Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015295001 Vitis vinifera HOM05D008202 ORTHO05D010302 2.2e-48 195.3 96 100.0
Dinv42250 Davidia involucrata HOM05D008202 ORTHO05D010302 2.7e-22 108.6 96 61.5
CSS0001567 Camellia sinensis var. sinensis HOM05D008202 ORTHO05D010302 2.3e-21 105.5 97 56.7
Hma1.2p1_0386F.1_g141760 Hydrangea macrophylla HOM05D008202 ORTHO05D010302 2.5e-20 102.1 96 56.2
Actinidia17520 Actinidia chinensis HOM05D008202 ORTHO05D010302 1.6e-19 99.4 96 56.2
Thecc.09G099700 Theobroma cacao HOM05D008202 ORTHO05D010302 2.8e-19 98.6 94 54.3
Lsat_1_v5_gn_8_98261 Lactuca sativa HOM05D008202 ORTHO05D010302 4.7e-19 97.8 94 58.5
HanXRQChr12g0358111 Helianthus annuus HOM05D008202 ORTHO05D010302 1.4e-18 96.3 96 51.0
Manes.03G026600 Manihot esculenta HOM05D008202 ORTHO05D010302 2.3e-18 95.5 93 57.0
Manes.04G125801 Manihot esculenta HOM05D008202 ORTHO05D010302 8.9e-18 93.6 82 62.2
Manes.13G078801 Manihot esculenta HOM05D008202 ORTHO05D010302 8.9e-18 93.6 82 62.2
TWI63G1052 Tripterygium wilfordii HOM05D008202 ORTHO05D010302 1.5e-17 92.8 94 54.3
CiPaw.04G155900 Carya illinoinensis HOM05D008202 ORTHO05D010302 2.0e-17 92.4 93 52.7
EL10Ac8g18376 Beta vulgaris HOM05D008202 ORTHO05D010302 5.8e-17 90.9 96 52.1
Rhsim05G0039400 Rhododendron simsii HOM05D008202 ORTHO05D010302 5.8e-17 90.9 99 48.5
Dinv36682 Davidia involucrata HOM05D008202 ORTHO05D010302 7.6e-17 90.5 96 52.1
CiPaw.04G157000 Carya illinoinensis HOM05D008202 ORTHO05D010302 9.9e-17 90.1 93 52.7
Haze_25829 Corylus avellana HOM05D008202 ORTHO05D010302 1.3e-16 89.7 96 50.0
AUR62021399 Chenopodium quinoa HOM05D008202 ORTHO05D010302 1.7e-16 89.4 96 55.2
Cc06_g10540 Coffea canephora HOM05D008202 ORTHO05D010302 3.7e-16 88.2 96 52.1
Actinidia39781 Actinidia chinensis HOM05D008202 ORTHO05D010302 6.4e-16 87.4 93 52.7
Sc18g0001520 Simmondsia chinensis HOM05D008202 ORTHO05D010302 1.1e-15 86.7 96 49.0
AUR62010887 Chenopodium quinoa HOM05D008202 ORTHO05D010302 1.4e-15 86.3 96 53.1
Oeu018577.1 Olea europaea HOM05D008202 ORTHO05D010302 1.4e-15 86.3 91 49.5
MSTRG.19550 Avicennia marina HOM05D008202 ORTHO05D010302 5.4e-15 84.3 78 55.1
Gohir.A06G067500 Gossypium hirsutum HOM05D008202 ORTHO05D010302 5.4e-15 84.3 93 51.6
Ah.14g083220 Amaranthus hybridus HOM05D008202 ORTHO05D010302 7.1e-15 84.0 96 49.0
Ciclev10010342m.g Citrus clementina HOM05D008202 ORTHO05D010302 1.2e-14 83.2 78 61.5
Gorai.010G077500 Gossypium raimondii HOM05D008202 ORTHO05D010302 1.2e-14 83.2 95 50.5
DCAR_028656 Daucus carota HOM05D008202 ORTHO05D010302 1.6e-14 82.8 96 53.1
Nn8g39054 Nelumbo nucifera HOM05D008202 ORTHO05D010302 2.1e-14 82.4 98 48.0
vmacro10849 Vaccinium macrocarpon HOM05D008202 ORTHO05D010302 3.5e-14 81.6 80 53.8
Ah.14g082540 Amaranthus hybridus HOM05D008202 ORTHO05D010302 4.6e-14 81.3 45 77.8
Ciclev10027258m.g Citrus clementina HOM05D008202 ORTHO05D010302 1.3e-13 79.7 70 61.4
Medtr6g088800 Medicago truncatula HOM05D008202 ORTHO05D010302 8.6e-13 77.0 92 42.4
COL.COLO4_34733 Corchorus olitorius HOM05D008202 ORTHO05D010302 1.5e-12 76.3 57 57.9
MD02G1066600 Malus domestica HOM05D008202 ORTHO05D010302 1.9e-12 75.9 73 52.1
Gohir.D06G066100 Gossypium hirsutum HOM05D008202 ORTHO05D010302 3.3e-12 75.1 93 46.2
Migut.K00545 Erythranthe guttata HOM05D008202 ORTHO05D010302 4.3e-12 74.7 75 52.0
Prupe.7G218700 Prunus persica HOM05D008202 ORTHO05D010302 9.6e-12 73.6 76 47.4
SGA_v2.0_scaffold512G52633 Striga asiatica HOM05D008202 ORTHO05D010302 9.6e-12 73.6 46 67.4
CDE08G1102 Ceratophyllum demersum HOM05D008202 ORTHO05D010302 1.6e-11 72.8 89 47.2
Ciclev10027039m.g Citrus clementina HOM05D008202 ORTHO05D010302 3.6e-11 71.6 96 49.0
Peaxi162Scf00720g00418 Petunia axillaris HOM05D008202 ORTHO05D010302 3.6e-11 71.6 52 65.4
PGSC0003DMG400046448 Solanum tuberosum HOM05D001685 ORTHO05D006653 1.1e-10 70.1 54 63.0
Solyc04g058130.3 Solanum lycopersicum HOM05D008202 ORTHO05D010302 1.4e-10 69.7 54 63.0
Atru.chr7.1471 Acer truncatum HOM05D008202 ORTHO05D010302 4.0e-10 68.2 90 44.4
CsaV3_2G001850 Cucumis sativus L. HOM05D008202 ORTHO05D010302 4.0e-10 68.2 78 47.4
ClCG11G002070 Citrullus lanatus HOM05D008202 ORTHO05D010302 6.8e-10 67.4 74 50.0
Eucgr.C03726 Eucalyptus grandis HOM05D008202 ORTHO05D010302 2.0e-09 65.9 80 45.0
FAN26G0167 Fragaria x ananassa HOM05D008202 ORTHO05D010302 2.0e-09 65.9 59 57.6
FAN26G3206 Fragaria x ananassa HOM05D008202 ORTHO05D010302 2.0e-09 65.9 59 57.6
HPP92_009087 Vanilla planifolia HOM05D008202 ORTHO05D010302 2.0e-09 65.9 54 51.9
RcHm_v2.0_Chr2g0091981 Rosa chinensis HOM05D008202 ORTHO05D010302 3.4e-09 65.1 42 73.8
Lalb_Chr14g0371911 Lupinus albus HOM05D008202 ORTHO05D010302 4.4e-09 64.7 91 36.3
Psat1g048280 Pisum sativum HOM05D008202 ORTHO05D010302 4.4e-09 64.7 100 41.0
FAN23G0175 Fragaria x ananassa HOM05D008202 ORTHO05D010302 5.8e-09 64.3 91 46.2
FvH4_1g06280 Fragaria vesca HOM05D008202 ORTHO05D010302 7.6e-09 63.9 91 47.3
FAN19G1093 Fragaria x ananassa HOM05D008202 ORTHO05D010302 7.6e-09 63.9 91 47.3
ATR0705G156 Amborella trichopoda HOM05D008202 ORTHO05D010302 1.3e-08 63.2 42 64.3
MBI01_g10122_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 1.3e-08 63.2 80 37.5
PSO210G1322 Papaver somniferum HOM05D061259 ORTHO05D010302 4.2e-07 58.2 38 60.5
Nitab4.5_0002557g0010 Nicotiana tabacum HOM05D001685 ORTHO05D006653 5.4e-07 57.8 39 59.0
PSO210G2383 Papaver somniferum HOM05D061259 ORTHO05D010302 5.4e-07 57.8 38 60.5
Os01g0742766 Oryza sativa ssp. japonica HOM05D008202 ORTHO05D010302 7.1e-07 57.4 40 55.0
unitig_52.g17250 Utricularia gibba HOM05D008202 ORTHO05D010302 7.1e-07 57.4 60 38.3
unitig_52.g17095 Utricularia gibba HOM05D008202 ORTHO05D010302 9.3e-07 57.0 60 38.3
MD15G1197100 Malus domestica HOM05D008202 ORTHO05D010302 1.2e-06 56.6 86 34.9
Zm00001eb371180 Zea mays HOM05D008202 ORTHO05D010302 1.2e-06 56.6 40 55.0


User provided reference genes

Program Settings