Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 5.5e-251 870.5 456 100.0
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 8.3e-122 441.4 447 58.2
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 1.1e-100 371.3 484 50.0
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 3.1e-100 369.8 470 48.3
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 2.3e-95 353.6 451 50.8
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 2.8e-93 346.7 367 56.4
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 1.4e-92 344.4 445 50.1
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 1.8e-92 344.0 442 49.1
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 6.0e-88 328.9 467 48.6
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 2.3e-87 327.0 442 50.7
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 2.3e-87 327.0 451 48.6
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 2.5e-86 323.6 465 47.3
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 9.6e-86 321.6 421 50.1
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 6.2e-85 318.9 426 49.1
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 1.8e-84 317.4 456 47.8
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 4.0e-84 316.2 447 48.8
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 1.5e-83 314.3 487 45.4
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 9.9e-83 311.6 455 48.6
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 2.2e-82 310.5 437 49.4
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 7.1e-81 305.4 454 46.5
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 3.5e-80 303.1 464 46.3
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 1.0e-79 301.6 459 46.8
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 5.1e-79 299.3 454 46.3
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 6.6e-79 298.9 452 46.7
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 6.6e-79 298.9 433 48.5
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 4.3e-78 296.2 449 49.2
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.3e-78 296.2 445 47.2
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.3e-78 296.2 457 46.4
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.0e-75 287.3 457 45.7
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 2.6e-75 287.0 433 46.9
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 3.4e-75 286.6 433 47.6
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 7.6e-75 285.4 525 43.6
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 2.7e-72 276.9 452 41.8
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 7.9e-72 275.4 479 41.1
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 1.9e-62 244.2 440 42.3
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 9.6e-62 241.9 403 41.4
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 2.4e-60 237.3 429 42.9
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 6.9e-60 235.7 374 48.1
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 9.0e-60 235.3 478 38.9
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 2.6e-59 233.8 357 47.1
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 2.5e-54 217.2 456 38.6
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 6.3e-53 212.6 391 40.7
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 1.8e-52 211.1 423 41.6
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 1.3e-50 204.9 333 44.4
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 1.3e-50 204.9 333 44.4
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 8.5e-42 175.6 454 35.7
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.5e-41 174.1 492 34.1
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 4.2e-41 173.3 406 36.0
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 9.4e-41 172.2 472 32.8
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 3.0e-39 167.2 330 42.4
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 3.0e-39 167.2 443 36.3
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 6.7e-39 166.0 388 38.7
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 8.2e-37 159.1 450 32.7
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 1.4e-36 158.3 440 35.7
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 1.8e-36 157.9 492 32.7
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 1.8e-36 157.9 481 32.8
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 5.3e-36 156.4 500 32.2
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 7.0e-36 156.0 507 31.6
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 2.0e-35 154.5 260 43.8
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 5.9e-35 152.9 484 32.0
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 7.7e-35 152.5 270 39.3
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 5.0e-34 149.8 438 33.6
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 5.0e-34 149.8 456 30.9
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 1.1e-33 148.7 397 34.0
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 1.9e-33 147.9 590 29.8
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 5.5e-33 146.4 397 33.8
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 9.4e-33 145.6 507 30.2
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 1.6e-32 144.8 417 34.8
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 1.8e-31 141.4 492 30.3
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 5.2e-31 139.8 422 30.8
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 6.7e-31 139.4 439 33.9
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 2.0e-30 137.9 468 32.3
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 4.8e-29 133.3 449 31.8
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 2.9e-26 124.0 486 27.8
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 2.6e-22 110.9 412 31.6
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 1.1e-20 105.5 436 29.4
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 3.5e-19 100.5 356 31.7
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 9.4e-17 92.4 101 49.5
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 1.5e-09 68.6 89 43.8
AagrBONN_evm.TU.Sc2ySwM_228.932 Anthoceros agrestis HOM05D020562 ORTHO05D009990 1.6e-08 65.1 46 58.7


User provided reference genes

Program Settings