Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015348001 Vitis vinifera HOM05D006031 ORTHO05D007417 1.1e-122 443.4 221 100.0
COL.COLO4_34809 Corchorus olitorius HOM05D006031 ORTHO05D007417 1.9e-103 379.4 207 87.9
QL02p044744 Quercus lobata HOM05D006031 ORTHO05D007417 9.3e-103 377.1 206 87.9
Atru.chr7.1388 Acer truncatum HOM05D006031 ORTHO05D007417 1.8e-101 372.9 209 86.6
Dinv41637 Davidia involucrata HOM05D006031 ORTHO05D007417 2.3e-101 372.5 208 85.1
TWI63G0954 Tripterygium wilfordii HOM05D006031 ORTHO05D007417 8.7e-101 370.5 209 86.1
CANSAT56G1289 Cannabis sativa HOM05D006031 ORTHO05D007417 1.1e-100 370.2 206 86.4
CiPaw.03G228000 Carya illinoinensis HOM05D006031 ORTHO05D007417 1.1e-100 370.2 206 85.9
Gorai.010G073700 Gossypium raimondii HOM05D006031 ORTHO05D007417 1.9e-100 369.4 210 84.3
RcHm_v2.0_Chr2g0091271 Rosa chinensis HOM05D006031 ORTHO05D007417 1.9e-100 369.4 211 83.9
Manes.03G024000 Manihot esculenta HOM05D006031 ORTHO05D007417 5.6e-100 367.9 213 84.5
Gohir.A06G064600 Gossypium hirsutum HOM05D006031 ORTHO05D007417 9.6e-100 367.1 210 83.8
Gohir.D06G063200 Gossypium hirsutum HOM05D006031 ORTHO05D007417 9.6e-100 367.1 210 83.8
Thecc.09G105700 Theobroma cacao HOM05D006031 ORTHO05D007417 9.6e-100 367.1 209 84.7
MD02G1057400 Malus domestica HOM05D006031 ORTHO05D007417 2.8e-99 365.5 206 85.4
Actinidia20400 Actinidia chinensis HOM05D006031 ORTHO05D007417 6.2e-99 364.4 207 83.1
Hma1.2p1_0945F.1_g240050 Hydrangea macrophylla HOM05D006031 ORTHO05D007417 4.0e-98 361.7 206 83.5
AUR62021455 Chenopodium quinoa HOM05D006031 ORTHO05D007417 6.9e-98 360.9 205 84.9
PGR102G2811 Punica granatum HOM05D006031 ORTHO05D007417 6.9e-98 360.9 207 83.1
Sabra18G0072100 Salix brachista HOM05D006031 ORTHO05D007417 1.5e-97 359.8 209 81.8
FAN23G2797 Fragaria x ananassa HOM05D006031 ORTHO05D007417 3.4e-97 358.6 206 83.0
Lalb_Chr22g0352651 Lupinus albus HOM05D006031 ORTHO05D007417 3.4e-97 358.6 207 81.2
MBI04_g14932_MAGBIO Magnolia biondii HOM05D006031 ORTHO05D007417 3.4e-97 358.6 205 82.4
FvH4_1g05640 Fragaria vesca HOM05D006031 ORTHO05D007417 5.8e-97 357.8 206 83.0
PSO566G0179 Papaver somniferum HOM05D006031 ORTHO05D007417 7.6e-97 357.5 209 80.9
Cc06_g10050 Coffea canephora HOM05D006031 ORTHO05D007417 1.3e-96 356.7 209 81.3
Potri.018G083800 Populus trichocarpa HOM05D006031 ORTHO05D007417 1.3e-96 356.7 209 80.9
FAN26G0948 Fragaria x ananassa HOM05D006031 ORTHO05D007417 1.7e-96 356.3 206 82.0
FAN26G3395 Fragaria x ananassa HOM05D006031 ORTHO05D007417 1.7e-96 356.3 206 82.0
PSO782G0755 Papaver somniferum HOM05D006031 ORTHO05D007417 1.7e-96 356.3 209 80.9
Cpa.g.sc12.30 Carica papaya HOM05D006031 ORTHO05D007417 2.9e-96 355.5 208 81.7
Ca_25548_v3 Cicer arietinum L. HOM05D006031 ORTHO05D007417 2.9e-96 355.5 205 82.9
Eucgr.C03802 Eucalyptus grandis HOM05D006031 ORTHO05D007417 2.9e-96 355.5 206 83.0
Lsat_1_v5_gn_4_6541 Lactuca sativa HOM05D006031 ORTHO05D007417 3.8e-96 355.1 206 80.1
TAR624G0502 Trochodendron aralioides HOM05D006031 ORTHO05D007417 3.8e-96 355.1 205 83.9
VMungo0464G0135 Vigna mungo HOM05D006031 ORTHO05D007417 3.8e-96 355.1 205 82.9
Ciclev10009448m.g Citrus clementina HOM05D006031 ORTHO05D007417 6.5e-96 354.4 217 82.0
MELO3C004569.2 Cucumis melo HOM05D006031 ORTHO05D007417 8.4e-96 354.0 209 79.9
CsaV3_2G002120 Cucumis sativus L. HOM05D006031 ORTHO05D007417 1.4e-95 353.2 209 79.9
Sc18g0001360 Simmondsia chinensis HOM05D006031 ORTHO05D007417 1.4e-95 353.2 205 79.5
Aqoxy7G01527 Aquilegia oxysepala HOM05D006031 ORTHO05D007417 1.9e-95 352.8 209 81.8
Glyma.01G145300 Glycine max HOM05D006031 ORTHO05D007417 2.5e-95 352.4 205 82.4
arahy.Tifrunner.gnm1.ann1.4UU729 Arachis hypogaea HOM05D006031 ORTHO05D007417 4.2e-95 351.7 207 82.1
Nn2g11655 Nelumbo nucifera HOM05D006031 ORTHO05D007417 4.2e-95 351.7 205 83.4
TPR.G34905 Trifolium pratense HOM05D006031 ORTHO05D007417 4.2e-95 351.7 209 79.9
arahy.Tifrunner.gnm1.ann1.P4D2XC Arachis hypogaea HOM05D006031 ORTHO05D007417 5.5e-95 351.3 207 82.1
Medtr1g035260 Medicago truncatula HOM05D006031 ORTHO05D007417 1.2e-94 350.1 213 78.4
Solyc12g006030.2 Solanum lycopersicum HOM05D006031 ORTHO05D007417 1.2e-94 350.1 207 80.7
Migut.K00493 Erythranthe guttata HOM05D006031 ORTHO05D007417 1.6e-94 349.7 209 78.9
Phvul.004G168000 Phaseolus vulgaris HOM05D006031 ORTHO05D007417 2.7e-94 349.0 207 80.2
Sopen12g002000 Solanum pennellii HOM05D006031 ORTHO05D007417 2.7e-94 349.0 207 80.7
CAN.G478.5 Capsicum annuum HOM05D006031 ORTHO05D007417 3.5e-94 348.6 207 79.7
EL10Ac8g18430 Beta vulgaris HOM05D006031 ORTHO05D007417 1.3e-93 346.7 207 81.2
ClCG11G002340 Citrullus lanatus HOM05D006031 ORTHO05D007417 1.3e-93 346.7 234 72.2
ECA234G3380 Erigeron canadensis HOM05D006031 ORTHO05D007417 3.9e-93 345.1 205 80.0
Hund26230 Selenicereus undatus HOM05D006031 ORTHO05D007417 5.1e-93 344.7 205 80.0
AUR62010942 Chenopodium quinoa HOM05D006031 ORTHO05D007417 1.5e-92 343.2 205 81.5
Nitab4.5_0000952g0030 Nicotiana tabacum HOM05D006031 ORTHO05D007417 1.9e-92 342.8 207 77.8
Aa31LG2G21560 Aethionema arabicum HOM05D006031 ORTHO05D007417 5.7e-92 341.3 206 78.2
HanXRQChr17g0570151 Helianthus annuus HOM05D006031 ORTHO05D007417 5.7e-92 341.3 206 77.2
THA.LOC104804018 Tarenaya hassleriana HOM05D006031 ORTHO05D007417 5.7e-92 341.3 205 79.0
A03p58440 Brassica napus HOM05D006031 ORTHO05D007417 7.4e-92 340.9 208 77.4
BraA03t14904Z Brassica rapa HOM05D006031 ORTHO05D007417 1.6e-91 339.7 208 76.9
Actinidia09434 Actinidia chinensis HOM05D006031 ORTHO05D007417 2.1e-91 339.3 209 79.9
BolC7t46125H Brassica oleracea HOM05D006031 ORTHO05D007417 4.8e-91 338.2 208 76.9
CSS0004856 Camellia sinensis var. sinensis HOM05D006031 ORTHO05D007417 4.8e-91 338.2 208 79.3
BcaC09g51657 Brassica carinata HOM05D006031 ORTHO05D007417 6.3e-91 337.8 208 76.9
BolC1t01025H Brassica oleracea HOM05D006031 ORTHO05D007417 6.3e-91 337.8 208 76.9
C01p10630 Brassica napus HOM05D006031 ORTHO05D007417 8.2e-91 337.4 208 76.9
BraA01t00856Z Brassica rapa HOM05D006031 ORTHO05D007417 8.2e-91 337.4 208 77.4
Nitab4.5_0000010g0020 Nicotiana tabacum HOM05D006031 ORTHO05D007417 8.2e-91 337.4 207 76.8
Thhalv10026253m.g Eutrema salsugineum HOM05D006031 ORTHO05D007417 1.1e-90 337.0 207 78.3
C07p56460 Brassica napus HOM05D006031 ORTHO05D007417 1.4e-90 336.7 208 76.4
SalBow3G0984 Salvia bowleyana HOM05D006031 ORTHO05D007417 1.8e-90 336.3 213 76.1
A01p09080 Brassica napus HOM05D006031 ORTHO05D007417 2.4e-90 335.9 208 77.4
Carub.0007s1181 Capsella rubella HOM05D006031 ORTHO05D007417 3.1e-90 335.5 208 76.4
BcaNung01361 Brassica carinata HOM05D006031 ORTHO05D007417 5.3e-90 334.7 208 76.0
Peaxi162Scf00539g00717 Petunia axillaris HOM05D006031 ORTHO05D007417 9.0e-90 334.0 207 76.8
Sp7g26830 Schrenkiella parvula HOM05D006031 ORTHO05D007417 2.6e-89 332.4 208 76.4
AL7G23660 Arabidopsis lyrata HOM05D006031 ORTHO05D007417 4.5e-89 331.6 207 76.3
AT4G28830 Arabidopsis thaliana HOM05D006031 ORTHO05D007417 4.5e-89 331.6 208 75.0
BcaC06g32602 Brassica carinata HOM05D006031 ORTHO05D007417 7.6e-89 330.9 206 75.7
HPP92_005270 Vanilla planifolia HOM05D006031 ORTHO05D007417 2.5e-87 325.9 210 73.8
vmacro10877 Vaccinium macrocarpon HOM05D006031 ORTHO05D007417 7.2e-87 324.3 207 76.3
Ah.09g230920 Amaranthus hybridus HOM05D006031 ORTHO05D007417 1.2e-86 323.6 186 81.7
ATR0315G117 Amborella trichopoda HOM05D006031 ORTHO05D007417 2.1e-86 322.8 209 72.7
CDE02G2180 Ceratophyllum demersum HOM05D006031 ORTHO05D007417 2.7e-86 322.4 215 71.6
Os06g0162600 Oryza sativa ssp. japonica HOM05D006031 ORTHO05D007417 3.6e-86 322.0 206 73.3
Cfa003225 Carpinus fangiana HOM05D006031 ORTHO05D007417 4.6e-86 321.6 211 78.2
Duzib150G0325 Durio zibethinus HOM05D006031 ORTHO05D007417 6.1e-86 321.2 209 77.0
Zm00001eb271370 Zea mays HOM05D006031 ORTHO05D007417 3.9e-85 318.5 209 73.7
Mapoly0136s0020 Marchantia polymorpha HOM05D006031 ORTHO05D007417 1.3e-83 313.5 203 71.9
SGA_v2.0_scaffold387G50523 Striga asiatica HOM05D006031 ORTHO05D007417 1.4e-82 310.1 209 70.8
Prupe.7G225500 Prunus persica HOM05D006031 ORTHO05D007417 6.9e-82 307.8 178 83.1
unitig_62.g23476 Utricularia gibba HOM05D006031 ORTHO05D007417 1.3e-80 303.5 214 69.6
AagrBONN_evm.TU.Sc2ySwM_228.3645 Anthoceros agrestis HOM05D006031 ORTHO05D007417 3.2e-79 298.9 203 68.5
Dinv41633 Davidia involucrata HOM05D006031 ORTHO05D007417 1.2e-78 297.0 169 83.4
ClCG06G015420 Citrullus lanatus HOM05D006031 ORTHO05D007417 1.8e-77 293.1 177 77.4
Pp3c6_12910 Physcomitrium patens HOM05D006031 ORTHO05D007417 1.8e-77 293.1 203 68.0
Haze_25783 Corylus avellana HOM05D006031 ORTHO05D007417 3.0e-77 292.4 192 77.6
CARHR236620 Cardamine hirsuta HOM05D006031 ORTHO05D007417 3.3e-76 288.9 207 69.6
SMO304G0145 Selaginella moellendorffii HOM05D006031 ORTHO05D007417 3.3e-76 288.9 203 69.0
Hma1.2p1_0945F.1_g240060 Hydrangea macrophylla HOM05D006031 ORTHO05D007417 1.3e-75 287.0 166 81.3
SMO164G0018 Selaginella moellendorffii HOM05D006031 ORTHO05D007417 2.2e-75 286.2 203 68.5
Lj2g0026722 Lotus japonicus HOM05D006031 ORTHO05D007417 2.7e-70 269.2 157 81.5
Rhsim05G0043800 Rhododendron simsii HOM05D006031 ORTHO05D000070 1.4e-69 266.9 251 56.6
Psat1g044640 Pisum sativum HOM05D006031 ORTHO05D007417 2.8e-67 259.2 157 77.7
MSTRG.26365 Avicennia marina HOM05D006031 ORTHO05D007417 2.2e-64 249.6 157 76.4
PGSC0003DMG400013889 Solanum tuberosum HOM05D000011 ORTHO05D007417 1.9e-63 246.5 191 65.4
Sed0012983 Sechium edule HOM05D006031 ORTHO05D007417 2.0e-57 226.5 137 76.6
Cre08.g384700 Chlamydomonas reinhardtii HOM05D006031 ORTHO05D007417 3.8e-56 222.2 211 52.6
CBR_g49195 Chara braunii HOM05D005459 ORTHO05D006751 7.2e-55 218.0 182 58.8
PRCOL_00003743 Prasinoderma coloniale HOM05D006031 ORTHO05D007417 1.5e-52 210.3 214 50.5
arahy.Tifrunner.gnm1.ann1.PEIA6U Arachis hypogaea HOM05D006031 ORTHO05D007417 4.4e-52 208.8 155 67.7
DCAR_012059 Daucus carota HOM05D006031 ORTHO05D007417 5.4e-50 201.8 142 70.4
Zm00001eb271350 Zea mays HOM05D006031 ORTHO05D007417 1.8e-45 186.8 127 70.1
Zm00001eb442390 Zea mays HOM05D006031 ORTHO05D007417 1.8e-45 186.8 127 70.1
MCO05G480 Micromonas commoda HOM05D006031 ORTHO05D007417 2.3e-45 186.4 210 49.5
Lj4A429T15 Lonicera japonica HOM05D006031 ORTHO05D007417 4.3e-39 165.6 95 84.2
Haze_26211 Corylus avellana HOM05D006031 ORTHO05D007417 1.4e-37 160.6 223 40.8
Haze_27462 Corylus avellana HOM05D006031 ORTHO05D007417 1.4e-37 160.6 223 40.8
PRCOL_00005480 Prasinoderma coloniale HOM05D006031 ORTHO05D007417 6.0e-25 118.6 203 36.5
Lsat_1_v5_gn_8_38160 Lactuca sativa HOM05D006031 ORTHO05D007417 2.3e-24 116.7 104 58.7
BcaC09g51665 Brassica carinata HOM05D006031 ORTHO05D007417 1.3e-19 100.9 89 57.3
AUR62033208 Chenopodium quinoa HOM05D003603 ORTHO05D004186 6.4e-19 98.6 53 86.8
AUR62044225 Chenopodium quinoa HOM05D003603 ORTHO05D004186 6.4e-19 98.6 52 88.5
SEGI_07643 Sequoiadendron giganteum HOM05D006031 ORTHO05D007417 2.4e-18 96.7 72 61.1
VMungo0464G0776 Vigna mungo HOM05D000002 ORTHO05D000001 3.3e-15 86.3 65 67.7
SEGI_21752 Sequoiadendron giganteum HOM05D006031 ORTHO05D007417 7.3e-15 85.1 57 68.4
Zm00001eb271390 Zea mays HOM05D006031 ORTHO05D007417 7.3e-15 85.1 53 77.4
Glyma.09G193200 Glycine max HOM05D006031 ORTHO05D007417 1.6e-14 84.0 73 57.5
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 3.8e-11 72.8 38 89.5
MBI06_g04307_MAGBIO Magnolia biondii HOM05D006031 ORTHO05D007417 5.4e-10 68.9 134 38.1
Medtr6g087210 Medicago truncatula HOM05D006031 ORTHO05D007417 5.4e-10 68.9 46 69.6
PGSC0003DMG400015828 Solanum tuberosum HOM05D000124 ORTHO05D397188 6.0e-09 65.5 36 72.2
Thhalv10002738m.g Eutrema salsugineum HOM05D006031 ORTHO05D007417 3.9e-08 62.8 39 76.9
Lsat_1_v5_gn_2_108580 Lactuca sativa HOM05D006031 ORTHO05D007417 3.9e-08 62.8 39 84.6
arahy.Tifrunner.gnm1.ann1.43H8SX Arachis hypogaea HOM05D000371 ORTHO05D013217 6.6e-08 62.0 53 52.8
COL.COLO4_34793 Corchorus olitorius HOM05D006031 ORTHO05D007417 8.6e-08 61.6 33 84.8


User provided reference genes

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