Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 2.7e-172 608.6 313 100.0
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 7.7e-119 431.0 343 69.4
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 1.3e-118 430.3 339 66.7
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 3.8e-118 428.7 343 69.1
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 5.0e-118 428.3 338 66.6
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 8.8e-115 417.5 347 66.0
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 3.7e-113 412.1 347 65.4
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 1.8e-112 409.8 341 65.1
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 6.5e-110 401.4 346 65.0
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 7.2e-109 397.9 346 64.5
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 6.1e-108 394.8 343 64.4
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 3.0e-107 392.5 340 62.1
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 4.0e-107 392.1 343 61.8
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 8.8e-107 391.0 343 61.8
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 1.3e-105 387.1 351 62.1
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 3.7e-105 385.6 339 63.4
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 6.3e-105 384.8 340 62.9
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 1.4e-104 383.6 351 61.8
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 3.1e-104 382.5 340 62.1
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 1.6e-103 380.2 351 60.7
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 7.7e-103 377.9 341 61.6
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 1.0e-102 377.5 341 61.0
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 9.4e-101 370.9 343 58.6
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 1.2e-100 370.5 340 60.3
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.0e-99 367.5 344 57.8
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.0e-99 367.5 344 57.8
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 1.0e-99 367.5 343 59.8
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 4.0e-99 365.5 340 60.3
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 8.8e-99 364.4 340 60.3
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 8.8e-99 364.4 338 58.6
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 3.4e-98 362.5 348 59.8
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 2.8e-97 359.4 342 58.8
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 4.8e-97 358.6 345 59.1
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 6.3e-97 358.2 347 57.6
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 1.1e-96 357.5 343 58.6
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.1e-96 357.5 282 65.2
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 3.1e-96 355.9 343 58.6
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 3.1e-96 355.9 347 59.1
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 4.1e-96 355.5 354 57.1
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 1.2e-95 354.0 275 67.3
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 2.0e-95 353.2 342 58.5
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 3.5e-95 352.4 342 58.5
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 3.5e-95 352.4 342 58.5
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 1.0e-94 350.9 345 57.7
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 1.3e-94 350.5 317 61.2
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 2.9e-94 349.4 345 56.8
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 6.6e-94 348.2 341 58.1
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 1.1e-93 347.4 347 58.2
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 2.1e-92 343.2 290 62.8
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 4.7e-92 342.0 346 54.3
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 4.7e-92 342.0 340 58.5
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 2.3e-91 339.7 341 56.6
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 6.8e-91 338.2 346 55.5
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 6.8e-91 338.2 343 57.7
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 1.2e-90 337.4 353 54.7
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 4.4e-90 335.5 343 56.0
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 4.4e-90 335.5 343 56.9
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 5.7e-90 335.1 345 56.5
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 7.5e-90 334.7 344 55.8
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 7.5e-90 334.7 342 57.0
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 9.8e-90 334.3 344 54.1
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 3.7e-89 332.4 343 53.6
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 1.8e-88 330.1 281 61.2
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 2.4e-88 329.7 342 55.6
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 1.6e-87 327.0 342 55.8
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 1.3e-86 323.9 344 54.1
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 1.9e-85 320.1 273 65.2
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 1.4e-83 313.9 339 53.7
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 8.3e-81 304.7 276 56.9
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 1.5e-77 293.9 347 50.1
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 1.9e-77 293.5 348 50.3
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 2.5e-77 293.1 348 50.0
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 1.2e-76 290.8 355 49.3
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 2.8e-76 289.7 347 49.9
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 1.1e-75 287.7 341 50.4
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 1.4e-75 287.3 347 49.6
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 5.2e-75 285.4 350 49.4
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 1.2e-74 284.3 349 49.0
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 1.5e-74 283.9 348 48.6
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 3.4e-74 282.7 347 49.6
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 3.4e-74 282.7 346 48.3
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 3.4e-74 282.7 346 48.3
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 2.9e-73 279.6 280 55.7
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 1.0e-70 271.2 281 51.6
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 1.3e-70 270.8 346 48.6
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 3.7e-65 252.7 349 45.8
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 3.2e-64 249.6 307 50.5
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 1.6e-63 247.3 289 46.7
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 3.3e-61 239.6 229 57.6
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 4.3e-61 239.2 180 63.9
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 2.6e-58 229.9 314 42.7
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 1.4e-56 224.2 204 59.8
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 8.7e-54 214.9 296 44.6
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 2.2e-41 173.7 267 36.3
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 1.1e-35 154.8 133 61.7
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 4.6e-31 139.4 114 64.0
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 1.8e-30 137.5 224 44.6
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 2.5e-29 133.7 120 56.7
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 9.6e-29 131.7 133 50.4
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 9.0e-27 125.2 240 37.9
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 3.8e-25 119.8 263 31.2
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 2.5e-24 117.1 114 54.4
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 2.3e-22 110.5 285 31.6
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 7.9e-15 85.5 106 42.5
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 5.7e-13 79.3 224 27.7


User provided reference genes

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