.0e-17 92.8 48 72.9
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.3e-17 92.4 64 64.1
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 1.3e-17 92.4 46 76.1
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 1.7e-17 92.0 46 76.1
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.9e-17 91.3 64 64.1
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 3.8e-17 90.9 51 68.6
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 3.8e-17 90.9 52 65.4
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 5.0e-17 90.5 46 76.1
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 6.5e-17 90.1 44 75.0
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 1.9e-16 88.6 46 71.7
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.9e-16 88.6 45 71.1
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 2.5e-16 88.2 59 62.7
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 2.5e-16 88.2 47 68.1
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 2.5e-16 88.2 63 52.4
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 3.2e-16 87.8 46 76.1
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 3.2e-16 87.8 46 76.1
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 3.2e-16 87.8 64 60.9
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 5.5e-16 87.0 52 61.5
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 5.5e-16 87.0 46 67.4
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 9.3e-16 86.3 45 68.9
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 2.1e-15 85.1 46 67.4
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 2.1e-15 85.1 52 61.5
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 2.1e-15 85.1 47 68.1
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 2.7e-15 84.7 47 63.8
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 3.6e-15 84.3 64 51.6
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 4.6e-15 84.0 44 75.0
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 4.6e-15 84.0 46 65.2
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 7.9e-15 83.2 43 69.8
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 1.0e-14 82.8 63 52.4
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.3e-14 82.4 53 66.0
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.3e-14 82.4 53 66.0
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 1.3e-14 82.4 48 66.7
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 3.0e-14 81.3 46 65.2
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 1.9e-13 78.6 52 55.8
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 5.7e-13 77.0 64 50.0
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 3.7e-12 74.3 50 56.0
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 3.1e-11 71.2 47 53.2
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 1.4e-08 62.4 62 41.9


User provided reference genes

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