Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 3.6e-312 1074.7 521 100.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.2e-233 813.1 523 74.6
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 7.0e-226 787.3 519 75.5
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 6.0e-225 784.3 518 73.4
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 1.0e-224 783.5 522 73.4
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 1.1e-223 780.0 522 72.8
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 1.6e-222 776.2 522 71.6
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 9.8e-220 766.9 517 72.3
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 8.6e-216 753.8 516 70.3
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 1.1e-215 753.4 513 72.1
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 2.5e-215 752.3 523 70.6
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 4.7e-214 748.0 536 69.4
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 1.4e-213 746.5 518 70.7
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 6.8e-213 744.2 519 68.6
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 2.2e-211 739.2 492 74.8
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 6.4e-211 737.6 519 70.9
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 8.3e-211 737.3 529 67.9
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 1.9e-210 736.1 521 69.9
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 3.2e-210 735.3 528 68.2
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.7e-209 732.3 522 69.2
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 3.5e-209 731.9 515 69.3
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.3e-208 729.9 522 69.3
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 3.9e-208 728.4 517 68.9
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 3.9e-208 728.4 525 69.0
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 6.6e-208 727.6 522 68.8
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 1.5e-207 726.5 520 68.5
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 7.3e-207 724.2 522 68.6
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 1.2e-206 723.4 525 68.0
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.6e-206 721.8 522 68.8
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 4.7e-206 721.5 523 68.3
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 1.4e-205 719.9 516 68.6
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 2.4e-205 719.2 523 68.1
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 4.4e-204 714.9 522 69.3
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 1.7e-203 713.0 627 59.3
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 2.9e-203 712.2 523 66.5
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 3.8e-203 711.8 525 67.4
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 8.4e-203 710.7 506 68.2
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.4e-202 709.9 524 66.8
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 3.2e-202 708.8 534 65.5
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 5.4e-202 708.0 509 68.2
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 4.6e-201 704.9 516 66.7
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 1.0e-200 703.7 519 66.3
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 5.1e-200 701.4 522 67.8
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 3.3e-199 698.7 519 67.2
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 7.3e-199 697.6 516 66.1
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 3.6e-198 695.3 516 65.7
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 4.7e-198 694.9 515 66.0
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 3.1e-197 692.2 516 66.1
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 9.0e-197 690.6 520 66.0
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 9.0e-197 690.6 513 66.1
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 1.5e-196 689.9 516 65.5
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 2.6e-196 689.1 520 65.2
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 3.4e-196 688.7 542 63.5
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 2.4e-194 682.6 512 64.8
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 2.5e-191 672.5 512 66.0
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 4.8e-190 668.3 482 69.1
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 3.1e-189 665.6 529 62.0
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 4.5e-188 661.8 506 65.6
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 9.9e-188 660.6 508 64.2
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 2.9e-187 659.1 475 68.6
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 8.4e-187 657.5 561 59.4
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 5.4e-186 654.8 519 63.8
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 5.1e-184 648.3 604 55.8
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 6.2e-182 641.3 518 62.7
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 6.2e-182 641.3 474 67.7
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 1.4e-181 640.2 526 62.9
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 4.0e-181 638.6 526 62.7
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 2.0e-180 636.3 466 68.5
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 4.9e-179 631.7 527 58.6
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.4e-178 630.2 519 61.5
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 6.0e-177 624.8 476 65.8
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 6.7e-176 621.3 522 61.5
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 1.1e-175 620.5 448 68.8
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.5e-175 620.2 424 73.6
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 1.8e-173 613.2 463 67.0
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 1.0e-171 607.4 521 59.3
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 2.9e-171 605.9 409 72.4
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 3.8e-171 605.5 607 54.7
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 4.9e-171 605.1 443 67.0
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 3.2e-170 602.4 444 67.8
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 1.1e-167 594.0 431 69.8
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 2.8e-166 589.3 430 67.4
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 1.0e-160 570.9 409 68.9
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 5.7e-159 565.1 543 52.9
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 2.8e-158 562.8 447 63.8
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 1.1e-157 560.8 376 72.6
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.4e-157 560.5 410 67.8
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 5.0e-155 552.0 401 68.1
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 4.2e-154 548.9 412 66.7
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 2.0e-148 530.0 377 67.6
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 1.9e-146 523.5 571 49.0
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 8.0e-145 518.1 471 56.3
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.0e-144 517.7 376 67.3
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 1.4e-144 517.3 548 48.4
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 3.9e-144 515.8 513 52.8
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 7.4e-143 511.5 405 62.7
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.2e-140 504.2 440 59.8
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 1.1e-133 481.1 375 62.9
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 1.4e-133 480.7 425 57.2
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 2.5e-130 469.9 365 64.7
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 8.8e-128 461.5 385 61.0
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 5.9e-124 448.7 529 46.5
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 1.9e-122 443.7 365 60.8
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 2.7e-108 396.7 512 44.7
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 8.3e-102 375.2 242 73.6
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 6.0e-92 342.4 255 67.8
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 7.6e-79 298.9 511 37.8
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 5.4e-77 292.7 418 43.5
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 2.7e-76 290.4 238 61.3
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 5.4e-69 266.2 261 54.4
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 2.5e-61 240.7 144 78.5
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 2.7e-60 237.3 137 78.8
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 5.1e-59 233.0 587 31.0
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 5.1e-51 206.5 335 37.0
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 9.7e-50 202.2 149 65.1
Nn1g07675 Nelumbo nucifera HOM05D002451 ORTHO05D007901 2.0e-47 194.5 113 82.3
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 6.5e-46 189.5 153 62.7
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 1.5e-39 168.3 124 61.3
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 6.5e-38 162.9 139 64.7
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 2.5e-37 161.0 89 84.3
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 9.4e-37 159.1 91 82.4
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 6.1e-36 156.4 94 78.7
Ciclev10010851m.g Citrus clementina HOM05D002451 ORTHO05D007901 1.8e-27 128.3 76 80.3
CBR_g41538 Chara braunii HOM05D002451 ORTHO05D007901 1.8e-19 101.7 121 47.1
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 6.3e-17 93.2 52 75.0
TPR.G23499 Trifolium pratense HOM05D002451 ORTHO05D007901 5.4e-16 90.1 51 74.5
COL.COLO4_28348 Corchorus olitorius HOM05D002451 ORTHO05D007901 8.6e-06 56.2 39 61.5


User provided reference genes

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