Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 5.3e-167 590.9 287 100.0
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 1.2e-107 393.7 268 70.9
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 1.8e-106 389.8 300 65.3
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 6.8e-106 387.9 286 65.0
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 1.3e-104 383.6 289 66.1
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 1.2e-102 377.1 272 67.6
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 1.0e-101 374.0 269 67.3
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 3.0e-101 372.5 276 65.9
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 3.9e-101 372.1 269 67.7
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 5.1e-101 371.7 270 65.9
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 1.9e-100 369.8 270 67.8
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 5.3e-98 361.7 273 63.0
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 5.3e-98 361.7 282 62.4
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 9.0e-98 360.9 288 62.2
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 1.2e-97 360.5 283 62.9
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 1.2e-97 360.5 287 61.7
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 1.2e-97 360.5 288 62.2
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 2.6e-97 359.4 283 62.5
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 4.4e-97 358.6 314 60.5
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 1.3e-96 357.1 273 64.1
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 2.9e-96 355.9 284 61.3
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 3.8e-96 355.5 289 62.3
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 4.9e-96 355.1 282 62.1
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 6.4e-96 354.8 280 62.5
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 3.2e-95 352.4 268 63.4
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 9.3e-95 350.9 271 63.1
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 9.3e-95 350.9 285 59.6
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 1.2e-94 350.5 279 59.1
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 1.2e-94 350.5 267 64.4
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 1.2e-94 350.5 285 59.6
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 2.1e-94 349.7 272 62.5
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 3.5e-94 349.0 269 62.5
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 3.5e-94 349.0 291 59.1
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 6.0e-94 348.2 272 63.2
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 7.8e-94 347.8 269 62.8
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 7.8e-94 347.8 294 59.2
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 1.0e-93 347.4 292 59.2
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 1.0e-93 347.4 255 65.1
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.7e-93 346.7 268 63.8
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 3.9e-93 345.5 266 63.5
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 5.1e-93 345.1 284 60.2
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 6.6e-93 344.7 283 60.1
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 8.7e-93 344.4 266 60.9
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 1.1e-92 344.0 266 63.5
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 1.5e-92 343.6 267 64.0
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 2.5e-92 342.8 267 62.9
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 5.6e-92 341.7 287 59.6
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 1.6e-91 340.1 283 59.0
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.1e-91 339.7 267 62.5
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 2.8e-91 339.3 271 59.8
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 3.6e-91 339.0 285 59.6
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 8.1e-91 337.8 269 59.9
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 1.4e-90 337.0 284 59.2
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 1.4e-90 337.0 292 57.9
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 1.8e-90 336.7 283 59.7
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.4e-90 336.3 268 60.1
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 4.0e-90 335.5 284 58.1
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 5.3e-90 335.1 290 58.6
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 5.3e-90 335.1 272 59.6
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 6.9e-90 334.7 289 58.8
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 3.4e-89 332.4 285 57.2
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 5.8e-89 331.6 284 58.8
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 5.8e-89 331.6 280 59.6
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 1.7e-88 330.1 270 60.4
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 6.4e-88 328.2 241 67.2
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 8.4e-88 327.8 252 63.5
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 7.1e-87 324.7 270 59.6
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 1.6e-86 323.6 270 60.0
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 1.6e-86 323.6 268 60.4
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 1.6e-86 323.6 268 60.4
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 2.7e-86 322.8 267 59.9
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 6.0e-86 321.6 267 61.0
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 6.0e-86 321.6 267 61.0
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 1.3e-85 320.5 262 60.3
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 2.3e-85 319.7 286 56.3
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 3.9e-85 318.9 267 59.6
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 6.7e-85 318.2 267 60.7
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 6.7e-85 318.2 268 59.3
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 8.7e-85 317.8 281 58.7
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 7.4e-84 314.7 286 55.2
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 9.6e-84 314.3 268 58.2
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 9.6e-84 314.3 268 58.2
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 9.6e-84 314.3 271 55.4
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 8.1e-83 311.2 223 68.6
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 1.4e-82 310.5 253 58.1
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 3.1e-82 309.3 305 52.5
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 6.9e-82 308.1 283 54.1
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 5.8e-81 305.1 279 53.8
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 2.2e-80 303.1 255 58.4
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 3.8e-80 302.4 287 55.1
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 2.5e-79 299.7 216 65.3
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.2e-78 297.4 287 54.0
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 3.5e-78 295.8 267 54.3
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 3.0e-77 292.7 252 57.9
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 3.9e-77 292.4 254 57.5
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 3.7e-75 285.8 269 55.8
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 6.2e-75 285.0 289 53.6
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 3.1e-74 282.7 289 52.6
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 2.9e-72 276.2 273 53.8
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 6.5e-72 275.0 256 57.0
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 1.2e-70 270.8 286 53.1
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 1.1e-66 257.7 277 49.1
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 3.1e-66 256.1 195 64.6
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 5.9e-65 251.9 271 50.9
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 3.8e-64 249.2 348 39.7
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 2.5e-63 246.5 197 60.9
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 2.5e-63 246.5 256 50.8
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 2.1e-62 243.4 308 42.2
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 4.3e-60 235.7 287 43.2
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 1.4e-58 230.7 275 43.6
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 7.2e-55 218.4 280 44.6
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 9.4e-55 218.0 224 51.8
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 9.4e-55 218.0 224 51.8
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.1e-52 211.1 221 51.1
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.1e-52 211.1 221 51.1
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 2.2e-51 206.8 212 51.4
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 9.1e-50 201.4 292 37.3
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 7.7e-49 198.4 194 51.0
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.9e-48 196.4 227 48.0
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 3.6e-46 189.5 251 41.4
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 5.7e-44 182.2 167 58.1
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 7.0e-42 175.3 178 50.6
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 7.7e-41 171.8 124 67.7
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 1.1e-39 167.9 429 28.0
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 3.2e-39 166.4 141 59.6
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 7.2e-39 165.2 148 59.5
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 9.4e-39 164.9 153 56.2
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 8.8e-37 158.3 308 34.4
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 4.5e-33 146.0 183 45.4
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 2.8e-27 126.7 339 29.2
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 1.4e-26 124.4 386 26.7
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 5.4e-26 122.5 73 75.3
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 7.0e-26 122.1 166 43.4
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 1.2e-25 121.3 147 44.2
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 2.0e-25 120.6 102 57.8
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 1.1e-23 114.8 147 41.5
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 6.1e-22 109.0 195 35.9
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 1.2e-20 104.8 53 83.0
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 1.2e-20 104.8 142 44.4
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 1.3e-16 91.3 56 75.0
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.9e-15 87.4 51 68.6
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 8.0e-14 82.0 98 43.9
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 6.6e-08 62.4 38 68.4
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 6.6e-08 62.4 38 68.4
CiPaw.05G218700 Carya illinoinensis HOM05D004971 ORTHO05D006289 2.5e-07 60.5 47 61.7
MBI19_g24592_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 3.6e-06 56.6 38 57.9
Nitab4.5_0001706g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 4.7e-06 56.2 29 75.9


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