Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 3.9e-67 258.1 137 100.0
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 9.7e-50 200.3 136 77.2
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 2.4e-48 195.7 134 73.1
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 4.5e-47 191.4 136 72.8
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 7.7e-47 190.7 136 72.8
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 1.7e-46 189.5 137 72.3
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 6.5e-46 187.6 128 75.8
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 9.4e-45 183.7 137 70.1
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 1.2e-44 183.3 135 68.9
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 1.6e-44 183.0 137 71.5
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 2.1e-44 182.6 135 70.4
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 2.7e-44 182.2 137 68.6
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 3.6e-44 181.8 135 70.4
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 4.6e-44 181.4 135 70.4
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 6.1e-44 181.0 137 67.2
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 7.9e-44 180.6 137 70.1
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.0e-43 180.3 137 69.3
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.0e-43 180.3 136 69.9
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 1.4e-43 179.9 137 70.8
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 2.3e-43 179.1 137 70.8
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 3.9e-43 178.3 136 69.9
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 5.1e-43 177.9 136 69.1
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 8.8e-43 177.2 136 69.1
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.1e-42 176.8 136 69.1
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.5e-42 176.4 136 68.4
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 1.5e-42 176.4 137 69.3
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 1.5e-42 176.4 137 69.3
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 2.0e-42 176.0 137 68.6
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 2.0e-42 176.0 136 69.1
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 2.0e-42 176.0 136 69.1
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 3.3e-42 175.3 138 63.8
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 3.3e-42 175.3 137 67.9
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 4.3e-42 174.9 142 66.2
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 4.3e-42 174.9 137 66.4
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 5.7e-42 174.5 136 66.2
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 5.7e-42 174.5 135 69.6
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 9.7e-42 173.7 133 72.2
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 9.7e-42 173.7 133 72.2
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 1.3e-41 173.3 138 65.9
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 1.3e-41 173.3 137 67.9
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 1.7e-41 172.9 137 63.5
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 1.1e-40 170.2 137 67.9
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 1.8e-40 169.5 135 66.7
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 2.4e-40 169.1 135 67.4
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 4.1e-40 168.3 135 63.0
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 4.1e-40 168.3 137 61.3
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 5.3e-40 167.9 133 61.7
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 5.3e-40 167.9 133 61.7
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 5.3e-40 167.9 123 71.5
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 6.9e-40 167.5 135 65.9
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 1.5e-39 166.4 134 62.7
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 1.5e-39 166.4 130 70.8
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 2.0e-39 166.0 136 63.2
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 3.4e-39 165.2 135 65.2
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 4.5e-39 164.9 138 66.7
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 5.9e-39 164.5 136 61.0
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 7.7e-39 164.1 135 63.0
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 7.7e-39 164.1 135 63.0
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 1.0e-38 163.7 123 69.9
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 1.7e-38 162.9 133 65.4
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 2.2e-38 162.5 138 65.2
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 2.2e-38 162.5 138 65.2
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 3.8e-38 161.8 122 68.9
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 5.0e-38 161.4 123 69.9
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 8.5e-38 160.6 127 68.5
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 8.5e-38 160.6 114 71.9
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 1.9e-37 159.5 122 65.6
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 2.5e-37 159.1 128 65.6
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 2.5e-37 159.1 131 67.9
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 2.5e-37 159.1 138 63.8
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 5.5e-37 157.9 133 62.4
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 7.2e-37 157.5 118 71.2
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 2.1e-36 156.0 131 61.1
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 2.7e-36 155.6 125 64.8
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 2.7e-36 155.6 131 65.6
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 6.1e-36 154.5 136 59.6
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 1.0e-35 153.7 134 64.9
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 3.0e-35 152.1 117 64.1
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 5.1e-35 151.4 117 66.7
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 5.1e-35 151.4 133 60.9
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 1.1e-34 150.2 127 59.8
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 3.3e-34 148.7 128 60.2
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 9.7e-34 147.1 123 64.2
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 9.7e-34 147.1 135 59.3
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 2.8e-33 145.6 113 69.9
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 6.3e-33 144.4 105 67.6
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 2.4e-32 142.5 133 58.6
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 7.0e-32 141.0 123 61.0
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 2.6e-31 139.0 128 64.1
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 5.9e-31 137.9 131 60.3
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 1.9e-29 132.9 123 60.2
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 1.6e-28 129.8 128 60.2
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 6.1e-28 127.9 134 53.0
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 2.3e-27 125.9 107 60.7
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 6.3e-25 117.9 116 60.3
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 1.4e-24 116.7 127 50.4
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 3.5e-23 112.1 95 63.2
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 7.7e-23 110.9 128 48.4
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 1.5e-18 96.7 130 42.3
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 1.8e-16 89.7 128 43.8
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 8.8e-11 70.9 51 74.5
MBI05_g24448_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 9.8e-10 67.4 70 58.6


User provided reference genes

Program Settings