Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015259001 Vitis vinifera HOM05D000433 ORTHO05D015038 7.3e-40 166.8 85 100.0
GSVIVG01035633001 Vitis vinifera HOM05D000433 ORTHO05D003991 1.3e-28 129.4 68 94.1
GSVIVG01035636001 Vitis vinifera HOM05D000433 ORTHO05D003991 5.8e-21 104.0 66 72.7
TAR383G0708 Trochodendron aralioides HOM05D000433 ORTHO05D003991 2.5e-19 98.6 68 67.6
TAR383G1023 Trochodendron aralioides HOM05D000433 ORTHO05D003991 9.3e-19 96.7 66 68.2
GSVIVG01035632001 Vitis vinifera HOM05D000433 ORTHO05D003991 2.1e-18 95.5 77 62.3
Potri.018G042650 Populus trichocarpa HOM05D000433 ORTHO05D003991 6.0e-18 94.0 68 64.7
Prupe.1G449300 Prunus persica HOM05D000433 ORTHO05D003991 5.1e-17 90.9 64 65.6
Dinv27895 Davidia involucrata HOM05D000433 ORTHO05D003991 6.7e-17 90.5 65 61.5
MD15G1094300 Malus domestica HOM05D000433 ORTHO05D003991 1.5e-16 89.4 65 58.5
CSS0012936 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 2.5e-16 88.6 68 64.7
FvH4_2g35680 Fragaria vesca HOM05D000433 ORTHO05D003991 2.5e-16 88.6 64 64.1
FAN15G3649 Fragaria x ananassa HOM05D000433 ORTHO05D003991 2.5e-16 88.6 64 64.1
Manes.03G057750 Manihot esculenta HOM05D000433 ORTHO05D003991 2.5e-16 88.6 68 58.8
TPR.G1382 Trifolium pratense HOM05D000433 ORTHO05D003991 3.3e-16 88.2 68 54.4
FvH4_2g35681 Fragaria vesca HOM05D000433 ORTHO05D003991 7.4e-16 87.0 64 62.5
Atru.chr7.2097 Acer truncatum HOM05D000433 ORTHO05D003991 1.6e-15 85.9 65 61.5
Prupe.1G449200 Prunus persica HOM05D000433 ORTHO05D003991 1.6e-15 85.9 62 62.9
CSS0016926 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 2.2e-15 85.5 68 58.8
Medtr3g110195 Medicago truncatula HOM05D000433 ORTHO05D003991 2.8e-15 85.1 68 55.9
CSS0015925 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 3.7e-15 84.7 68 58.8
Hma1.2p1_0774F.1_g216310 Hydrangea macrophylla HOM05D000433 ORTHO05D015038 3.7e-15 84.7 74 52.7
Atru.chr7.2110 Acer truncatum HOM05D000433 ORTHO05D003991 4.8e-15 84.3 65 61.5
Sopen08g020690 Solanum pennellii HOM05D000433 ORTHO05D003991 6.3e-15 84.0 66 62.1
TPR.G1375 Trifolium pratense HOM05D000433 ORTHO05D003991 8.2e-15 83.6 68 52.9
Eucgr.C00545 Eucalyptus grandis HOM05D000433 ORTHO05D003991 1.1e-14 83.2 57 70.2
CSS0045124 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 1.4e-14 82.8 68 58.8
Lj7C703T4 Lonicera japonica HOM05D000433 ORTHO05D003991 1.4e-14 82.8 65 61.5
Dinv14256 Davidia involucrata HOM05D000433 ORTHO05D003991 1.8e-14 82.4 55 69.1
Peaxi162Scf00323g00925 Petunia axillaris HOM05D000433 ORTHO05D003991 1.8e-14 82.4 62 64.5
Potri.006G239402 Populus trichocarpa HOM05D000433 ORTHO05D003991 2.4e-14 82.0 69 59.4
Thecc.09G043800 Theobroma cacao HOM05D000433 ORTHO05D003991 3.1e-14 81.6 67 58.2
PSO210G3307 Papaver somniferum HOM05D000433 ORTHO05D003991 4.1e-14 81.3 68 51.5
Peaxi162Scf00227g00007 Petunia axillaris HOM05D000433 ORTHO05D003991 4.1e-14 81.3 67 64.2
Peaxi162Scf00323g00934 Petunia axillaris HOM05D000433 ORTHO05D003991 4.1e-14 81.3 62 66.1
Atru.chr7.2096 Acer truncatum HOM05D000433 ORTHO05D003991 6.9e-14 80.5 68 54.4
Manes.16G076200 Manihot esculenta HOM05D000433 ORTHO05D003991 6.9e-14 80.5 61 62.3
Potri.018G043500 Populus trichocarpa HOM05D000433 ORTHO05D003991 6.9e-14 80.5 74 47.3
Duzib168G1402 Durio zibethinus HOM05D000433 ORTHO05D003991 9.0e-14 80.1 67 55.2
Manes.03G057900 Manihot esculenta HOM05D000433 ORTHO05D003991 9.0e-14 80.1 69 58.0
FAN18G1489 Fragaria x ananassa HOM05D000433 ORTHO05D003991 1.2e-13 79.7 64 59.4
Oeu057713.1 Olea europaea HOM05D000433 ORTHO05D003991 1.2e-13 79.7 74 52.7
Phvul.009G109200 Phaseolus vulgaris HOM05D000433 ORTHO05D003991 1.2e-13 79.7 67 53.7
Solyc11g071227.1 Solanum lycopersicum HOM05D000433 ORTHO05D003991 1.2e-13 79.7 62 61.3
VMungo1309G2807 Vigna mungo HOM05D000433 ORTHO05D003991 1.2e-13 79.7 62 58.1
CAN.G309.89 Capsicum annuum HOM05D000433 ORTHO05D003991 1.5e-13 79.3 62 62.9
CAN.G335.8 Capsicum annuum HOM05D000433 ORTHO05D003991 1.5e-13 79.3 66 56.1
FAN13G2375 Fragaria x ananassa HOM05D000433 ORTHO05D003991 1.5e-13 79.3 64 57.8
Hma1.2p1_0049F.1_g028700 Hydrangea macrophylla HOM05D000433 ORTHO05D003991 1.5e-13 79.3 55 69.1
Cc08_g09420 Coffea canephora HOM05D000433 ORTHO05D003991 2.0e-13 79.0 79 50.6
Oeu036367.1 Olea europaea HOM05D000433 ORTHO05D003991 2.0e-13 79.0 74 54.1
Potri.006G239200 Populus trichocarpa HOM05D000433 ORTHO05D003991 2.6e-13 78.6 74 48.6
CAN.G792.2 Capsicum annuum HOM05D000433 ORTHO05D003991 3.4e-13 78.2 62 58.1
COL.COLO4_18651 Corchorus olitorius HOM05D000433 ORTHO05D003991 3.4e-13 78.2 73 50.7
DCAR_003121 Daucus carota HOM05D000433 ORTHO05D003991 3.4e-13 78.2 67 55.2
Cpa.g.sc7.267 Carica papaya HOM05D000433 ORTHO05D003991 4.5e-13 77.8 74 51.4
Dinv14257 Davidia involucrata HOM05D000433 ORTHO05D003991 4.5e-13 77.8 75 52.0
Dinv14259 Davidia involucrata HOM05D000433 ORTHO05D003991 4.5e-13 77.8 75 49.3
Glyma.06G085100 Glycine max HOM05D000433 ORTHO05D003991 4.5e-13 77.8 62 58.1
MBI04_g27076_MAGBIO Magnolia biondii HOM05D000433 ORTHO05D003991 5.9e-13 77.4 62 56.5
PGSC0003DMG400004311 Solanum tuberosum HOM05D000433 ORTHO05D003991 5.9e-13 77.4 66 54.5
Glyma.04G083650 Glycine max HOM05D000433 ORTHO05D015038 7.7e-13 77.0 62 58.1
FvH4_5g00520 Fragaria vesca HOM05D000433 ORTHO05D003991 1.0e-12 76.6 57 64.9
Psat5g021960 Pisum sativum HOM05D000433 ORTHO05D003991 1.0e-12 76.6 68 51.5
Migut.A00213 Erythranthe guttata HOM05D000433 ORTHO05D003991 1.3e-12 76.3 62 62.9
Cc08_g09430 Coffea canephora HOM05D000433 ORTHO05D003991 1.7e-12 75.9 73 53.4
Lj1g0021560 Lotus japonicus HOM05D000433 ORTHO05D003991 1.7e-12 75.9 68 48.5
Prupe.1G449100 Prunus persica HOM05D000433 ORTHO05D003991 1.7e-12 75.9 85 49.4
Ciclev10010551m.g Citrus clementina HOM05D000433 ORTHO05D003991 2.2e-12 75.5 68 51.5
Migut.E01520 Erythranthe guttata HOM05D000433 ORTHO05D003991 2.2e-12 75.5 59 64.4
Migut.E01525 Erythranthe guttata HOM05D000433 ORTHO05D003991 2.2e-12 75.5 59 64.4
Eucgr.C02920 Eucalyptus grandis HOM05D000433 ORTHO05D003991 2.2e-12 75.5 64 50.0
FAN20G2606 Fragaria x ananassa HOM05D000433 ORTHO05D003991 2.2e-12 75.5 63 57.1
Lsat_1_v5_gn_3_26320 Lactuca sativa HOM05D000433 ORTHO05D003991 2.2e-12 75.5 80 47.5
CANSAT25G0153 Cannabis sativa HOM05D000433 ORTHO05D003991 2.9e-12 75.1 62 61.3
Psat5g021920 Pisum sativum HOM05D000433 ORTHO05D003991 3.8e-12 74.7 68 51.5
QL12p029096 Quercus lobata HOM05D000433 ORTHO05D003991 5.0e-12 74.3 62 56.5
arahy.Tifrunner.gnm1.ann1.I9LXD5 Arachis hypogaea HOM05D000433 ORTHO05D003991 8.5e-12 73.6 68 51.5
FvH4_2g35670 Fragaria vesca HOM05D000433 ORTHO05D003991 8.5e-12 73.6 63 55.6
ATR0705G175 Amborella trichopoda HOM05D000433 ORTHO05D003991 1.1e-11 73.2 74 45.9
Gorai.010G107700 Gossypium raimondii HOM05D000433 ORTHO05D003991 1.1e-11 73.2 74 51.4
Sabra18G0043100 Salix brachista HOM05D000433 ORTHO05D003991 1.1e-11 73.2 74 44.6
Gohir.D06G093300 Gossypium hirsutum HOM05D000433 ORTHO05D003991 1.4e-11 72.8 68 54.4
Actinidia30273 Actinidia chinensis HOM05D000433 ORTHO05D003991 1.9e-11 72.4 68 52.9
Haze_21881 Corylus avellana HOM05D000433 ORTHO05D003991 1.9e-11 72.4 75 45.3
CsaV3_3G048570 Cucumis sativus L. HOM05D000433 ORTHO05D003991 1.9e-11 72.4 67 52.2
Sabra06G0187000 Salix brachista HOM05D000433 ORTHO05D003991 1.9e-11 72.4 74 44.6
Potri.006G239300 Populus trichocarpa HOM05D000433 ORTHO05D003991 2.5e-11 72.0 74 45.9
Sabra18G0043500 Salix brachista HOM05D000433 ORTHO05D003991 2.5e-11 72.0 74 43.2
Glyma.04G083500 Glycine max HOM05D000433 ORTHO05D003991 3.2e-11 71.6 68 51.5
Sabra18G0043600 Salix brachista HOM05D000433 ORTHO05D003991 3.2e-11 71.6 74 43.2
Gohir.1Z049422 Gossypium hirsutum HOM05D000433 ORTHO05D003991 4.2e-11 71.2 66 56.1
Gohir.A06G093600 Gossypium hirsutum HOM05D000433 ORTHO05D003991 4.2e-11 71.2 66 56.1
Solyc11g071223.1 Solanum lycopersicum HOM05D000433 ORTHO05D015038 4.2e-11 71.2 63 57.1
DCAR_003120 Daucus carota HOM05D000433 ORTHO05D003991 5.5e-11 70.9 83 44.6
Cfa001732 Carpinus fangiana HOM05D000433 ORTHO05D003991 9.4e-11 70.1 69 47.8
Gohir.A05G047200 Gossypium hirsutum HOM05D000433 ORTHO05D003991 9.4e-11 70.1 65 56.9
PGR044G1800 Punica granatum HOM05D000433 ORTHO05D003991 9.4e-11 70.1 67 52.2
MELO3C003462.2 Cucumis melo HOM05D000433 ORTHO05D003991 1.2e-10 69.7 67 50.7
Os09g0321200 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 1.2e-10 69.7 68 51.5
ECA246G2703 Erigeron canadensis HOM05D000433 ORTHO05D003991 1.6e-10 69.3 66 50.0
MD08G1115000 Malus domestica HOM05D000433 ORTHO05D003991 1.6e-10 69.3 68 51.5
ECA246G4238 Erigeron canadensis HOM05D000433 ORTHO05D003991 2.1e-10 68.9 75 50.7
TPR.G10772 Trifolium pratense HOM05D000433 ORTHO05D015038 2.1e-10 68.9 50 58.0
Glyma.06G085000 Glycine max HOM05D000433 ORTHO05D003991 2.7e-10 68.6 68 50.0
TWI34G0034 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 2.7e-10 68.6 70 51.4
Gorai.009G050300 Gossypium raimondii HOM05D000433 ORTHO05D003991 3.6e-10 68.2 63 57.1
Phvul.009G109100 Phaseolus vulgaris HOM05D000433 ORTHO05D003991 6.1e-10 67.4 68 47.1
RcHm_v2.0_Chr6g0306131 Rosa chinensis HOM05D000433 ORTHO05D003991 6.1e-10 67.4 68 52.9
Sed0013565 Sechium edule HOM05D000433 ORTHO05D003991 6.1e-10 67.4 71 45.1
PGSC0003DMG400004312 Solanum tuberosum HOM05D000433 ORTHO05D003991 7.9e-10 67.0 66 48.5
ECA246G0302 Erigeron canadensis HOM05D000433 ORTHO05D003991 1.4e-09 66.2 66 48.5
HanXRQChr17g0538671 Helianthus annuus HOM05D000433 ORTHO05D003991 2.3e-09 65.5 45 64.4
Os08g0369800 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 2.3e-09 65.5 62 46.8
Lj1g0020723 Lotus japonicus HOM05D000433 ORTHO05D003991 3.0e-09 65.1 71 46.5
Lj1g0023259 Lotus japonicus HOM05D000433 ORTHO05D003991 3.0e-09 65.1 71 46.5
TWI34G1621 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 3.0e-09 65.1 70 50.0
Cpa.g.sc522.4 Carica papaya HOM05D000433 ORTHO05D003991 5.1e-09 64.3 66 50.0
Lsat_1_v5_gn_6_24381 Lactuca sativa HOM05D000433 ORTHO05D003991 5.1e-09 64.3 57 52.6
TWI34G1265 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 5.1e-09 64.3 70 47.1
Gohir.D05G049100 Gossypium hirsutum HOM05D000433 ORTHO05D003991 6.7e-09 63.9 65 52.3
TWI34G0984 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 6.7e-09 63.9 70 45.7
Eucgr.C02921 Eucalyptus grandis HOM05D000433 ORTHO05D003991 8.8e-09 63.5 66 50.0
Os08g0371200 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D015038 8.8e-09 63.5 55 52.7
VMungo1309G0333 Vigna mungo HOM05D000433 ORTHO05D015038 8.8e-09 63.5 67 44.8
ECA233G3103 Erigeron canadensis HOM05D000433 ORTHO05D003991 1.5e-08 62.8 69 47.8
HanXRQChr13g0401881 Helianthus annuus HOM05D000433 ORTHO05D003991 1.5e-08 62.8 57 50.9
Lsat_1_v5_gn_3_26280 Lactuca sativa HOM05D000433 ORTHO05D003991 1.5e-08 62.8 66 43.9
Sopen11g028910 Solanum pennellii HOM05D000433 ORTHO05D003991 1.5e-08 62.8 49 61.2
FAN08G0103 Fragaria x ananassa HOM05D000433 ORTHO05D003991 1.3e-07 59.7 64 48.4
HPP92_006323 Vanilla planifolia HOM05D000433 ORTHO05D003991 4.8e-07 57.8 65 47.7
Sabra18G0043000 Salix brachista HOM05D000433 ORTHO05D003991 6.3e-07 57.4 69 44.9
Os08g0371608 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 3.1e-06 55.1 53 50.9
Os06g0162550 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 4.1e-06 54.7 62 41.9


User provided reference genes

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