Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 4.1e-72 274.6 140 100.0
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 1.5e-26 123.2 69 84.1
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 4.5e-26 121.7 70 82.9
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 7.6e-26 120.9 70 85.7
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 9.9e-26 120.6 71 83.1
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 9.9e-26 120.6 70 82.9
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 9.9e-26 120.6 71 80.3
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 1.3e-25 120.2 138 55.1
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.9e-25 119.0 70 82.9
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 3.8e-25 118.6 70 82.9
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 3.8e-25 118.6 70 82.9
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 6.4e-25 117.9 70 81.4
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.4e-24 115.9 70 81.4
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 4.2e-24 115.2 70 75.7
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 1.6e-23 113.2 68 80.9
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 2.7e-23 112.5 89 65.2
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 4.6e-23 111.7 68 79.4
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 4.6e-23 111.7 68 79.4
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 4.6e-23 111.7 102 64.7
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 6.0e-23 111.3 68 77.9
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 1.0e-22 110.5 70 74.3
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.3e-22 110.2 69 75.4
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 2.3e-22 109.4 61 83.6
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 3.9e-22 108.6 68 73.5
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 6.7e-22 107.8 70 75.7
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 2.5e-21 105.9 61 83.6
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 9.6e-21 104.0 70 71.4
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 9.6e-21 104.0 69 69.6
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 1.6e-20 103.2 70 71.4
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 1.6e-20 103.2 70 71.4
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 2.1e-20 102.8 71 64.8
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 2.8e-20 102.4 67 73.1
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 2.4e-19 99.4 68 72.1
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 5.3e-19 98.2 68 70.6
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 5.3e-19 98.2 70 67.1
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 6.9e-19 97.8 70 67.1
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.2e-18 97.1 70 70.0
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 1.2e-18 97.1 70 70.0
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 3.4e-18 95.5 67 71.6
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 4.5e-18 95.1 70 68.6
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 5.8e-18 94.7 70 68.6
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 7.6e-18 94.4 60 73.3
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 1.3e-17 93.6 67 70.1
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.2e-17 92.8 68 69.1
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 3.8e-17 92.0 68 64.7
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 6.5e-17 91.3 68 67.6
Glyma.09G123700 Glycine max HOM05D007950 ORTHO05D009951 8.4e-17 90.9 70 68.6
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 1.1e-16 90.5 66 62.1
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 5.5e-16 88.2 68 64.7
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 7.1e-16 87.8 70 60.0
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 9.3e-16 87.4 68 64.7
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 1.2e-15 87.0 61 72.1
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 1.2e-15 87.0 67 67.2
Sc08g0007460 Simmondsia chinensis HOM05D007950 ORTHO05D009951 2.7e-15 85.9 68 64.7
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 6.0e-15 84.7 70 58.6
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 1.0e-14 84.0 70 57.1
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 2.3e-14 82.8 70 57.1
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 3.0e-14 82.4 70 58.6
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 3.0e-14 82.4 70 58.6
Dinv36624 Davidia involucrata HOM05D007950 ORTHO05D009951 3.0e-14 82.4 68 67.6
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 8.7e-14 80.9 66 59.1
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 1.1e-13 80.5 53 69.8
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 1.5e-13 80.1 70 54.3
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 1.9e-13 79.7 66 57.6
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 1.9e-13 79.7 74 64.9
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 7.4e-13 77.8 74 58.1
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 9.6e-13 77.4 67 55.2
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 2.8e-12 75.9 65 53.8
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 6.3e-12 74.7 66 54.5
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.4e-11 73.6 71 54.9
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.8e-11 73.2 71 53.5
Lsat_1_v5_gn_5_103401 Lactuca sativa HOM05D007950 ORTHO05D009951 5.3e-11 71.6 70 51.4
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 9.0e-11 70.9 66 51.5
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 1.2e-10 70.5 72 52.8
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 1.5e-10 70.1 65 53.8
Sed0000041 Sechium edule HOM05D007950 ORTHO05D009951 2.0e-10 69.7 60 53.3
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 1.7e-09 66.6 70 45.7
HanXRQChr09g0275201 Helianthus annuus HOM05D007950 ORTHO05D009951 1.9e-08 63.2 74 39.2
Thhalv10012203m.g Eutrema salsugineum HOM05D007950 ORTHO05D009951 4.2e-08 62.0 68 45.6
Medtr6g086730 Medicago truncatula HOM05D007950 ORTHO05D009951 7.2e-08 61.2 50 60.0
Os06g0686900 Oryza sativa ssp. japonica HOM05D018973 ORTHO05D009951 3.0e-06 55.8 68 39.7


User provided reference genes

Program Settings