Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015262001 Vitis vinifera HOM05D001384 ORTHO05D001215 1.9e-19 98.6 66 100.0
CSS0002673 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 1.9e-11 72.0 69 79.7
CSS0049312 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 1.9e-11 72.0 69 79.7
CSS0028432 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 2.1e-10 68.6 68 76.5
Thecc.09G095500 Theobroma cacao HOM05D001384 ORTHO05D001215 6.1e-10 67.0 66 63.6
MBI01_g10310_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 3.1e-09 64.7 66 71.2
Lj2g0025499 Lotus japonicus HOM05D001384 ORTHO05D001215 6.8e-09 63.5 66 66.7
Haze_25860 Corylus avellana HOM05D001384 ORTHO05D001215 8.9e-09 63.2 73 68.5
MD02G1072000 Malus domestica HOM05D001384 ORTHO05D001215 1.2e-08 62.8 66 60.6
CiPaw.03G220500 Carya illinoinensis HOM05D001384 ORTHO05D001215 1.5e-08 62.4 66 62.1
Prupe.7G215700 Prunus persica HOM05D001384 ORTHO05D001215 1.5e-08 62.4 66 57.6
Phvul.004G173101 Phaseolus vulgaris HOM05D001384 ORTHO05D001215 2.0e-08 62.0 66 56.1
TAR626G0551 Trochodendron aralioides HOM05D001384 ORTHO05D001215 3.4e-08 61.2 66 60.6
FvH4_1g06710 Fragaria vesca HOM05D001384 ORTHO05D001215 4.4e-08 60.8 66 57.6
MD15G1201800 Malus domestica HOM05D001384 ORTHO05D001215 1.3e-07 59.3 66 57.6
Glyma.07G127200 Glycine max HOM05D001384 ORTHO05D001215 2.9e-07 58.2 66 56.1
Lalb_Chr24g0393961 Lupinus albus HOM05D001384 ORTHO05D001215 3.7e-07 57.8 66 56.1
Nitab4.5_0000540g0040 Nicotiana tabacum HOM05D001384 ORTHO05D001215 3.7e-07 57.8 66 60.6
Migut.J01071 Erythranthe guttata HOM05D001384 ORTHO05D001215 4.9e-07 57.4 66 62.1
Glyma.01G004600 Glycine max HOM05D001384 ORTHO05D001215 4.9e-07 57.4 67 59.7
Peaxi162Scf00498g00030 Petunia axillaris HOM05D001384 ORTHO05D001215 4.9e-07 57.4 66 59.1
DCAR_012014 Daucus carota HOM05D001384 ORTHO05D001215 6.4e-07 57.0 66 68.2
RcHm_v2.0_Chr2g0092451 Rosa chinensis HOM05D001384 ORTHO05D001215 8.3e-07 56.6 67 55.2
Cc06_g10880 Coffea canephora HOM05D001384 ORTHO05D001215 1.1e-06 56.2 66 65.2
Psat1g048920 Pisum sativum HOM05D001384 ORTHO05D001215 1.1e-06 56.2 66 62.1
COL.COLO4_18260 Corchorus olitorius HOM05D001384 ORTHO05D001215 1.4e-06 55.8 57 63.2
FAN23G2194 Fragaria x ananassa HOM05D001384 ORTHO05D001215 1.4e-06 55.8 66 53.0
DCAR_010686 Daucus carota HOM05D001384 ORTHO05D001215 1.9e-06 55.5 66 65.2
FAN28G1521 Fragaria x ananassa HOM05D001384 ORTHO05D001215 3.2e-06 54.7 66 53.0
Lj4g0006841 Lotus japonicus HOM05D001384 ORTHO05D001215 3.2e-06 54.7 57 61.4
Actinidia27339 Actinidia chinensis HOM05D001384 ORTHO05D001215 5.4e-06 53.9 65 52.3
Aqoxy5G04117 Aquilegia oxysepala HOM05D001384 ORTHO05D001215 5.4e-06 53.9 65 63.1
Migut.K00567 Erythranthe guttata HOM05D001384 ORTHO05D001215 5.4e-06 53.9 66 63.6
Hma1.2p1_0384F.1_g141070 Hydrangea macrophylla HOM05D001384 ORTHO05D001215 5.4e-06 53.9 65 47.7
HanXRQChr10g0319041 Helianthus annuus HOM05D001384 ORTHO05D001215 7.0e-06 53.5 66 56.1
arahy.Tifrunner.gnm1.ann1.T3QZI5 Arachis hypogaea HOM05D001384 ORTHO05D001215 9.2e-06 53.1 59 62.7
Gohir.D06G068500 Gossypium hirsutum HOM05D001384 ORTHO05D001215 9.2e-06 53.1 66 54.5
Phvul.002G162600 Phaseolus vulgaris HOM05D001384 ORTHO05D001215 9.2e-06 53.1 68 48.5


User provided reference genes

Program Settings