Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 2.8e-255 884.8 445 100.0
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 6.3e-199 697.6 402 86.3
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 2.4e-198 695.7 409 83.6
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 4.1e-198 694.9 433 79.2
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 5.3e-198 694.5 464 78.2
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 4.5e-197 691.4 438 79.7
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 7.7e-197 690.6 468 77.4
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 2.9e-196 688.7 443 79.5
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 2.5e-195 685.6 446 77.8
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 4.2e-195 684.9 443 79.9
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 4.2e-195 684.9 441 78.9
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 2.7e-194 682.2 422 79.6
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 6.1e-194 681.0 443 79.7
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 1.8e-193 679.5 440 77.7
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 1.8e-193 679.5 421 81.0
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 3.0e-193 678.7 439 79.3
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 5.1e-193 677.9 453 75.7
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 6.7e-193 677.6 466 76.6
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 2.0e-192 676.0 448 76.8
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 7.4e-192 674.1 453 77.3
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 1.7e-191 672.9 451 75.4
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 3.7e-191 671.8 441 77.1
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 1.1e-190 670.2 467 73.7
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 3.1e-190 668.7 435 78.4
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 1.2e-189 666.8 450 74.7
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 5.9e-189 664.5 387 84.5
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 3.8e-188 661.8 462 73.4
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 6.5e-188 661.0 439 77.9
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 8.5e-188 660.6 451 74.1
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 1.1e-187 660.2 435 77.2
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 1.4e-187 659.8 460 74.8
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 1.4e-187 659.8 446 76.9
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.5e-187 659.1 439 77.2
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 3.2e-187 658.7 444 76.4
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 1.6e-186 656.4 444 76.8
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 2.1e-186 656.0 375 86.4
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 2.7e-186 655.6 399 80.2
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 1.4e-185 653.3 457 75.7
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 5.1e-185 651.4 382 85.3
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 8.8e-185 650.6 438 77.2
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 2.0e-184 649.4 422 76.8
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 2.6e-184 649.0 435 75.6
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 4.4e-184 648.3 415 77.1
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 5.7e-184 647.9 438 75.6
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 7.4e-184 647.5 415 78.8
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 2.8e-183 645.6 453 74.8
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 4.8e-183 644.8 443 74.5
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 8.2e-183 644.0 444 73.2
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 4.1e-182 641.7 444 74.5
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 7.0e-182 641.0 382 83.0
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 9.1e-182 640.6 463 71.3
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 2.0e-181 639.4 421 76.2
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 4.5e-181 638.3 430 75.8
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 1.3e-180 636.7 415 78.8
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 1.7e-180 636.3 430 75.8
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 2.2e-180 636.0 440 75.2
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 8.5e-180 634.0 431 75.4
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 1.1e-179 633.6 446 73.5
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 1.9e-179 632.9 422 75.6
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 2.5e-179 632.5 446 73.5
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 3.2e-179 632.1 435 73.3
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 4.2e-179 631.7 439 73.6
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 9.4e-179 630.6 448 72.3
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 6.7e-177 624.4 422 76.8
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 2.0e-176 622.9 445 70.8
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 3.3e-176 622.1 421 73.6
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 7.4e-176 620.9 386 79.3
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 7.4e-176 620.9 430 74.4
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 1.7e-175 619.8 375 80.8
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 8.2e-175 617.5 443 72.9
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.8e-174 616.3 447 72.3
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 3.1e-174 615.5 421 73.2
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 3.1e-174 615.5 431 73.8
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 7.0e-174 614.4 380 79.5
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 3.5e-173 612.1 443 72.5
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 1.3e-172 610.1 457 72.6
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 1.7e-172 609.8 437 72.1
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 1.1e-171 607.1 425 70.8
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 1.9e-171 606.3 430 70.9
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 1.4e-169 600.1 423 70.7
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 2.3e-169 599.4 424 71.7
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 5.2e-169 598.2 423 70.2
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 5.2e-169 598.2 446 68.8
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 2.0e-168 596.3 394 74.6
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 1.3e-167 593.6 431 69.6
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 2.8e-167 592.4 431 68.0
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 6.3e-167 591.3 448 67.0
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 8.3e-167 590.9 427 69.8
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 1.8e-166 589.7 393 74.6
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 1.0e-164 583.9 398 72.9
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 2.2e-164 582.8 436 71.6
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 7.2e-163 577.8 426 67.8
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 7.2e-163 577.8 426 67.8
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 1.4e-161 573.5 431 67.1
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 2.3e-161 572.8 431 66.8
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 2.3e-161 572.8 431 66.8
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 1.9e-155 553.1 315 86.0
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 9.5e-155 550.8 440 65.7
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 5.4e-150 535.0 400 66.8
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 5.0e-148 528.5 429 61.5
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 1.1e-147 527.3 388 67.3
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 6.1e-146 521.5 345 76.5
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.2e-141 507.3 374 72.5
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 3.6e-114 416.0 373 59.2
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 9.9e-112 407.9 261 79.7
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 7.3e-107 391.7 385 53.0
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 4.8e-106 389.0 400 51.2
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 1.7e-103 380.6 359 53.5
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 6.4e-103 378.6 388 49.5
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 2.8e-98 363.2 371 50.7
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 3.4e-96 356.3 396 49.5
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.5e-83 314.3 364 48.1
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 5.3e-81 305.8 340 47.1
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 7.2e-78 295.4 396 44.7
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 1.1e-59 235.0 136 77.9
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 9.8e-51 205.3 254 49.2
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 1.8e-44 184.5 104 85.6
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 2.9e-39 167.2 99 72.7
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.6e-32 144.8 83 86.7
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.3e-31 141.7 83 86.7
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 9.5e-30 135.6 286 35.7
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 4.7e-29 133.3 262 36.3
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.2e-27 128.6 73 86.3
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 1.5e-27 128.3 89 75.3
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 1.1e-25 122.1 121 62.0
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 3.2e-25 120.6 83 77.1
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 1.3e-23 115.2 371 29.1
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 4.4e-19 100.1 116 54.3
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 4.6e-16 90.1 73 67.1
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 3.3e-14 84.0 53 75.5
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.2e-13 82.0 107 49.5
Lsat_1_v5_gn_5_96001 Lactuca sativa HOM05D005548 ORTHO05D029961 2.1e-08 64.7 74 47.3
TPR.G36012 Trifolium pratense HOM05D005548 ORTHO05D007497 1.5e-06 58.5 79 44.3


User provided reference genes

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