Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 0.0e+00 1576.2 821 100.0
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 1.4e-180 637.5 1048 42.1
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 9.2e-172 608.2 998 42.6
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 1.6e-171 607.4 997 42.2
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 1.0e-170 604.7 1004 41.1
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.2e-166 591.3 1020 40.4
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.3e-165 587.8 1020 40.3
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 9.2e-164 581.6 982 42.6
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.9e-161 573.9 931 42.1
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.8e-159 567.4 931 42.2
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 8.9e-159 565.1 931 41.7
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 2.0e-158 563.9 964 41.0
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 2.2e-157 560.5 1045 39.9
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 2.9e-157 560.1 930 41.8
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 2.3e-154 550.4 852 44.6
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 1.5e-150 537.7 892 41.1
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 2.0e-150 537.3 988 38.9
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 8.4e-149 531.9 986 39.7
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 3.2e-148 530.0 965 40.4
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 5.4e-148 529.3 974 39.8
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 1.7e-146 524.2 1016 38.7
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 2.5e-145 520.4 883 41.6
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 4.8e-144 516.2 856 41.6
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 4.0e-143 513.1 993 39.4
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 5.3e-143 512.7 1031 38.3
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 1.5e-142 511.1 978 39.1
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 1.3e-141 508.1 926 41.1
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 1.4e-140 504.6 949 40.5
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 3.2e-140 503.4 983 39.1
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 5.5e-140 502.7 984 38.4
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 4.6e-139 499.6 978 38.4
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 1.8e-138 497.7 949 39.9
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 2.3e-138 497.3 954 40.1
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 2.8e-136 490.3 960 39.0
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 4.5e-134 483.0 885 39.3
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 5.8e-134 482.6 851 40.0
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 4.2e-132 476.5 861 39.8
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 4.6e-131 473.0 987 37.8
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 1.3e-130 471.5 989 36.8
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 1.1e-129 468.4 953 38.3
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 1.1e-129 468.4 1097 34.4
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 5.7e-129 466.1 950 38.7
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 3.7e-128 463.4 974 37.4
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 8.2e-128 462.2 1002 36.3
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 1.4e-127 461.5 960 37.2
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 5.9e-126 456.1 963 35.9
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 7.6e-126 455.7 960 36.0
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 5.0e-125 453.0 975 37.6
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 7.2e-124 449.1 965 36.3
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 2.1e-123 447.6 771 40.9
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 2.7e-123 447.2 997 36.6
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 1.3e-122 444.9 980 35.9
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 1.8e-122 444.5 986 36.9
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 3.0e-122 443.7 984 35.5
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 8.7e-122 442.2 988 36.4
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 1.9e-121 441.0 970 36.6
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 2.5e-121 440.7 953 38.1
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 5.7e-121 439.5 880 37.6
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 1.1e-119 435.3 1013 36.0
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 6.5e-117 426.0 989 35.7
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 7.2e-116 422.5 1000 35.2
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 3.6e-115 420.2 953 36.4
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 3.0e-114 417.2 972 35.2
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 1.1e-113 415.2 846 37.4
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 1.7e-112 411.4 1025 34.0
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 4.1e-111 406.8 857 37.5
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 1.5e-110 404.8 950 35.6
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 2.0e-110 404.4 982 34.7
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 3.8e-109 400.2 954 35.3
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 1.9e-108 397.9 942 35.7
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 7.9e-107 392.5 1002 33.6
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 1.5e-105 388.3 965 34.0
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 1.3e-104 385.2 863 36.3
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 3.7e-104 383.6 839 36.9
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 1.1e-103 382.1 1022 33.1
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 1.1e-103 382.1 824 37.0
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 1.1e-103 382.1 862 35.6
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 1.4e-103 381.7 1016 34.5
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 4.1e-103 380.2 934 35.1
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 4.1e-103 380.2 936 34.6
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 1.2e-102 378.6 799 37.3
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 5.9e-102 376.3 953 34.7
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 5.0e-101 373.2 857 36.2
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 1.1e-100 372.1 934 34.8
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 2.3e-98 364.4 1012 31.9
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 2.8e-96 357.5 961 33.4
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 4.8e-96 356.7 748 36.5
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 1.4e-95 355.1 945 34.5
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 1.8e-95 354.8 808 35.3
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 2.0e-94 351.3 1078 32.4
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 3.5e-94 350.5 1024 31.7
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 1.2e-91 342.0 860 34.0
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 8.8e-90 335.9 891 34.2
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 7.5e-89 332.8 1056 30.3
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 1.8e-87 328.2 961 31.5
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 5.4e-87 326.6 874 33.4
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 7.7e-86 322.8 912 33.3
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 3.6e-83 313.9 931 31.4
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 6.1e-83 313.2 935 31.3
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 6.1e-83 313.2 950 30.6
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 8.0e-83 312.8 799 33.3
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 1.4e-79 302.0 796 33.7
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 7.0e-79 299.7 911 31.1
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 5.6e-76 290.0 604 36.6
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 9.5e-76 289.3 788 31.5
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 7.5e-73 279.6 925 30.6
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 7.0e-71 273.1 901 30.5
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 5.8e-65 253.4 1122 26.6
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 8.3e-64 249.6 885 29.6
CSS0028997 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 2.7e-62 244.6 443 37.0
CSS0030315 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 3.0e-61 241.1 436 37.2
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 8.6e-53 213.0 155 71.6
Actinidia00844 Actinidia chinensis HOM05D005351 ORTHO05D006542 1.4e-50 205.7 754 30.9
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 1.2e-49 202.6 246 50.4
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 4.3e-44 184.1 154 63.6
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 7.8e-38 163.3 183 54.6
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 4.2e-31 141.0 232 43.1
CiPaw.12G140800 Carya illinoinensis HOM05D005351 ORTHO05D006542 5.1e-29 134.0 141 56.0
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 4.3e-28 131.0 1038 24.9
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 1.3e-27 129.4 159 52.8
HPP92_028497 Vanilla planifolia HOM05D005351 ORTHO05D006542 9.0e-26 123.2 162 46.3
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 8.4e-24 116.7 97 66.0
Peaxi162Scf00018g00154 Petunia axillaris HOM05D005351 ORTHO05D006542 2.3e-21 108.6 76 76.3
Solyc10g005860.3 Solanum lycopersicum HOM05D005351 ORTHO05D006542 5.1e-21 107.5 70 81.4
Hma1.2p1_3473F.1_g336230 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 9.6e-20 103.2 130 50.0
Lsat_1_v5_gn_6_88041 Lactuca sativa HOM05D005351 ORTHO05D006542 8.2e-19 100.1 265 32.1
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 7.6e-17 93.6 73 61.6
PSO782G1978 Papaver somniferum HOM05D005351 ORTHO05D006542 7.6e-17 93.6 418 26.8
AagrBONN_evm.TU.Sc2ySwM_368.1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 1.7e-16 92.4 114 54.4
Hma1.2p1_3473F.1_g336240 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 6.0e-14 84.0 89 51.7
Oeu017995.1 Olea europaea HOM05D005351 ORTHO05D006542 3.9e-13 81.3 554 24.4
Cre09.g388430 Chlamydomonas reinhardtii HOM05D005351 ORTHO05D006542 2.1e-11 75.5 187 31.0
Cc00_g23250 Coffea canephora HOM05D000874 ORTHO05D001049 2.1e-06 58.9 31 74.2


User provided reference genes

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