Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 4.1e-116 421.4 211 100.0
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 1.3e-98 363.2 212 84.9
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 3.0e-98 362.1 217 83.4
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 9.5e-97 357.1 210 83.3
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.6e-96 356.3 210 85.2
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 2.8e-96 355.5 204 87.3
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 2.8e-96 355.5 210 84.3
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 6.2e-96 354.4 210 84.3
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.8e-95 352.8 210 83.8
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 2.3e-95 352.4 211 83.4
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 4.4e-94 348.2 210 81.9
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 1.3e-93 346.7 207 82.1
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 2.2e-93 345.9 211 82.0
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.4e-92 342.4 211 81.0
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 4.1e-92 341.7 193 88.6
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 6.0e-91 337.8 212 79.2
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 3.0e-90 335.5 202 81.7
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.9e-90 335.1 195 84.1
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 5.1e-90 334.7 196 83.2
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 6.6e-90 334.3 194 85.1
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 1.1e-89 333.6 196 84.2
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 2.5e-89 332.4 198 81.8
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 2.5e-89 332.4 203 80.3
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 2.5e-89 332.4 203 80.8
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 3.3e-89 332.0 209 77.5
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 4.3e-89 331.6 212 78.3
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 5.6e-89 331.3 196 81.6
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 5.6e-89 331.3 196 81.6
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 5.6e-89 331.3 204 79.4
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 5.6e-89 331.3 203 80.8
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 9.5e-89 330.5 198 81.3
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 9.5e-89 330.5 198 81.8
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 2.1e-88 329.3 202 79.7
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 4.7e-88 328.2 196 83.7
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 4.7e-88 328.2 211 77.3
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 4.7e-88 328.2 211 77.3
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 8.1e-88 327.4 197 82.7
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 1.4e-87 326.6 203 80.8
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.8e-87 326.2 196 82.7
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 3.1e-87 325.5 193 80.8
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 3.1e-87 325.5 197 80.2
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 3.1e-87 325.5 194 83.0
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 4.0e-87 325.1 222 75.2
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 4.0e-87 325.1 222 75.2
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 6.8e-87 324.3 195 81.0
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 6.8e-87 324.3 198 78.8
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 1.5e-86 323.2 194 80.9
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.0e-86 322.8 202 79.7
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 2.0e-86 322.8 194 80.4
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 2.6e-86 322.4 196 79.6
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 3.4e-86 322.0 195 80.0
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 3.4e-86 322.0 201 78.1
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 4.4e-86 321.6 194 79.4
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 7.6e-86 320.9 198 78.3
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 9.9e-86 320.5 195 79.0
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 9.9e-86 320.5 203 78.3
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 9.9e-86 320.5 192 81.2
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 9.9e-86 320.5 213 76.1
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 1.3e-85 320.1 195 80.0
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 1.3e-85 320.1 195 80.0
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 2.2e-85 319.3 195 79.5
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 2.2e-85 319.3 209 72.7
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 2.2e-85 319.3 209 72.7
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.9e-85 318.9 210 77.1
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.9e-85 318.9 210 77.1
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 3.7e-85 318.5 198 77.8
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 4.9e-85 318.2 192 80.2
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 8.3e-85 317.4 195 79.0
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 8.3e-85 317.4 195 79.0
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 1.1e-84 317.0 196 78.6
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 1.4e-84 316.6 195 78.5
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 1.9e-84 316.2 208 79.3
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 4.1e-84 315.1 195 77.9
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 4.1e-84 315.1 198 76.8
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 1.2e-83 313.5 193 79.3
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 1.6e-83 313.2 192 81.2
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 2.7e-83 312.4 193 78.8
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 6.0e-83 311.2 182 85.2
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 7.8e-83 310.8 224 71.0
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.0e-82 310.5 195 76.9
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.0e-82 310.5 211 71.6
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 2.5e-81 305.8 221 70.6
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 2.5e-81 305.8 210 74.8
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 3.3e-81 305.4 183 80.3
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 3.6e-80 302.0 192 77.1
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 1.5e-78 296.6 192 76.0
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 4.4e-78 295.0 196 78.6
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 6.0e-75 284.6 203 72.4
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 1.6e-72 276.6 182 77.5
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 2.8e-72 275.8 225 65.3
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 2.0e-70 269.6 192 68.8
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 2.0e-70 269.6 192 68.8
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 1.7e-69 266.5 199 67.8
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 9.3e-68 260.8 192 67.2
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.1e-67 259.6 155 84.5
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 3.9e-66 255.4 192 66.7
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 1.5e-65 253.4 208 66.3
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 4.3e-65 251.9 158 79.7
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.8e-64 249.2 202 67.8
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 4.8e-64 248.4 141 86.5
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 2.4e-63 246.1 188 70.7
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 2.2e-61 239.6 158 76.6
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.3e-58 230.3 139 84.9
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 5.5e-52 208.4 183 63.4
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 6.0e-51 204.9 135 80.7
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 9.6e-49 197.6 124 82.3
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 3.8e-45 185.7 120 78.3
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 6.5e-45 184.9 138 68.8
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 3.1e-39 166.0 98 80.6
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 4.5e-38 162.2 108 76.9
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.1e-33 147.5 88 76.1
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 2.4e-31 139.8 122 64.8
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 3.8e-29 132.5 100 68.0
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 6.1e-27 125.2 193 36.3
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 8.8e-26 121.3 183 37.2
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 2.6e-25 119.8 182 37.4
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 2.8e-24 116.3 101 62.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 4.8e-24 115.5 101 61.4
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.9e-20 103.6 59 79.7
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 2.1e-19 100.1 124 52.4
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 1.1e-17 94.4 90 48.9
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 1.8e-15 87.0 67 67.2
Hma1.2p1_0663F.1_g198600 Hydrangea macrophylla HOM05D006447 ORTHO05D007938 2.7e-06 56.6 50 64.0


User provided reference genes

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