Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014598001 Vitis vinifera HOM05D001540 ORTHO05D438178 2.4e-76 288.9 158 100.0
Haze_09606 Corylus avellana HOM05D001540 ORTHO05D001520 9.8e-14 80.9 82 54.9
Dinv22308 Davidia involucrata HOM05D001540 ORTHO05D001520 3.7e-13 79.0 83 53.0
TAR626G1457 Trochodendron aralioides HOM05D001540 ORTHO05D001520 3.7e-13 79.0 82 53.7
Actinidia35314 Actinidia chinensis HOM05D001540 ORTHO05D001520 1.1e-12 77.4 82 50.0
Lj1C863G20 Lonicera japonica HOM05D001540 ORTHO05D001520 1.4e-12 77.0 82 48.8
Hma1.2p1_0538F.1_g174370 Hydrangea macrophylla HOM05D001540 ORTHO05D001520 2.4e-12 76.3 84 51.2
QL08p013394 Quercus lobata HOM05D001540 ORTHO05D001520 3.2e-12 75.9 82 52.4
QL08p013554 Quercus lobata HOM05D001540 ORTHO05D001520 3.2e-12 75.9 82 52.4
CiPaw.11G183400 Carya illinoinensis HOM05D001540 ORTHO05D001520 7.1e-12 74.7 82 50.0
FAN16G2991 Fragaria x ananassa HOM05D001540 ORTHO05D001520 7.1e-12 74.7 82 47.6
FAN21G0746 Fragaria x ananassa HOM05D001540 ORTHO05D001520 7.1e-12 74.7 82 47.6
MD11G1227300 Malus domestica HOM05D001540 ORTHO05D001520 7.1e-12 74.7 84 52.4
RcHm_v2.0_Chr5g0037241 Rosa chinensis HOM05D001540 ORTHO05D001520 1.2e-11 73.9 82 48.8
Ciclev10007389m.g Citrus clementina HOM05D001540 ORTHO05D001520 2.1e-11 73.2 82 46.3
Prupe.4G201900 Prunus persica HOM05D001540 ORTHO05D001520 2.1e-11 73.2 84 51.2
FAN25G3568 Fragaria x ananassa HOM05D001540 ORTHO05D001520 2.7e-11 72.8 82 46.3
Potri.001G417000 Populus trichocarpa HOM05D001540 ORTHO05D001520 2.7e-11 72.8 82 50.0
vmacro09748 Vaccinium macrocarpon HOM05D001540 ORTHO05D001520 2.7e-11 72.8 81 50.6
Nn1g06996 Nelumbo nucifera HOM05D001540 ORTHO05D001520 3.5e-11 72.4 81 49.4
TWI39G1140 Tripterygium wilfordii HOM05D001540 ORTHO05D001520 3.5e-11 72.4 82 52.4
Gorai.007G314600 Gossypium raimondii HOM05D001540 ORTHO05D001520 4.6e-11 72.0 82 52.4
CSS0010177 Camellia sinensis var. sinensis HOM05D001540 ORTHO05D001520 7.8e-11 71.2 82 50.0
CSS0026650 Camellia sinensis var. sinensis HOM05D001540 ORTHO05D001520 7.8e-11 71.2 82 50.0
Manes.15G076800 Manihot esculenta HOM05D001540 ORTHO05D001520 7.8e-11 71.2 82 50.0
Sabra16G0283400 Salix brachista HOM05D001540 ORTHO05D001520 7.8e-11 71.2 83 49.4
TWI38G1832 Tripterygium wilfordii HOM05D001540 ORTHO05D001520 7.8e-11 71.2 82 51.2
Gohir.A11G280400 Gossypium hirsutum HOM05D001540 ORTHO05D001520 1.0e-10 70.9 82 51.2
TAR624G0744 Trochodendron aralioides HOM05D001540 ORTHO05D001520 1.0e-10 70.9 82 47.6
CANSAT11G2547 Cannabis sativa HOM05D001540 ORTHO05D001520 1.7e-10 70.1 83 47.0
Eucgr.F03423 Eucalyptus grandis HOM05D001540 ORTHO05D001520 1.7e-10 70.1 81 50.6
FvH4_3g21770 Fragaria vesca HOM05D001540 ORTHO05D001520 1.7e-10 70.1 83 47.0
Gohir.D11G290700 Gossypium hirsutum HOM05D001540 ORTHO05D001520 2.3e-10 69.7 82 51.2
FAN11G3615 Fragaria x ananassa HOM05D001540 ORTHO05D001520 3.0e-10 69.3 83 47.0
RhsimUnG0253300 Rhododendron simsii HOM05D001540 ORTHO05D001520 3.0e-10 69.3 82 50.0
Cpa.g.sc97.73 Carica papaya HOM05D001540 ORTHO05D001520 5.1e-10 68.6 82 50.0
Dinv03937 Davidia involucrata HOM05D001540 ORTHO05D001520 8.6e-10 67.8 82 47.6
Potri.011G132700 Populus trichocarpa HOM05D001540 ORTHO05D001520 8.6e-10 67.8 116 38.8
Sc03g0009120 Simmondsia chinensis HOM05D001540 ORTHO05D001520 8.6e-10 67.8 82 47.6
Atru.chr2.3205 Acer truncatum HOM05D001540 ORTHO05D001520 1.1e-09 67.4 82 43.9
Aqoxy4G02087 Aquilegia oxysepala HOM05D001540 ORTHO05D001520 1.5e-09 67.0 82 46.3
COL.COLO4_09563 Corchorus olitorius HOM05D001540 ORTHO05D001520 1.5e-09 67.0 82 48.8
TPR.G36798 Trifolium pratense HOM05D001540 ORTHO05D001520 1.5e-09 67.0 82 46.3
PSO541G0622 Papaver somniferum HOM05D001540 ORTHO05D001520 1.9e-09 66.6 81 45.7
Thecc.07G054500 Theobroma cacao HOM05D001540 ORTHO05D001520 1.9e-09 66.6 82 47.6
PSO675G0598 Papaver somniferum HOM05D001540 ORTHO05D001520 2.5e-09 66.2 81 44.4
Sabra11G0119500 Salix brachista HOM05D001540 ORTHO05D001520 2.5e-09 66.2 81 48.1
Oeu042914.1 Olea europaea HOM05D001540 ORTHO05D001520 3.3e-09 65.9 82 42.7
Manes.03G122700 Manihot esculenta HOM05D001540 ORTHO05D001520 4.3e-09 65.5 83 48.2
Lj3g0015626 Lotus japonicus HOM05D001540 ORTHO05D001520 5.6e-09 65.1 82 46.3
Lalb_Chr22g0357051 Lupinus albus HOM05D001540 ORTHO05D001520 9.5e-09 64.3 83 43.4
Duzib213G0680 Durio zibethinus HOM05D001540 ORTHO05D001520 1.2e-08 63.9 83 47.0
Phvul.005G091300 Phaseolus vulgaris HOM05D001540 ORTHO05D001520 1.6e-08 63.5 82 46.3
Duzib268G1066 Durio zibethinus HOM05D001540 ORTHO05D001520 2.1e-08 63.2 82 43.9
ECA246G1276 Erigeron canadensis HOM05D001540 ORTHO05D001520 2.1e-08 63.2 82 43.9
Glyma.13G287000 Glycine max HOM05D001540 ORTHO05D001520 2.1e-08 63.2 83 43.4
arahy.Tifrunner.gnm1.ann1.U6HGF1 Arachis hypogaea HOM05D001540 ORTHO05D001520 3.6e-08 62.4 82 43.9
MSTRG.12955 Avicennia marina HOM05D001540 ORTHO05D001520 3.6e-08 62.4 82 42.7
Nitab4.5_0000092g0040 Nicotiana tabacum HOM05D001540 ORTHO05D001520 3.6e-08 62.4 82 41.5
arahy.Tifrunner.gnm1.ann1.C2FWCT Arachis hypogaea HOM05D001540 ORTHO05D001520 4.7e-08 62.0 82 42.7
MD03G1212200 Malus domestica HOM05D001540 ORTHO05D001520 4.7e-08 62.0 82 45.1
Migut.H01859 Erythranthe guttata HOM05D001540 ORTHO05D001520 6.2e-08 61.6 81 44.4
Gohir.A01G074300 Gossypium hirsutum HOM05D001540 ORTHO05D001520 6.2e-08 61.6 81 42.0
Gohir.D01G060800 Gossypium hirsutum HOM05D001540 ORTHO05D001520 6.2e-08 61.6 81 43.2
Gorai.002G082200 Gossypium raimondii HOM05D001540 ORTHO05D001520 6.2e-08 61.6 81 43.2
Nitab4.5_0000749g0010 Nicotiana tabacum HOM05D001540 ORTHO05D001520 6.2e-08 61.6 82 41.5
Lj8A165T111 Lonicera japonica HOM05D001540 ORTHO05D001520 8.1e-08 61.2 81 45.7
Nitab4.5_0002238g0080 Nicotiana tabacum HOM05D001540 ORTHO05D001520 8.1e-08 61.2 82 42.7
PGR031G2196 Punica granatum HOM05D001540 ORTHO05D001520 8.1e-08 61.2 84 48.8
Nitab4.5_0000397g0080 Nicotiana tabacum HOM05D001540 ORTHO05D001520 1.1e-07 60.8 82 42.7
Psat5g249880 Pisum sativum HOM05D001540 ORTHO05D001520 1.1e-07 60.8 82 43.9
CiPaw.12G126300 Carya illinoinensis HOM05D001540 ORTHO05D001520 1.8e-07 60.1 82 39.0
Nn1g03665 Nelumbo nucifera HOM05D001540 ORTHO05D001520 1.8e-07 60.1 81 42.0
Cc05_g13210 Coffea canephora HOM05D001540 ORTHO05D001520 2.3e-07 59.7 81 39.5
SalBow7G2055 Salvia bowleyana HOM05D001540 ORTHO05D001520 2.3e-07 59.7 82 42.7
DCAR_022522 Daucus carota HOM05D001540 ORTHO05D001520 3.1e-07 59.3 82 43.9
Medtr2g082770 Medicago truncatula HOM05D001540 ORTHO05D001520 3.1e-07 59.3 80 42.5
CAN.G337.152 Capsicum annuum HOM05D001540 ORTHO05D001520 4.0e-07 58.9 83 42.2
Glyma.12G214600 Glycine max HOM05D001540 ORTHO05D001520 4.0e-07 58.9 82 42.7
Peaxi162Scf01086g00110 Petunia axillaris HOM05D001540 ORTHO05D001520 4.0e-07 58.9 86 43.0
HanXRQChr05g0159231 Helianthus annuus HOM05D001540 ORTHO05D001520 5.2e-07 58.5 82 40.2
Ca_01755_v3 Cicer arietinum L. HOM05D001540 ORTHO05D001520 6.8e-07 58.2 81 42.0
Ca_01760_v3 Cicer arietinum L. HOM05D001540 ORTHO05D001520 6.8e-07 58.2 81 42.0
Lalb_Chr14g0366091 Lupinus albus HOM05D001540 ORTHO05D001520 6.8e-07 58.2 83 41.0
Sed0020701 Sechium edule HOM05D001540 ORTHO05D001520 6.8e-07 58.2 81 40.7
Phvul.011G140900 Phaseolus vulgaris HOM05D001540 ORTHO05D001520 1.2e-06 57.4 82 41.5
MELO3C018126.2 Cucumis melo HOM05D001540 ORTHO05D001520 2.0e-06 56.6 82 42.7
MBI02_g18407_MAGBIO Magnolia biondii HOM05D001540 ORTHO05D001520 2.0e-06 56.6 82 42.7
Glyma.12G136000 Glycine max HOM05D001540 ORTHO05D001520 2.6e-06 56.2 82 46.3
VMungo1080G1382 Vigna mungo HOM05D001540 ORTHO05D001520 3.4e-06 55.8 82 43.9
Solyc07g064060.3 Solanum lycopersicum HOM05D001540 ORTHO05D001520 7.6e-06 54.7 82 40.2
Sopen07g032200 Solanum pennellii HOM05D001540 ORTHO05D001520 7.6e-06 54.7 82 40.2


User provided reference genes

Program Settings