Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 0.0e+00 1295.4 647 100.0
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 1.1e-241 840.1 650 65.1
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 9.6e-241 837.0 652 64.9
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 2.1e-240 835.9 656 66.3
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 4.6e-235 818.1 649 66.1
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 9.6e-233 810.4 663 63.5
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 3.1e-231 805.4 650 63.8
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 8.7e-226 787.3 650 61.4
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 1.9e-225 786.2 657 63.5
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 1.6e-224 783.1 652 62.0
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 8.5e-221 770.8 654 61.2
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 1.1e-220 770.4 701 59.2
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 5.5e-220 768.1 654 60.9
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 1.9e-217 759.6 646 60.2
Gohir.A12G195100 Gossypium hirsutum HOM05D007228 ORTHO05D009099 5.5e-212 741.5 638 60.7
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 1.2e-211 740.3 633 60.8
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 3.2e-204 715.7 686 56.6
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 2.0e-201 706.4 654 56.3
Rhsim08G0200200 Rhododendron simsii HOM05D007228 ORTHO05D009099 1.7e-200 703.4 675 56.9
FvH4_5g10000 Fragaria vesca HOM05D007228 ORTHO05D009099 8.2e-200 701.0 657 54.9
FAN04G0692 Fragaria x ananassa HOM05D007228 ORTHO05D009099 7.0e-199 698.0 633 55.6
FAN18G1110 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.6e-198 696.0 654 54.9
Lj4g0027006 Lotus japonicus HOM05D007228 ORTHO05D009099 1.0e-197 694.1 655 55.6
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 8.5e-197 691.0 657 54.3
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 2.5e-196 689.5 658 56.4
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 4.2e-196 688.7 658 54.1
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 1.6e-195 686.8 658 54.1
Manes.14G042701 Manihot esculenta HOM05D007228 ORTHO05D009099 2.1e-195 686.4 657 55.4
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 1.3e-192 677.2 663 55.7
arahy.Tifrunner.gnm1.ann1.E4K3LT Arachis hypogaea HOM05D007228 ORTHO05D009099 6.3e-192 674.9 659 54.2
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 1.4e-191 673.7 654 54.7
FAN08G0661 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.4e-191 672.9 631 54.7
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 9.1e-191 671.0 743 50.5
arahy.Tifrunner.gnm1.ann1.RK1GDQ Arachis hypogaea HOM05D007228 ORTHO05D009099 2.7e-190 669.5 659 53.7
Ca_16830_v3 Cicer arietinum L. HOM05D007228 ORTHO05D009099 1.0e-189 667.5 654 53.8
Medtr8g095540 Medicago truncatula HOM05D007228 ORTHO05D009099 1.3e-189 667.2 654 53.7
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 8.5e-189 664.5 772 49.2
AL6G17680 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 7.2e-188 661.4 649 53.2
CARHR205770 Cardamine hirsuta HOM05D007228 ORTHO05D009099 1.6e-187 660.2 655 53.7
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 8.0e-187 657.9 591 56.2
Sabra15G0131800 Salix brachista HOM05D007228 ORTHO05D009099 7.5e-185 651.4 593 58.2
AT5G07380 Arabidopsis thaliana HOM05D007228 ORTHO05D009099 9.8e-185 651.0 650 53.4
THA.LOC104819419 Tarenaya hassleriana HOM05D007228 ORTHO05D009099 2.8e-184 649.4 655 53.4
BraA10t44962Z Brassica rapa HOM05D007228 ORTHO05D009099 4.5e-182 642.1 658 52.1
Cc04_g05590 Coffea canephora HOM05D007228 ORTHO05D009099 5.9e-182 641.7 638 54.1
Carub.0006s0635 Capsella rubella HOM05D007228 ORTHO05D009099 1.0e-181 641.0 653 51.6
RcHm_v2.0_Chr7g0188261 Rosa chinensis HOM05D007228 ORTHO05D009099 1.7e-181 640.2 591 55.8
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 2.3e-181 639.8 663 53.2
Thhalv10012911m.g Eutrema salsugineum HOM05D007228 ORTHO05D009099 2.9e-181 639.4 653 52.8
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 6.6e-181 638.3 662 51.7
C09p69520 Brassica napus HOM05D007228 ORTHO05D009099 1.5e-180 637.1 657 51.9
BolC9t59696H Brassica oleracea HOM05D007228 ORTHO05D009099 1.9e-180 636.7 657 51.9
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 3.3e-180 636.0 658 52.1
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 3.6e-179 632.5 591 57.0
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 5.2e-178 628.6 648 51.7
A10p29130 Brassica napus HOM05D007228 ORTHO05D009099 1.2e-177 627.5 658 51.4
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 3.4e-177 625.9 883 42.8
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 1.1e-175 620.9 488 64.5
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 5.4e-175 618.6 526 61.2
BcaC06g32443 Brassica carinata HOM05D007228 ORTHO05D009099 7.0e-175 618.2 656 50.8
vmacro19097 Vaccinium macrocarpon HOM05D007228 ORTHO05D009099 1.3e-173 614.0 493 63.7
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 7.3e-172 608.2 674 49.6
Psat7g040280 Pisum sativum HOM05D007228 ORTHO05D009099 1.4e-170 604.0 658 50.2
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 1.2e-169 600.9 664 50.3
Lsat_1_v5_gn_1_30460 Lactuca sativa HOM05D007228 ORTHO05D009099 2.9e-168 596.3 598 53.2
Thecc.03G143400 Theobroma cacao HOM05D007228 ORTHO05D009099 1.7e-165 587.0 420 68.3
Phvul.002G279800 Phaseolus vulgaris HOM05D007228 ORTHO05D009099 2.3e-165 586.6 656 49.7
CSS0045118 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 6.6e-165 585.1 471 62.8
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 1.7e-160 570.5 649 49.8
TAR629G1179 Trochodendron aralioides HOM05D007228 ORTHO05D009099 6.4e-160 568.5 457 64.3
Aa31LG3G18990 Aethionema arabicum HOM05D007228 ORTHO05D009099 1.4e-159 567.4 648 48.1
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 1.3e-157 560.8 654 46.9
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 5.1e-157 558.9 663 47.7
TPR.G12794 Trifolium pratense HOM05D007228 ORTHO05D009099 6.8e-154 548.5 558 51.6
HanXRQChr08g0229031 Helianthus annuus HOM05D007228 ORTHO05D009099 1.9e-151 540.4 514 54.9
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 5.6e-148 528.9 704 46.4
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 4.2e-143 512.7 587 47.5
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 8.7e-141 505.0 704 42.9
Eucgr.E04338 Eucalyptus grandis HOM05D007228 ORTHO05D009099 2.5e-140 503.4 663 44.6
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 2.4e-135 486.9 700 41.7
PGR142G1350 Punica granatum HOM05D007228 ORTHO05D009099 2.1e-134 483.8 687 42.2
EL10Ac5g11261 Beta vulgaris HOM05D007228 ORTHO05D009099 2.1e-131 473.8 676 44.5
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 3.6e-131 473.0 481 52.0
GSVIVG01035283001 Vitis vinifera HOM05D007228 ORTHO05D009099 8.4e-120 435.3 254 85.4
Hund02521 Selenicereus undatus HOM05D007228 ORTHO05D009099 2.4e-114 417.2 798 36.7
AUR62036968 Chenopodium quinoa HOM05D007228 ORTHO05D009099 1.1e-111 408.3 645 40.0
Sc04g0000080 Simmondsia chinensis HOM05D007228 ORTHO05D009099 2.3e-109 400.6 501 46.1
Sc04g0000120 Simmondsia chinensis HOM05D007228 ORTHO05D009099 3.9e-109 399.8 501 46.1
Ah.02g114480 Amaranthus hybridus HOM05D003541 ORTHO05D004095 3.8e-104 383.3 686 38.6
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 3.4e-97 360.1 485 43.3
AUR62032199 Chenopodium quinoa HOM05D007228 ORTHO05D009099 5.5e-95 352.8 666 35.9
PGSC0003DMG400014227 Solanum tuberosum HOM05D007228 ORTHO05D009099 1.6e-94 351.3 372 52.4
unitig_747.g21316 Utricularia gibba HOM05D002839 ORTHO05D003349 7.7e-89 332.4 471 42.9
CSS0001938 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 3.3e-84 317.0 262 61.1
Lalb_Chr12g0202641 Lupinus albus HOM05D007228 ORTHO05D009099 5.0e-72 276.6 258 54.7
SMO119G0281 Selaginella moellendorffii HOM05D007228 ORTHO05D009099 1.5e-68 265.0 518 32.8
HPP92_021579 Vanilla planifolia HOM05D007228 ORTHO05D009099 2.2e-59 234.6 378 41.3
Psat0s3642g0120 Pisum sativum HOM05D007228 ORTHO05D009099 7.3e-55 219.5 372 39.0
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 1.2e-54 218.8 375 37.9
Lalb_Chr12g0202651 Lupinus albus HOM05D007228 ORTHO05D009099 5.2e-53 213.4 196 56.6
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 7.8e-41 172.9 186 49.5
AagrBONN_evm.TU.Sc2ySwM_344.3780 Anthoceros agrestis HOM05D007228 ORTHO05D009099 8.1e-38 162.9 274 36.1
MSTRG.9383 Avicennia marina HOM05D007228 ORTHO05D009099 1.4e-37 162.2 194 49.0
AUR62009120 Chenopodium quinoa HOM05D007228 ORTHO05D009099 3.4e-36 157.5 477 30.6
TPR.G21492 Trifolium pratense HOM05D007228 ORTHO05D009099 9.9e-36 156.0 198 43.4
Psat0s5010g0080 Pisum sativum HOM05D005021 ORTHO05D006824 1.9e-34 151.8 170 47.6
HanXRQChr08g0229021 Helianthus annuus HOM05D007228 ORTHO05D009099 2.1e-33 148.3 129 58.1
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 6.8e-29 133.3 350 29.4
Lalb_Chr12g0202661 Lupinus albus HOM05D007228 ORTHO05D009099 6.6e-24 116.7 168 45.2
CDE06G2808 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 5.6e-23 113.6 508 22.6
AL468U10020 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 5.4e-18 97.1 94 54.3
HPP92_021580 Vanilla planifolia HOM05D007228 ORTHO05D009099 1.5e-15 89.0 147 36.1
Sp6g35490 Schrenkiella parvula HOM05D007228 ORTHO05D009099 6.9e-13 80.1 138 39.9
CDE02G0692 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 1.7e-11 75.5 92 39.1
SEGI_40191 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 1.3e-08 65.9 52 59.6


User provided reference genes

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