Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 0.0e+00 1961.0 1092 100.0
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 0.0e+00 1664.4 1094 79.4
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 0.0e+00 1637.1 1094 79.0
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 0.0e+00 1630.9 1083 81.3
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1627.1 1096 80.9
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1614.0 1094 77.2
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 0.0e+00 1602.8 1095 79.5
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1597.8 1090 81.1
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1597.0 1106 80.2
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 0.0e+00 1597.0 1096 81.7
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1593.6 1114 75.3
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 0.0e+00 1587.0 1092 79.5
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 0.0e+00 1586.6 1095 77.4
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1580.8 1091 80.6
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 0.0e+00 1579.7 1101 78.7
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1578.5 1096 78.3
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 0.0e+00 1578.1 1096 79.1
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 0.0e+00 1575.5 1090 79.4
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1574.3 1124 79.7
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 0.0e+00 1571.2 1092 78.7
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 0.0e+00 1565.4 1092 79.1
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 0.0e+00 1562.7 1061 78.1
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 0.0e+00 1561.6 1095 77.8
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1560.0 1093 78.9
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1553.9 1092 78.9
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 0.0e+00 1552.0 1069 77.6
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 0.0e+00 1551.2 1095 75.8
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 0.0e+00 1550.0 1078 76.7
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 0.0e+00 1547.7 1091 77.2
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 0.0e+00 1545.8 1100 74.9
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 0.0e+00 1545.0 1095 77.8
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 0.0e+00 1543.9 1069 77.6
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 0.0e+00 1541.6 1090 76.3
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1539.2 1095 75.7
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1539.2 1095 75.7
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1536.5 1096 76.6
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1531.2 1124 78.4
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 0.0e+00 1531.2 1069 76.8
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1530.8 1094 74.5
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 0.0e+00 1530.4 1200 73.9
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1528.5 1095 76.4
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 0.0e+00 1527.3 1095 75.2
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 0.0e+00 1526.9 1057 76.5
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 0.0e+00 1522.7 1096 76.9
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 0.0e+00 1522.3 1077 75.2
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 0.0e+00 1520.8 1093 76.3
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1519.2 1097 78.0
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1516.9 1136 73.9
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 0.0e+00 1510.7 1095 75.6
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1509.2 1095 75.3
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 0.0e+00 1495.7 1098 75.6
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 0.0e+00 1484.9 868 86.2
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 0.0e+00 1484.5 1059 75.5
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 0.0e+00 1475.7 1054 76.0
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 0.0e+00 1469.9 1102 72.1
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 0.0e+00 1468.4 1098 72.3
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 0.0e+00 1467.2 976 76.4
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 0.0e+00 1464.9 869 84.3
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1464.5 1085 73.5
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1463.0 869 84.2
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1463.0 1098 73.1
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1462.6 869 84.1
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 0.0e+00 1454.5 1093 73.2
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1454.5 1046 75.5
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1449.5 1042 75.2
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 0.0e+00 1443.3 1104 75.1
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 0.0e+00 1441.8 1097 72.2
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 0.0e+00 1431.8 1103 70.7
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1431.8 1081 70.5
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1429.8 1051 75.3
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 0.0e+00 1419.1 945 76.3
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 0.0e+00 1416.4 1072 70.9
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 0.0e+00 1406.0 1094 72.1
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1404.0 945 74.7
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 0.0e+00 1404.0 945 74.2
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 0.0e+00 1403.7 1115 69.0
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 0.0e+00 1399.0 1112 70.5
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1397.9 869 81.5
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 0.0e+00 1394.4 1070 69.7
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1394.0 1089 67.7
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1394.0 1119 69.3
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1387.5 945 74.1
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 0.0e+00 1387.5 945 74.1
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1386.3 945 74.0
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 0.0e+00 1379.4 1096 68.9
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 0.0e+00 1377.8 976 73.1
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1370.5 1095 71.8
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1351.3 1105 67.1
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 0.0e+00 1350.1 1084 66.5
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1339.7 1210 62.1
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1335.1 1029 71.7
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 0.0e+00 1327.8 1057 67.8
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 0.0e+00 1309.7 1096 68.1
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1308.9 1248 59.5
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1299.3 1043 66.2
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 0.0e+00 1295.8 899 73.7
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1285.4 931 71.6
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 0.0e+00 1247.3 1074 64.2
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 0.0e+00 1190.6 880 66.6
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 0.0e+00 1169.1 939 64.2
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 0.0e+00 1115.5 1054 58.6
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 0.0e+00 1098.6 692 80.1
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 0.0e+00 1098.2 690 80.1
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 6.7e-311 1070.8 1053 59.2
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 1.6e-275 953.4 1093 53.9
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 2.2e-269 932.9 690 70.7
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 1.4e-268 930.2 744 62.0
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 5.2e-263 911.8 546 83.0
CARHR103800 Cardamine hirsuta HOM05D003881 ORTHO05D004343 5.6e-249 865.1 627 71.3
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 4.0e-199 699.5 571 63.9
TAR383G0300 Trochodendron aralioides HOM05D003881 ORTHO05D004343 2.0e-190 670.6 517 76.8
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 7.2e-164 582.4 448 71.9
CARHR103810 Cardamine hirsuta HOM05D003881 ORTHO05D004343 1.4e-154 551.6 318 85.5
Sopen07g021070 Solanum pennellii HOM05D003881 ORTHO05D004343 1.6e-131 474.9 401 73.3
Peaxi162Scf00127g00018 Petunia axillaris HOM05D003881 ORTHO05D004343 1.4e-127 461.8 388 73.2
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 1.2e-123 448.7 346 62.1
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.9e-117 427.2 450 54.2
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 5.1e-93 347.1 276 74.3
SHI23794 Sapria himalayana HOM05D003881 ORTHO05D004343 1.4e-90 339.0 324 57.1
Psat4g185720 Pisum sativum HOM05D003881 ORTHO05D004343 1.1e-87 329.3 198 84.3
MCO14G023 Micromonas commoda HOM05D003881 ORTHO05D004343 7.1e-87 326.6 1017 26.9
QL01p053501 Quercus lobata HOM05D003881 ORTHO05D004343 1.5e-81 308.9 233 67.8
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 3.5e-78 297.7 230 65.7
Cre03.g189605 Chlamydomonas reinhardtii HOM05D003881 ORTHO05D004343 2.8e-75 288.1 1019 26.0
Zm00001eb329800 Zea mays HOM05D003881 ORTHO05D004343 2.7e-62 245.0 190 64.7
ATR0684G009 Amborella trichopoda HOM05D003881 ORTHO05D004343 7.9e-62 243.4 384 39.8
SEGI_33062 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 7.9e-54 216.9 149 69.1
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 1.3e-51 209.5 110 88.2
CSS0024068 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 9.4e-47 193.4 99 92.9
Thhalv10002929m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 1.8e-45 189.1 211 49.8
MD15G1215900 Malus domestica HOM05D003881 ORTHO05D004343 1.3e-43 183.0 243 48.6
ATR0193G014 Amborella trichopoda HOM05D003881 ORTHO05D004343 3.7e-43 181.4 107 84.1
ATR0193G031 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.4e-42 178.7 108 79.6
Lsat_1_v5_gn_3_15640 Lactuca sativa HOM05D003881 ORTHO05D004343 7.0e-42 177.2 103 78.6
HPP92_012481 Vanilla planifolia HOM05D003881 ORTHO05D004343 5.9e-41 174.1 149 62.4
CBR_g74627 Chara braunii HOM05D003881 ORTHO05D004343 1.0e-37 163.3 222 42.3
Psat1g224080 Pisum sativum HOM05D003881 ORTHO05D004343 2.3e-37 162.2 89 87.6
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 5.2e-37 161.0 484 28.5
Psat0s7528g0040 Pisum sativum HOM05D003881 ORTHO05D004343 2.9e-32 145.2 150 56.0
Psat1g059560 Pisum sativum HOM05D003881 ORTHO05D004343 1.9e-31 142.5 150 55.3
vmacro22673 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 2.1e-30 139.0 292 39.7
ATR0684G059 Amborella trichopoda HOM05D003881 ORTHO05D004343 3.0e-29 135.2 93 74.2
Psat1g034120 Pisum sativum HOM05D003881 ORTHO05D004343 2.6e-28 132.1 86 79.1
Hma1.2p1_0528F.1_g173040 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 4.1e-26 124.8 108 60.2
Hma1.2p1_0980F.1_g243635 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 4.1e-26 124.8 108 60.2
Hma1.2p1_1385F.1_g279633 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 4.1e-26 124.8 108 60.2
SEGI_35060 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 3.5e-25 121.7 121 52.9
SEGI_29160 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.8e-24 118.2 119 51.3
HPP92_006870 Vanilla planifolia HOM05D003881 ORTHO05D004343 6.6e-24 117.5 219 40.6
Hma1.2p1_0508F.1_g168780 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 4.3e-23 114.8 79 65.8
HPP92_006853 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.6e-22 112.8 74 74.3
Actinidia38472 Actinidia chinensis HOM05D003881 ORTHO05D004343 2.1e-22 112.5 237 34.2
Hma1.2p1_0430F.1_g151320 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 1.2e-20 106.7 62 77.4
Rhsim03G0229000 Rhododendron simsii HOM05D003881 ORTHO05D004343 1.2e-20 106.7 97 66.0
SEGI_23032 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 9.8e-20 103.6 67 74.6
SEGI_26438 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.2e-17 96.7 59 78.0
SEGI_15507 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.0e-17 95.9 79 58.2
SEGI_11752 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.5e-17 95.1 147 40.8
HPP92_028483 Vanilla planifolia HOM05D003881 ORTHO05D004343 7.8e-17 94.0 61 65.6
HPP92_012555 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.0e-16 93.6 187 39.0
TPR.G10985 Trifolium pratense HOM05D003881 ORTHO05D004343 8.6e-16 90.5 47 97.9
RcHm_v2.0_Chr5g0007121 Rosa chinensis HOM05D003881 ORTHO05D004343 1.1e-15 90.1 51 82.4
SEGI_39855 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 8.9e-13 80.5 64 62.5
Psat6g098400 Pisum sativum HOM05D003881 ORTHO05D004343 2.6e-12 79.0 63 63.5
CBR_g74625 Chara braunii HOM05D003881 ORTHO05D004343 4.1e-10 71.6 66 56.1
PGSC0003DMG400019565 Solanum tuberosum HOM05D003881 ORTHO05D004343 7.0e-10 70.9 89 52.8
AUR62025190 Chenopodium quinoa HOM05D003881 ORTHO05D004343 9.2e-10 70.5 111 40.5
Actinidia38474 Actinidia chinensis HOM05D003881 ORTHO05D004343 7.8e-09 67.4 53 67.9
BolC7t41346H Brassica oleracea HOM05D003881 ORTHO05D004343 1.1e-07 63.5 60 55.0
C07p09280 Brassica napus HOM05D003881 ORTHO05D004343 2.8e-06 58.9 60 51.7
Glyma.18G270500 Glycine max HOM05D000415 ORTHO05D011841 2.8e-06 58.9 71 47.9
A07p06220 Brassica napus HOM05D003881 ORTHO05D004343 4.7e-06 58.2 60 51.7
SEGI_25641 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 6.2e-06 57.8 38 73.7
SEGI_10645 Sequoiadendron giganteum HOM05D000563 ORTHO05D006573 8.1e-06 57.4 48 52.1
SEGI_17061 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 8.1e-06 57.4 45 62.2


User provided reference genes

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